Basic Information

Insect: Toxorhynchites rutilus
Gene Symbol: RREB1
Assembly: GCA_029784135.1
Location: CM056647.1:177307345-177317875[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.6e-05 0.0063 18.5 0.8 1 23 167 189 167 189 0.99

2 15 0.00022 0.025 16.7 0.1 1 23 204 226 204 226 0.97

3 15 9.3e-06 0.0011 21.0 5.2 1 23 232 254 232 254 0.98

4 15 7.8 8.9e+02 2.3 0.6 1 23 337 361 337 361 0.85

5 15 0.09 10 8.4 1.8 2 20 367 385 367 387 0.94

6 15 1.9 2.2e+02 4.2 1.3 1 21 432 452 432 453 0.92

7 15 0.061 7 8.9 0.1 1 23 604 626 604 626 0.97

8 15 2.2e-05 0.0025 19.8 0.5 1 23 635 657 635 657 0.99

9 15 0.003 0.34 13.1 2.3 1 23 663 686 663 686 0.97

10 15 0.0017 0.2 13.8 2.1 1 23 1082 1105 1082 1105 0.95

11 15 0.00016 0.018 17.1 0.3 2 23 1442 1463 1441 1463 0.97

12 15 0.8 92 5.4 5.4 1 23 1469 1492 1469 1492 0.96

13 15 4.2 4.8e+02 3.2 6.2 1 23 1612 1635 1612 1635 0.93

14 15 0.022 2.5 10.3 0.6 3 23 1684 1704 1682 1704 0.95

15 15 0.00084 0.096 14.8 5.3 1 23 1710 1732 1710 1732 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.6e-05	0.0063	18.5	0.8	1	23	167	189	167	189	0.99
2	15	0.00022	0.025	16.7	0.1	1	23	204	226	204	226	0.97
3	15	9.3e-06	0.0011	21.0	5.2	1	23	232	254	232	254	0.98
4	15	7.8	8.9e+02	2.3	0.6	1	23	337	361	337	361	0.85
5	15	0.09	10	8.4	1.8	2	20	367	385	367	387	0.94
6	15	1.9	2.2e+02	4.2	1.3	1	21	432	452	432	453	0.92
7	15	0.061	7	8.9	0.1	1	23	604	626	604	626	0.97
8	15	2.2e-05	0.0025	19.8	0.5	1	23	635	657	635	657	0.99
9	15	0.003	0.34	13.1	2.3	1	23	663	686	663	686	0.97
10	15	0.0017	0.2	13.8	2.1	1	23	1082	1105	1082	1105	0.95
11	15	0.00016	0.018	17.1	0.3	2	23	1442	1463	1441	1463	0.97
12	15	0.8	92	5.4	5.4	1	23	1469	1492	1469	1492	0.96
13	15	4.2	4.8e+02	3.2	6.2	1	23	1612	1635	1612	1635	0.93
14	15	0.022	2.5	10.3	0.6	3	23	1684	1704	1682	1704	0.95
15	15	0.00084	0.096	14.8	5.3	1	23	1710	1732	1710	1732	0.99

Sequence Information

Coding Sequence: ATGGATCGCCGCCTCTCCACCGATTCGTCGTCCCAGGAAGCGATGGATATCAGCTCGTCCAATCGTACCGCCAGCAGCGTGGAGACGAACAATAACCGTTCCACACTGAGCAATCATCAGCTCAACAAGACTACCACCACCAGCGCCGATTCGGACAACATCGATTCGGAtgaggagcagcagcagcagcaccagcgCAGATCGTCGTCGGTGCTGTTCCAGTCGCGCCAACACACCGTCCGCAGCGAAAACCTTCACCAGCTGATGGACAATATGCTTCGGCGGAAGTTCCACAGTCTCAACCACATCGCTgcccacaacaacaacaattacAGCGGGAAGCGTTCGCGCTCGCCAATCGCTACTAGCAACATTCTGCAGCAGCATTTGGCGGCAGCACCCAGCGAAAACCATAACCAtcatcaccaccaccaccaccagcagcaacaacagcatcCCACAAATCACCACGCCACCGAAGGGTCGGAGGGAAAGCGATATGTGTGCCCGATCTGCGACACGATTTCCTCCACAAAGCACGACTTCACGGAGCACATCCGGTCGCACAACAACAGCAAACCGGCGTCCGGGGACAACGGGGAGAGCCAATTTGTGTGCAAAATCTGCTCCAAGGTGCTGTCGTCCGCTTCGTCCCTGGATCGGCACGTGCTGGTGCACACCGGCGAGCGTCCGTTCAACTGCAAGTACTGCAATCTGACGTTCACCACCAATGGAAACATGCACCGGCACATGCGAACCCACAAACAATCGGAACGGGAGAGTTACGAGAGCGATGGGTCGACCGATAGTGGGGGGAGCAGCAGCGGCGGCGGGGCCAGCAGTGGCGGCATGtccaacaacaataacaattgCTACAGCAGCAACTACGATGGCGAGGGGAAACGGAAGAACGCGGACGAGAATGTGCACTACAAGCGCAAGATCCGGAcgacgatcaacaacaacaacatcctgGATGGTGTGAGTGTGACCGAGGGGGTGCAGAAGTTCTGCTGCCCGGTTTGCGTCCGGAACGACTTCTCCAGCATGGTCAGCCTGGAGAGCCACATGGATCGGGAGCATCCGCAGATTCCCGCCCGCTGCAGACACTGCGAGGTGGTGTTCAAGAGCTACAAGGCGTTGAATGCGCATCGATGCGGGAACAACAACTACCAGAATATCACCCCCGGCTTCAAGGATCTCACCTTCGTGGACTTTTCCAGCGAGAAGTTCCCGCTGATAGCGAAAAGTGTGTGCGAGCAGAGCATCCGGACGCCGGTGACGAGCCAAAAGTTCGAATGCAGCAAGTGCTACCGGGCGTTCCCCTGCTCGAAAACCCTGGAGATGCACGTGAAGGATTGTGGCGTTTCGGAGTACACTTCCAGTGGGGGTGGCAGCGGCGAGAAGCGCAAATGGACGATTAGTGAGGGATCCTCCGAGGAGGAGCTCAAACGGGATGACTTCTTCGCCAATTTGGACCTCCAGAACAAATCCATGTCGACGAATATGTCGTCGAATATATCGGAGGCACCGACGACTCCGTCGTCGCTGGACAAATCCTTCACCTCGCCGATAAACACCCGGGATATCAAGCAGGAACCAAGCTACTATCACCACAGTGGGGCTAACTATCCGCCCCAGCCGGATACCAAAGATCTCGCCGACATTCAGTCGATCATCAACGTTACCTCGTCGGGTGGTTTCTTCCGCCAGCTCGACAAGGACCTCTTCTCGCCGCAGAAAGACGGAGAAGAGGAAGCCCAGGACGCCTTTACGGCGGAGTTCCGCAAGATGAAGCTACGCGGCGAATTTCCGTGCCGTTTGTGCACCGCCGTATTCCCTAACCTTCGTGCCCTGAAGGGTCACAACCGTATCCACGTTTCCGCGGCTGGGCCGGGTCCGTACCGCTGCAACATGTGTCCCTACATGATCAACGACAAGGCGACCCTCATTCGGCACATGCGCACCCACAATGGCGATCGACCCTACGAATGCGCTCTCTGTAACTATGCTTTCACCACGAAGGCCAACTGTGAGCGTCATCTGCGGAATCGCCACGGGCGGACAACCCGTGATGAGGTCAAACGATCGATCATTTACCACCCCTCGGAGGATTCCTCCTGCGAGGATCCCCTGAAGAAGCTGCAGATGTTCAACACCCCTCCCGGGGATTTCGATCGGGATGTGGACGATAAACCGACGGATCGCAGCACTCCTGTTTCCCACCTGAAGGAGATGCTGATGCCCCTTCCGATGAGTCTGGTAACGAAAATCGATAACACCCCACTGCCCATGACCCCGGCCAAGATTCAGGTCAAGAGTTTGGAGAAACTGAATCAACTGACGCCGCCCCAGGAGCAGGACTACGAGAAGGAAACTCCGGAGACACCAGTCTCCCAGCCGGATACTTCCCGCCCGATGGATCTCAGCATGGACGCGTTGGACCTGAGCAAGAAGCCGGAACCGACGACGATCACAACACGGTCGGCACCGCTGGAGAACGACATCGACTCGGACCATCCCCGCTCGGATGCCGaagatgatgacgatgaggacgaagAGCGCGGCGATGATGAGGCCGAagatgaggacgaggatgaAAGCAGCCACCATGTGGCTAAAATGCCAAAGCTGGACCTCTCACTGCTGGAGAAAAACCAACAGCAGCTTCAGTTGATGCAGCAGAAATTCCTCAGCGATACGCTGTCCAAACTGGATCCCGCTCACTACTTCCAGCTGAGCCAGCTGTACAGCCGCTTCAGCTTCCCTCCCACCGCTTTCCCGCTGCATCCTTTGTTTCTGCAGAATCCACTACTCTGCGCAGCGCCCGGAGCGCTCGCGGATCTGAAGAACTTCTTCCCCAAAGAATTCCCGATGCTGCCACAAATGTCCGGCGGAAGCTTGATCGGCAATCCGTTCCACTCGCCCGCAGAATCGGACAAGAGTGGAGCTACCACCGAGCAGAAGCAGCACCACCAGGTGTCACCATCATCAGCTCAACTGACGCCGGTGAAACATCCGCATCCCTCGCCACAGCAGCAGCACAGTTTGCCAAAcgtccagcagcagcagcatttaCAGCATCCGAAGCAGCATTCTCAGCAGCAGGTTGCGCCACCACCGCCCCCACCTCCCTCGACAATGCCAACCATCCCGCTGGGAAACGGGCCCGTCAAGATGGTCATCAAGAATGGGGTGCTGATGCCAAAGCAGAAGCAGCGCCGCTATCGCACCGAGCGTCCCTTCGCCTGCGAACACTGCTCGGCCCGATTCACCCTCCGCTCGAACATGGAGCGTCACATCAAGCAGCAGCATCCCCAATTTTGGTCGCAGCGTCAGCGCGGAGGACACCATCTGATGCGTGGGCGGGGTCACTCGGCAGTGGCGACGGCGGCCGCAACCAATTCCGCACTGCAGCCCTCCCCTCATCATCTTGCGCATCCGCTTCCGCACGCGCATCCACATGCCCACCACCATTCGGCGGCACTGGCGGGGGGATACGGAGGCATTTCCGAGCAGGTGAAGTACGCCATCTTGGCTCAGCAGTCGGGCAAAGCGGcccatcatcaccatcatcagcaGGCGGGACGCGGGGGAGAAAGCGGCGCCGGTGGCACTATGAGCAGTATGCTGCAGAATATCATTGCTCAAGGACAGCATCCGTTTGGTCATCAGATGCACTCgccccagcagcagcagcagcagcagcagcgcagAGGAGGAGCGGGAGCATTGTCGAGCCattgcaacaacaacaacaacaacaacaatggaCACGGAGCGGATGATGAGGAAGAGGAGGACGAGAAAGAGCTGGTGATCGATGAGGAATTTCAGCCGGAGGATTTGAGCAAGGGAGACGAATCGGACAGCGAAGAGTTGCATCAGCATCAACTAGGGCGCGAAAGTCCCGTGTTCCAGCACAAGATTTTGAAGCAAAAACTGGAGGAAAGCAAAGAGCACCAGCGACAGCAGGCGGCGAAAGCCGTTGCCGAGGGAATTCTGGAGCAAGCGATTCGCCAAAGGAAGGAGGTGGACAAAGAGAAAGACACGTCCGCCGCGAAGGCGCCCGTCGATAGTGGCAGCAAGGACGAGGGCGATTTGGCGTCCGTTTCCAAGCTGGTGGACAACGCCACGAACGTGGCGTACGAGAACTATTTTAGCAGACCTGATGTTCCGCTGTCACAGGATCAAAGCGACGAGGAGGGGCTGGTGGCTTCCGGGTCGGCATCCGAAAGCAACAACTCCGGCACCGACGATCCAAATCCATCGTCCATTCAGCAGAAGAAAAAATCCGCCTACAGCCTGGCGCCAAACCGAGTCAGCTGTCCCTACTGCCAACGCATGTTCCCCTGGTCCAGCTCCCTGCGCCGCCACATTCTAACCCACACCGGCCAGAAGCCGTTCAAGTGTTCGCAGTGTACACTGCTCTTCACCACCAAATCGAACTGCGATCGCCACTTGCTGCGCAAACACGGCGACGTCGAGTCGGCCATGTCCATTCCGGTGCCGATCGACGACCTGCTGGACCCGAAACCGGAACCCGTCCCGGTTGCCGTCGCCGAAGCTATTGCAAAATCGAAAGCCACACCACCACCCTCGCGGCCAGTAAGTCCCAAGCCGTTGGCGCCCCTCAGCAAACAATCTGCTCAATCGCAGCTCGAAGAGGAATCGACAGTTCCGCCAGTCTGCGTTGAACCGGAAGCCGTTTGCTCACCGGACCCACCCACAATCAAAGAAGAACCAGAAAGCAGCGTCCATCCAGCGATGGCAGCAGCAGCTGACGCCGACGATAACAACTCTTCGATACCGCCGATCAACTCGGATCTTCCCTTCAAGTGTCATCTGTGCGATTGCTCGTTCGGCGATCGCGTGTCCTGCCTGGACCACATCAAACAGTCCCACGTGCAGGAGTTTGTCCTGCTCATGAACAAAGTGACGCTGGAGGCGGAAAGCGAAGCACCGTCCGGTTCGCCGGATGACGACGAAAGTGGCGAAGGTTGTGGTCGCGGTGGAAAGTATCCCGACTATGCCAATCGGAAGGTAATTTGCGCCTTCTGTCTGCGTCGCTTCTGGTCGACGGAAGACCTGAGGCGCCACATGCGCACCCATTCCGGCGAGCGGCCCTTCCAGTGCGATGTGTGCCAGCGTCGGTTCACCCTCAAGCACAGCATGCTGCGCCACCAGAGAAAGCACAAATGCTCCCGCCTAAATGGGGGTGGGGGCGGCAGCGGCGCCAAAAATGGCAGCAACGATCCCGCGTCCGATGTGAGCGATGACGAGCAGGAGCCGTCACCGCCACCGGTTGTTGCCACAAGTCGCCCCAAGAACTCCACCATCCAGAGCCAGAGGCAGCAGCAGCTCATCGATTCGGGCCTGATCGGAAATCTGCTCGGCATCAGCGATCAAGGAATCCTGAACCGGATGCTTCTGGGGTCTGCCTCCGACGCGGCCAAACTACTCGGCGTGGAAAAATAA
Protein Sequence: MDRRLSTDSSSQEAMDISSSNRTASSVETNNNRSTLSNHQLNKTTTTSADSDNIDSDEEQQQQHQRRSSSVLFQSRQHTVRSENLHQLMDNMLRRKFHSLNHIAAHNNNNYSGKRSRSPIATSNILQQHLAAAPSENHNHHHHHHHQQQQQHPTNHHATEGSEGKRYVCPICDTISSTKHDFTEHIRSHNNSKPASGDNGESQFVCKICSKVLSSASSLDRHVLVHTGERPFNCKYCNLTFTTNGNMHRHMRTHKQSERESYESDGSTDSGGSSSGGGASSGGMSNNNNNCYSSNYDGEGKRKNADENVHYKRKIRTTINNNNILDGVSVTEGVQKFCCPVCVRNDFSSMVSLESHMDREHPQIPARCRHCEVVFKSYKALNAHRCGNNNYQNITPGFKDLTFVDFSSEKFPLIAKSVCEQSIRTPVTSQKFECSKCYRAFPCSKTLEMHVKDCGVSEYTSSGGGSGEKRKWTISEGSSEEELKRDDFFANLDLQNKSMSTNMSSNISEAPTTPSSLDKSFTSPINTRDIKQEPSYYHHSGANYPPQPDTKDLADIQSIINVTSSGGFFRQLDKDLFSPQKDGEEEAQDAFTAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRIHVSAAGPGPYRCNMCPYMINDKATLIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHGRTTRDEVKRSIIYHPSEDSSCEDPLKKLQMFNTPPGDFDRDVDDKPTDRSTPVSHLKEMLMPLPMSLVTKIDNTPLPMTPAKIQVKSLEKLNQLTPPQEQDYEKETPETPVSQPDTSRPMDLSMDALDLSKKPEPTTITTRSAPLENDIDSDHPRSDAEDDDDEDEERGDDEAEDEDEDESSHHVAKMPKLDLSLLEKNQQQLQLMQQKFLSDTLSKLDPAHYFQLSQLYSRFSFPPTAFPLHPLFLQNPLLCAAPGALADLKNFFPKEFPMLPQMSGGSLIGNPFHSPAESDKSGATTEQKQHHQVSPSSAQLTPVKHPHPSPQQQHSLPNVQQQQHLQHPKQHSQQQVAPPPPPPPSTMPTIPLGNGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWSQRQRGGHHLMRGRGHSAVATAAATNSALQPSPHHLAHPLPHAHPHAHHHSAALAGGYGGISEQVKYAILAQQSGKAAHHHHHQQAGRGGESGAGGTMSSMLQNIIAQGQHPFGHQMHSPQQQQQQQQRRGGAGALSSHCNNNNNNNNGHGADDEEEEDEKELVIDEEFQPEDLSKGDESDSEELHQHQLGRESPVFQHKILKQKLEESKEHQRQQAAKAVAEGILEQAIRQRKEVDKEKDTSAAKAPVDSGSKDEGDLASVSKLVDNATNVAYENYFSRPDVPLSQDQSDEEGLVASGSASESNNSGTDDPNPSSIQQKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSQCTLLFTTKSNCDRHLLRKHGDVESAMSIPVPIDDLLDPKPEPVPVAVAEAIAKSKATPPPSRPVSPKPLAPLSKQSAQSQLEEESTVPPVCVEPEAVCSPDPPTIKEEPESSVHPAMAAAADADDNNSSIPPINSDLPFKCHLCDCSFGDRVSCLDHIKQSHVQEFVLLMNKVTLEAESEAPSGSPDDDESGEGCGRGGKYPDYANRKVICAFCLRRFWSTEDLRRHMRTHSGERPFQCDVCQRRFTLKHSMLRHQRKHKCSRLNGGGGGSGAKNGSNDPASDVSDDEQEPSPPPVVATSRPKNSTIQSQRQQQLIDSGLIGNLLGISDQGILNRMLLGSASDAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -