Basic Information

Insect: Toxorhynchites rutilus
Gene Symbol: -
Assembly: GCA_029784135.1
Location: CM056649.1:103259601-103261558[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.58 66 5.9 0.1 2 23 229 250 228 250 0.97

2 11 0.0037 0.42 12.8 0.7 1 23 287 310 287 310 0.97

3 11 0.072 8.2 8.7 4.2 1 23 317 339 317 339 0.97

4 11 0.0036 0.41 12.8 1.4 1 23 347 369 347 369 0.98

5 11 9.3e-05 0.011 17.8 3.7 1 23 375 397 375 397 0.98

6 11 0.001 0.12 14.5 1.8 1 23 408 430 408 430 0.97

7 11 3.1 3.6e+02 3.6 0.1 3 23 458 480 457 480 0.90

8 11 0.00011 0.012 17.6 0.2 1 23 484 507 484 507 0.97

9 11 0.00076 0.087 14.9 3.3 1 23 513 535 513 535 0.97

10 11 1.2e-06 0.00014 23.7 2.7 2 23 542 563 542 563 0.98

11 11 0.023 2.6 10.3 2.8 1 23 569 591 569 591 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.58	66	5.9	0.1	2	23	229	250	228	250	0.97
2	11	0.0037	0.42	12.8	0.7	1	23	287	310	287	310	0.97
3	11	0.072	8.2	8.7	4.2	1	23	317	339	317	339	0.97
4	11	0.0036	0.41	12.8	1.4	1	23	347	369	347	369	0.98
5	11	9.3e-05	0.011	17.8	3.7	1	23	375	397	375	397	0.98
6	11	0.001	0.12	14.5	1.8	1	23	408	430	408	430	0.97
7	11	3.1	3.6e+02	3.6	0.1	3	23	458	480	457	480	0.90
8	11	0.00011	0.012	17.6	0.2	1	23	484	507	484	507	0.97
9	11	0.00076	0.087	14.9	3.3	1	23	513	535	513	535	0.97
10	11	1.2e-06	0.00014	23.7	2.7	2	23	542	563	542	563	0.98
11	11	0.023	2.6	10.3	2.8	1	23	569	591	569	591	0.98

Sequence Information

Coding Sequence: ATGCCACGCCGGTGCCGTCTATGTTTGCGAAATGCTACAGAACCGTGTCCACTGTTCAAATCACGCATTGGCGATAAATTGGTGACTGAAATCATCTGGGTTACGTTTAAACTGGAGCTCGACAAAAGTGTGGATTTTCCCAAGTATGTTTGTAAAAATTGTCTCAGAAAAGTGGATTACTTGTACCATTTCCATCAAGAGATCGAAGGGAGCCAATTATTGTTACACCAGTTGAGAGAGGAAGGTAAATTGGAAGGTATTGTCGCTGAGCAAACCTTTGAAGAAGAAAAAGTAGAGTATCACAGTGATGGAATATTGGAGGAAGTCGAAGAACTGGAGGAATCTATAATTCTCTCGGGAAAGAATGATCCGGTCCAAGATGATGTTACAGAGCAGGAGAATGATGAACTTGAATCCATCGGCTGTGAGGCTAAAGAAATAGTTGCAGAGCAGCTAATCGACATAAAAATTGAAACCCTCGAATCTGACAATGAATTTATTGTCGAGCATTTATCAGAGGAATTAAACGAAGAGCCGAAAAGTGAGAGTGACAATGATTTCAGAGGATTTGAGGAACTAGTTCCAATGAAACTCGAAGCTGCCAAAGGCTTGCGACAAAAACAAACGAAAAGGAAATCGAAACAAACGGTGCCCAAACTTGATATTGTCGAGACTATACCGAACAAGTGTTATATTTGTGATAATGTTAGCGAAACAAGGGATCTTTTCGACATGCATCTTATTGTCCACAAAAATATGCTACCCTACCAATGCGAAGAATGTAGCACGGAACAATATCCGATAGAGATCAAGACTTTGGTTTTGCTCAATAAACATTTTGAGTCTCACGATTTCAATTATGTTTGCGACCATTGTCCGCTACGATTCCGATCGTATCCACCCCTCTATGATCACACACGTAACGCACATTCGGAGACTCGCGATGGTTTTCATTGCGAGATGTGTGGCCAAATGTTTCACGAAATTCGCAAATTTCAGAAACATGTTCGAGCCCACAGGAATAGAGAAACGCAGCGATATAAATGCGAAACTTGTCAAAAGTCCTTCCAAACAGGAACAATCTTACGTCGTCATGAACGTATTCACAGGAAAGATTCCATATTCAGATGTCCTTTCTGCGACCGCGGTTTCAATCACGAGTCGAATTTCCAGCTGCACAAAATGCGTCACATCCAGCAGCAAAGCAATACTCACAATGGCCATCCTTGTTCCGTGTGCGAAACACATTTCACCAACGCTATCGATTGGCGGAATCATATGCAGCAGCACTTTCCGGATGATCCCATGTATACCACAAAGACGGATATTCTTCCGGCGTCATTAAAGGATATCAACAGTTATCCTCGTGCCTGTGAGGAGCCTGACTGTAAATATATGGCCCCTTCGTACCAGCTCATGTGGTCCCACTACCGGAAGCATTACAAAATGTTTCAGTGTCAGGAATGTGGTCGGAAGTTTGCAACAGCAACCATTCTCAGAACCCACATTCAGGTGATCCACAAAAAGATACGCAAGTTCCAGTGTGAATTCTGTCCTAAGACATTTGCCTACCAACATAAGTACAAGGAGCACACGGATGTGCACAAGGGCATTAAAGCTCGCAAGTGTCGCTATTGTGATAAAACCTTCACCCATTCGTCGAATCTGATTGTACACGAGCGTATCCATACGAGGTCAAGGCCATATACTTGTAAGACGTGCGGATCAACCCATGTAACCACCTCGGCTCTGAAGAAGCACGCAAAAACGCATGAGAAGAACAAGACGGGGGAAATGTTGGAACTTTACGTGATGGACGCGCATGACGGAGTGACGGAGAATGTGATAGCCGAAGAGGAGGAAGTGATACAAGAGGACTATGGCCCGGCTGAGATGACGTAG
Protein Sequence: MPRRCRLCLRNATEPCPLFKSRIGDKLVTEIIWVTFKLELDKSVDFPKYVCKNCLRKVDYLYHFHQEIEGSQLLLHQLREEGKLEGIVAEQTFEEEKVEYHSDGILEEVEELEESIILSGKNDPVQDDVTEQENDELESIGCEAKEIVAEQLIDIKIETLESDNEFIVEHLSEELNEEPKSESDNDFRGFEELVPMKLEAAKGLRQKQTKRKSKQTVPKLDIVETIPNKCYICDNVSETRDLFDMHLIVHKNMLPYQCEECSTEQYPIEIKTLVLLNKHFESHDFNYVCDHCPLRFRSYPPLYDHTRNAHSETRDGFHCEMCGQMFHEIRKFQKHVRAHRNRETQRYKCETCQKSFQTGTILRRHERIHRKDSIFRCPFCDRGFNHESNFQLHKMRHIQQQSNTHNGHPCSVCETHFTNAIDWRNHMQQHFPDDPMYTTKTDILPASLKDINSYPRACEEPDCKYMAPSYQLMWSHYRKHYKMFQCQECGRKFATATILRTHIQVIHKKIRKFQCEFCPKTFAYQHKYKEHTDVHKGIKARKCRYCDKTFTHSSNLIVHERIHTRSRPYTCKTCGSTHVTTSALKKHAKTHEKNKTGEMLELYVMDAHDGVTENVIAEEEEVIQEDYGPAEMT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -