Basic Information

Insect: Toxorhynchites rutilus
Gene Symbol: -
Assembly: GCA_029784135.1
Location: CM056649.1:23341241-23351735[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.57 65 5.9 3.3 1 23 180 204 180 204 0.90

2 14 0.0011 0.12 14.5 1.1 1 22 243 264 243 264 0.95

3 14 0.012 1.3 11.2 0.9 1 20 323 342 323 343 0.96

4 14 4.6 5.3e+02 3.0 0.3 2 15 463 476 462 482 0.84

5 14 0.27 31 6.9 0.4 1 23 490 512 490 512 0.97

6 14 0.033 3.8 9.8 4.5 1 20 570 589 570 591 0.95

7 14 0.2 23 7.3 1.8 2 23 721 743 721 743 0.95

8 14 6.9 7.9e+02 2.5 4.0 2 23 824 846 823 846 0.94

9 14 0.00012 0.013 17.5 0.3 2 21 859 878 858 879 0.93

10 14 0.9 1e+02 5.3 0.0 1 20 886 907 886 909 0.93

11 14 0.00027 0.031 16.3 1.4 1 23 927 951 927 951 0.93

12 14 0.013 1.4 11.1 0.4 1 20 966 985 966 986 0.97

13 14 2.5 2.8e+02 3.9 0.1 1 23 1045 1068 1045 1068 0.93

14 14 0.00021 0.024 16.7 1.8 1 23 1074 1096 1074 1096 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.57	65	5.9	3.3	1	23	180	204	180	204	0.90
2	14	0.0011	0.12	14.5	1.1	1	22	243	264	243	264	0.95
3	14	0.012	1.3	11.2	0.9	1	20	323	342	323	343	0.96
4	14	4.6	5.3e+02	3.0	0.3	2	15	463	476	462	482	0.84
5	14	0.27	31	6.9	0.4	1	23	490	512	490	512	0.97
6	14	0.033	3.8	9.8	4.5	1	20	570	589	570	591	0.95
7	14	0.2	23	7.3	1.8	2	23	721	743	721	743	0.95
8	14	6.9	7.9e+02	2.5	4.0	2	23	824	846	823	846	0.94
9	14	0.00012	0.013	17.5	0.3	2	21	859	878	858	879	0.93
10	14	0.9	1e+02	5.3	0.0	1	20	886	907	886	909	0.93
11	14	0.00027	0.031	16.3	1.4	1	23	927	951	927	951	0.93
12	14	0.013	1.4	11.1	0.4	1	20	966	985	966	986	0.97
13	14	2.5	2.8e+02	3.9	0.1	1	23	1045	1068	1045	1068	0.93
14	14	0.00021	0.024	16.7	1.8	1	23	1074	1096	1074	1096	0.97

Sequence Information

Coding Sequence: ATGGAAGAGTTTTGTCGTATTTGCTCCCGTGCCGATGATTTCCGAAGTTTCGTGTTGACGACGGTCTCACAAGCCACCGATGTTAAAATTGACGATATGTTAATTTACTGCACACAGTTAGAGATTTCGCCAAACGATGGTCTACCGAAACGCATATGTGCCGATTGTTTGACTGTATTAAACGCGTCGTACGCATTTCGAAAACTATGCTATCGTTCCGATGAGGAGTTTCGGCAACTGATCAAAAACTCTTCACCGGAATCCGAATTCGAGTTTATCCCTGCTGAGCTAGATCAGAAGATTGAATTTGAGGATCATAAATCTGAACCAATTCAAGAATGTCGCTCAGAAATATCCATCAAGGATGAAGTTATTGAATTGGAGGATTTCTGCGATACTACTGTTAATGCTTCAGCGATAGAAGATGTTGTGGTCCCGAATGAAACAACGATTGGGGATACACTGGATGCCCCTTCCGTCCATCTGAATGATACCGATAATCAGCCCATGGAAACTTCCCCAAATCCTGTTTATAAGTATATATGCAAAGAATGTGATTACACTTCGCTTGTGCATTACAACTTCCGAAGGCATCAGAAAATTCAGAAGCACTCTGCTTTCGATGAGACTCACTGCCATCTCAATTTCAAACGTCATCAGAAAGTGTGGAAACATTCCAATGTTACTACTCTCGATTCTGTTATATCTGAAGCCAGCCCTAAAAAGTTTGACTGTCCGCATTGTGGACAGACTCGTGCCTCGTACTACAGTTTGAAGAGCCATATGAAGAAAACATGTGTGCCACTGAAGGAAAGCAAACAGTTTGAAGACGAACCCGAGGCTCAAAGTGATAGTTCGGAAAGGGATGAGCAAGTAGAACAAGCGGCAACTGAAGAAAGCTATAAGAAACGTTCAGTTTCCTTCCCTGAAGCCATTTCAACCAAAAGCGAAGTTCAACCGTTCATGTTCAAATGTGAATTCTGTAACTATTCCTCAGCCAAAAACGGAAACCTAATAAAGCATCATGCAGCGATGTGCAGAGACTCGACGTACCTCGATGAAACTCAAACCCCTGATAAATTCTTTGGTGACAACATCAAGAAGATAATAAGCGATTCGAGTGTGATAGAGGAATTATTGAATAAAACGGGACAGcctttatttccaaaaaaatacatttttgcaaATCATGATACAACCAGTACGTGTATGCCTCCGGTAAAATTAATTAACTTTGTTACGGAATACGAAAACTGTCTGCTGGTAACGATGCGCGGCGTTCGGTGTTGCGGATGCAGCATATTTTTCGAGAACAGCCTCACCCTTGCTGAGCATTGCAAGCAGGCTCATCCACGATGGAACACGTGGCTTCTGAAAGATGGTCTAAGTTGCGATGATTGCAAAATCATTTTTTACCGACACGACAGCCAGGATTATCATAATATGGTCAAGAAATCGGATAGGCTATTCGTTTGTACTCTTTGTGAAAAGGTGATTGTCAGCTACACAGCCTGGTTTAGCCACTACAGTAAACATGCTGTTGAGAACGCCATGCGGTGGAAACAACCGGAAAAAAACAGGTATTCCTGCAAAACGTGTGGTAGTCTCTTATTGACTGAAAGTTCCCTTAAAATGCACCGGTATAACGGGTGTCAGGAAATTCAGAGTAAACCAATTGGCGACAACAAAAAACGATGGCTGTTACCATTCCAGTGCGATTTTTGCAATTATTCGTGCATCAGAAAATTCAGCCTTCAACAGCATCATTTGCTTAGATCTTACGTGCACATCCCGGACGTGAAGCGGAAAATGTTCGAGCGGAAAGCGATGAAGTTGAGCATCCTGGGATACTCCGACAACCATAAGGCGTATCGCTTCGTGTACTGTGATACGGATCGGATCACGATGGGTTCCGAGCAGGATGAGATATATGTGAACGAAAATACGATACCAAATGTGATGCTCGAAGGTAACCCAAAAAGGATTATCACGGAACTAACAGAAATAATGAAACTCAGATTCAAGTCAGGAGAGCCTCTATTTCCAACCGACTACGAAGAAAAGCTCTACGGACAGAGCGCTACATATCAACCCCCCGCAAAGTTGATCGATTCCGTTGTGGTATATGAAACTTGCCTCGTGCTCACCATGCGTGGGAGACGCTGCTGTGGGTGCAGCAAGTTTTTCAATGACGACACGGCCCTCTCTGAGCACCGGGTAACGGAGCATAAAAAGCACCAAAGCTATGATGCACCGTTGGCGACTTGCGCAAACTGTAATCAATGGCTTATCCAAAAAGATAGCATTGAACACCATAAGCAACTTGAGCTATCCCGTCAATTGTTATTCTGCACTTCTTGCGAAACGATGATTGTAAGTAACAGTGCCTGGTTTACCCACTGCAAGGTGTGGCATAGCCGAAATGTTCCCAACGAATTCTATGAAACAGTGGTAGCAGGAGAACAACTCCGATGCTGTGGATGCCATCAGTTGTGCGCTAACCTAACGACTTTGGAGGAACATCAGGTTAAGGCTCATCGAAAGAGAAAGCGTTCGCACGGTCCATCGCAGCTCGAGTGCGGGAAATGTTTTAAAACATTCACATCATCAGTTCAATTGCAAAGACATCAAGAAATAAACACGGCTAGAATATTCTACCGATGTTTGAGAACCGAATGCCAAATGGAGTTCACAAATGAAAAGGAAGTGATTGTGCATATTGATGCTTGTGAGAAAACGAACATTACAACTCAAAACAATGGTGAATCCAAAACGTCATATTGTTGCTTCGAATATTGTAACAAATCTTTCGATAACAGCGATAAGCTAAACGTTCATATTGACATCGTACACAATTTCCAAAGAAGAGAAAATCGTTCAGAAAACACCGGAGACTATGTTTGTTGGAAATGCTTCAAGGGTTTTCCATCAGATGTCTCGTTACGTCGTCATCAGTTTCCGTGCCGGGAGAAAAGTGAACGTGAAACCATCAACGATGAGAATGTTGACGAGTCTTTCCCCAACCAGACAGGACAAGAAAAATTACCCCAATTAGAACATGCTGGACGTCCTTTCGCAACCAAAAACGATGAATTAGAACCAAAAATGGCGAGAGACAAGCCTATTCGTTGTTTTCCGTGCCGGATTTGTCgcgaaccatttgaaattttagCAGCGCGACGTATTCATGAGAGGAGGGTTCACAGGGGCGTGAAACCGTTCAAGTGTAATTATTGTGAAGCAAGTTTTGTTTTTCGCTCAACATTAAAGAATCACGAAAAAGAGCACACCACCAACATGTAA
Protein Sequence: MEEFCRICSRADDFRSFVLTTVSQATDVKIDDMLIYCTQLEISPNDGLPKRICADCLTVLNASYAFRKLCYRSDEEFRQLIKNSSPESEFEFIPAELDQKIEFEDHKSEPIQECRSEISIKDEVIELEDFCDTTVNASAIEDVVVPNETTIGDTLDAPSVHLNDTDNQPMETSPNPVYKYICKECDYTSLVHYNFRRHQKIQKHSAFDETHCHLNFKRHQKVWKHSNVTTLDSVISEASPKKFDCPHCGQTRASYYSLKSHMKKTCVPLKESKQFEDEPEAQSDSSERDEQVEQAATEESYKKRSVSFPEAISTKSEVQPFMFKCEFCNYSSAKNGNLIKHHAAMCRDSTYLDETQTPDKFFGDNIKKIISDSSVIEELLNKTGQPLFPKKYIFANHDTTSTCMPPVKLINFVTEYENCLLVTMRGVRCCGCSIFFENSLTLAEHCKQAHPRWNTWLLKDGLSCDDCKIIFYRHDSQDYHNMVKKSDRLFVCTLCEKVIVSYTAWFSHYSKHAVENAMRWKQPEKNRYSCKTCGSLLLTESSLKMHRYNGCQEIQSKPIGDNKKRWLLPFQCDFCNYSCIRKFSLQQHHLLRSYVHIPDVKRKMFERKAMKLSILGYSDNHKAYRFVYCDTDRITMGSEQDEIYVNENTIPNVMLEGNPKRIITELTEIMKLRFKSGEPLFPTDYEEKLYGQSATYQPPAKLIDSVVVYETCLVLTMRGRRCCGCSKFFNDDTALSEHRVTEHKKHQSYDAPLATCANCNQWLIQKDSIEHHKQLELSRQLLFCTSCETMIVSNSAWFTHCKVWHSRNVPNEFYETVVAGEQLRCCGCHQLCANLTTLEEHQVKAHRKRKRSHGPSQLECGKCFKTFTSSVQLQRHQEINTARIFYRCLRTECQMEFTNEKEVIVHIDACEKTNITTQNNGESKTSYCCFEYCNKSFDNSDKLNVHIDIVHNFQRRENRSENTGDYVCWKCFKGFPSDVSLRRHQFPCREKSERETINDENVDESFPNQTGQEKLPQLEHAGRPFATKNDELEPKMARDKPIRCFPCRICREPFEILAARRIHERRVHRGVKPFKCNYCEASFVFRSTLKNHEKEHTTNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -