Basic Information

Insect: Toxorhynchites rutilus
Gene Symbol: -
Assembly: GCA_029784135.1
Location: CM056647.1:28276812-28278552[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.1 4.6e+02 3.2 1.5 1 23 214 239 214 239 0.80

2 8 0.00026 0.029 16.4 2.9 1 23 243 266 243 266 0.96

3 8 8.3e-06 0.00094 21.1 0.5 2 23 276 297 275 297 0.97

4 8 5.1e-05 0.0058 18.6 1.2 2 23 302 324 301 324 0.96

5 8 0.00074 0.084 15.0 1.5 1 23 330 353 330 353 0.98

6 8 0.00078 0.089 14.9 2.4 1 23 358 380 358 380 0.98

7 8 0.002 0.23 13.6 1.4 1 23 437 459 437 459 0.94

8 8 3.1e-06 0.00035 22.5 0.6 1 23 465 489 465 489 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.1	4.6e+02	3.2	1.5	1	23	214	239	214	239	0.80
2	8	0.00026	0.029	16.4	2.9	1	23	243	266	243	266	0.96
3	8	8.3e-06	0.00094	21.1	0.5	2	23	276	297	275	297	0.97
4	8	5.1e-05	0.0058	18.6	1.2	2	23	302	324	301	324	0.96
5	8	0.00074	0.084	15.0	1.5	1	23	330	353	330	353	0.98
6	8	0.00078	0.089	14.9	2.4	1	23	358	380	358	380	0.98
7	8	0.002	0.23	13.6	1.4	1	23	437	459	437	459	0.94
8	8	3.1e-06	0.00035	22.5	0.6	1	23	465	489	465	489	0.94

Sequence Information

Coding Sequence: ATGGATTACATGTTGGATTTTCACAAAGTCTGTAGAATGTGCTGCGAGGAAAAACTTCGAATGCTATTGATTTTCGAACAGGATTCGAAAAATCCTCTGGATAAACTAATTAGCGATGTGTTGCGATTGGAGGTGGTCTGTGATGATGGTTTGCCTCAGCAAATCTGCAGAGATTGCATTGCCACTCTCACGAAGCTCCAGGAAACCATTGAAAACTTTCGTGCCAATGATTATAATCTGCGCAGGCAGCTTGGTCCAATCAACTTTGTTGAAGTCAAGGAAGAAACCATGGAAGTGGAGCGACAGGAACTCGAAGACGAAGATGACGATGAGAATTTCACCCCAGAAATGAGCGAAGAAGGCGATGAACATCAACGAGAGGATTTGGAAGATTATGACATGGATGAAGAATGGATAGAAGAGAAGCCTACAGGGAGGATAACAATAAAAGCGACTAAAGGAAATTCGGAAGAGTCGACGACGAGCGGAAAAGCTAAACGTGGTCGCCGAAAAACGGTGTTCGAGGATCCTAACCGTCCGCGTTTAAATGATTTCAAATGTTACATTTGTAAAAGCGATTCCATGGGATCAGCAGAGGCTCTTATTGCTCATTTGAATTCCCATACTGATGAGCTACCTTATACCTGTCAAATATGCGTTCTGGAGACCGCTGTGATAACCACTGTGTCTAGTTTGAATGTACACAAGCGTATGCATGAGAACCCCCACAAATGTCCCTACTGCGATAGGCGTTACAGCAATAAGCGAAACATCTCGTTGCATGTACAGATGTATCATATGGCCGAGAACGCTCCCTGTCCTTCTACGTGCTCGTATTGTGACAAGGTTTTTCCAACGAAACAGTCGTTGGCGAATCACGAGAAGATACACACGAAAGCGGTAAGTTGCGAATACTGCGGCAAGATTTTTGTCGGGAAACACAAGCTCCAGTTGCACATTCAGCGGAAGCATGAACGGGTCCGGAAGTACGAGTGTCATCTATGTCACAAGAAGCTCAATTCATTGGATGCTGTGCAAGTGCATATACGCATAATGCACTCCGACAAAGAGTACAACTGCAAGTATTGCCCAAGAACATACACTTCGGAATTGTCCCTTCGTTATCACGAGAAAAAACATGAAGAAAATCCCAGCTACAAGTCGACGAACAACTGGAAGCAATACTACACCTTCGTGGAGGGCGCAGAAGGAATCAAGGATGGGGTTCGCTTGAAGAAATGTGGTCTCTGTGGCACCCTTACGAAAGCAATCGGGCCGCATTTGAGTGCGGTGCATTTCCCGAAGGAATTTCGCTGTGGGCAGTGTGATATGACCTTCAAACGCAAGAACACATACGACGCGCATGTGTTTGAGCACGAGTACGGTAAGGCTTACAGCTGCCCAATCTGTGGCAGGGGATTCTCCGAGAAGAAAAATTTGCTCATTCACCTCAAAACTAAAAAGCATCGTGATCATCCGATGGCACAATCACTTGAGTGGTTGAATGAGAAAAGCGCAATGACCGATGTAAAGTCGGAAAGAGGTGTCGTCATCTCTGAGGACGTAATTGGAGAAGAAGTGCTGAGCGAATCAGCGCTGGAGACCGATGATTTTAGTACATAA
Protein Sequence: MDYMLDFHKVCRMCCEEKLRMLLIFEQDSKNPLDKLISDVLRLEVVCDDGLPQQICRDCIATLTKLQETIENFRANDYNLRRQLGPINFVEVKEETMEVERQELEDEDDDENFTPEMSEEGDEHQREDLEDYDMDEEWIEEKPTGRITIKATKGNSEESTTSGKAKRGRRKTVFEDPNRPRLNDFKCYICKSDSMGSAEALIAHLNSHTDELPYTCQICVLETAVITTVSSLNVHKRMHENPHKCPYCDRRYSNKRNISLHVQMYHMAENAPCPSTCSYCDKVFPTKQSLANHEKIHTKAVSCEYCGKIFVGKHKLQLHIQRKHERVRKYECHLCHKKLNSLDAVQVHIRIMHSDKEYNCKYCPRTYTSELSLRYHEKKHEENPSYKSTNNWKQYYTFVEGAEGIKDGVRLKKCGLCGTLTKAIGPHLSAVHFPKEFRCGQCDMTFKRKNTYDAHVFEHEYGKAYSCPICGRGFSEKKNLLIHLKTKKHRDHPMAQSLEWLNEKSAMTDVKSERGVVISEDVIGEEVLSESALETDDFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -