Trut000030.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- ZBTB26_1
- Assembly
- GCA_029784135.1
- Location
- CM056647.1:1162937-1165772[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.78 89 5.5 0.1 2 23 235 257 234 257 0.94 2 15 1.3 1.4e+02 4.8 3.5 1 23 292 315 292 315 0.97 3 15 0.35 40 6.6 7.6 1 23 329 351 329 351 0.97 4 15 0.12 14 8.0 0.5 2 23 426 447 425 447 0.97 5 15 5.5e-05 0.0062 18.5 2.7 1 23 479 501 479 501 0.98 6 15 2.8e-05 0.0032 19.5 0.2 1 23 507 530 507 530 0.97 7 15 0.00011 0.012 17.6 1.5 1 22 536 557 536 560 0.90 8 15 0.0015 0.17 14.0 0.1 1 22 566 587 566 587 0.94 9 15 0.18 20 7.5 0.6 2 23 628 649 627 649 0.87 10 15 0.043 4.9 9.4 6.8 2 23 656 677 655 677 0.97 11 15 3e-07 3.4e-05 25.6 0.8 1 23 684 706 684 706 0.98 12 15 6.2e-05 0.007 18.4 1.5 1 23 712 734 712 734 0.99 13 15 1.6e-05 0.0018 20.2 0.4 1 23 765 787 765 787 0.99 14 15 9.9e-06 0.0011 20.9 0.5 1 23 793 815 793 815 0.99 15 15 0.0047 0.53 12.4 0.2 1 21 821 841 821 842 0.94
Sequence Information
- Coding Sequence
- ATGCTTCTTCGACATGTTATTCCCACTAACAACGATGTGGAGGAAATCTACATAGTGAAACAGGAGGAAGAACAAACAGGACCGAACAGCAATCCTTTGGCTGCGGCTAGTTCCAGCAGACATGGAGGGTTGCTTCCGACCTCTTTGCTCGAGAACGAAGATGTTGAAATTAAAGACGAACCGTTGAGTATTCACGGGAGTGACGAAGAGGATGAAGTCTATGAAAGATATGATCCACCAACACCGTTGCTCCATCCGATTCCGGTAGAGATAAAGCTTGTGAAAGTGGAAGATATCCCTAAAAAGTTGGAACTCTTAGTGAAGAATGAGCAGGAACATCCGGTACAACAAGCTACGAAGGAAAATAAACCTGAGTTGCAGAAAACTCAAGATCATTTGAGGGATGTGAAAAGGGAAACAAGTGTCAGCTCGGATGGTGATTGGGCAAGAGATGATTGTGTCCCACTGGCCAAGAGGGTTCAGAAATCGACACGAGGGCGCAGACGAAAAGTGGATGTCAAAAAAGAGAAAAACGACACTGATTCGGAAGTGAGCTTGGATGGTCACACCGATGATTACGACTACAAACCCCCTCTAGATGGCATCAAAAAGGAAAAGAAGCAACGGAAAAGACAACGCAAGAAAGTTAAATCCGACGTGGAGAAAGACGGAAGCGAAGAATCCGAAGGTGAAGATGTTGTCAAATGCTTCATATGCGTGAGCGATCTGAAGGAACCCTGGGAGTTGATTAAGCATTTGAGAAGGGAGCATAAAGGCCTGCTTCCCTTCAAATGTGCTGTTTGTGTATCTAGGGAAATTCACAAATTGAAGGAGCTGAATTTACACTTCCGGCAACACGATGAAAACAGAAAACACAAATGCTTGTATTGTGCAGCACGATTCCATTCCGCCCAGGCGCAAAGCAGTCACATGCGGCGGATGCACAACGAAAAGTACAACATGGATATGGAAAAGTATCGTCGATTCGTATGTCGCTTCTGTGGTAAGAAATTTACCAAGAAACATGACCATGAGACTCACGAGAAACGTCACATAAGAGAAAACACGAACGACGCAGAATTCCTGAAAAGGGAACTAAAGTGCTATATTTGTAATGACTTTGTGGGAGGCTCGAGAGAAGATCTTAACACACATGTAACATTGCACAACAAAGAGTGGCTTCCATATCACTGCCAAAAGTGTGACAACAAAAAGATTACGACCGCTCGTGTCCTTTGCGAGCATCTTCGTCAGCATGAAGAGGGATTGGCGGTCAAATGTGTGTATTGTGAGGAGCGATTTGTTACTTTGGCTGCTTGTCAGGCCCATGAGCGGAGTCATGCTGCAGAAAAGGAAGCTGATGAACTCCTGGATGCAAAGATTATTGCGGAAACCCACAACGCTAATGTGGTTGTTGTTGATGGACAGAAGCGTTTCCAGTGTGACAAATGTGATCGATCGTACACTCTCTTCAGTAGTCTTAGAAAACATCAGAATCTACACACAAAAAGCAATGCTTTCGTTTGCTCGAAATGTGGTAGGGCTTTCATTAAAGCCTCTTCGTTAGCGCTCCACGAGAGACGAAATCACGACGAGAACGCAAACTTTTCCTGTGAAGGATGTGGCAAAACGTTCCGAACGATTGGTCATTTGCTGGACCATAGAACTCGAACACAACATTACGCTGGAAAGCCCTATATCTGCGAGGGTTGTACGACGACATTTCGCTTACCGGAAGAGCTTAAGGAGCATCAGGAGACATGCTCGGAAACAGAAGCGAATCGACCATGCTTTTGTGGCCTTTGTTCTAATAATTTCGATTCGTTGGCGCAAGCGTTGGAACATGTGAAAATTGATCACGATCCTGAGATCCCGGAAACTAAGTGCCGATACTGCGATTTGACTTTTCGCGATGCAGAGCGAATTGTGGAACATGAGTTCAAACACACGTTGCCGGGTATAATGACATGTACACTCTGTAACCGGATTTTCAAACATTTGAAAAACTTGCAATGTCACATGAAAAACCATGGGAAGGCATCGATTCCGTTTATGTGTGATATCTGTGGGAAGACATTTACCCAGAAGGGCACACTTACGATACACACCAGGTTGCACACGGGAGAACGGCCGTATACTTGTCAGCTTTGTCAGAAAGGTTTCGTGGATAAGAATGAGATGCGACGCCATTACAATATGCATTTCAATCCACAAAGCAAGTTGTACATTCCAAACGCGGAGCAGATCGCTTCCCCGGTGGATATAGGGGCACAGGGCAAGAAGTACAAGCAATATACCTGCAAGATTTGTGGCCGTCAACTTACCACCTCGACTGCATTAGCGAAACACATTACAACACATACGGgtgagaaaaaatatcaatgtgATTTCTGCGATAAGCGTTTTGCTCAGGGTGGACAACTGACGGTTCACCGAAGAATACATACCGGTGAGCGGCCGTTTGCGTGTGAGAATTGTGGCCAGCGTTTCGTTGGAGGAAGCAACTATAAGCGACATGTGAAGCAAAGTATGTGTAAACCTGTGCTTCCTGAGTTGGTGGCAAATTTGCCAAACCCAACCATTGTGGATGGAATGCCCATCGTCGATGAAATGGACAGCGAGGAAAGGATTTACCCTGTTCTTGTAGAAATGATTTAG
- Protein Sequence
- MLLRHVIPTNNDVEEIYIVKQEEEQTGPNSNPLAAASSSRHGGLLPTSLLENEDVEIKDEPLSIHGSDEEDEVYERYDPPTPLLHPIPVEIKLVKVEDIPKKLELLVKNEQEHPVQQATKENKPELQKTQDHLRDVKRETSVSSDGDWARDDCVPLAKRVQKSTRGRRRKVDVKKEKNDTDSEVSLDGHTDDYDYKPPLDGIKKEKKQRKRQRKKVKSDVEKDGSEESEGEDVVKCFICVSDLKEPWELIKHLRREHKGLLPFKCAVCVSREIHKLKELNLHFRQHDENRKHKCLYCAARFHSAQAQSSHMRRMHNEKYNMDMEKYRRFVCRFCGKKFTKKHDHETHEKRHIRENTNDAEFLKRELKCYICNDFVGGSREDLNTHVTLHNKEWLPYHCQKCDNKKITTARVLCEHLRQHEEGLAVKCVYCEERFVTLAACQAHERSHAAEKEADELLDAKIIAETHNANVVVVDGQKRFQCDKCDRSYTLFSSLRKHQNLHTKSNAFVCSKCGRAFIKASSLALHERRNHDENANFSCEGCGKTFRTIGHLLDHRTRTQHYAGKPYICEGCTTTFRLPEELKEHQETCSETEANRPCFCGLCSNNFDSLAQALEHVKIDHDPEIPETKCRYCDLTFRDAERIVEHEFKHTLPGIMTCTLCNRIFKHLKNLQCHMKNHGKASIPFMCDICGKTFTQKGTLTIHTRLHTGERPYTCQLCQKGFVDKNEMRRHYNMHFNPQSKLYIPNAEQIASPVDIGAQGKKYKQYTCKICGRQLTTSTALAKHITTHTGEKKYQCDFCDKRFAQGGQLTVHRRIHTGERPFACENCGQRFVGGSNYKRHVKQSMCKPVLPELVANLPNPTIVDGMPIVDEMDSEERIYPVLVEMI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -