Trut018463.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- ZBTB9
- Assembly
- GCA_029784135.1
- Location
- CM056648.1:106336584-106338654[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.024 2.7 10.2 0.1 2 23 247 269 246 269 0.94 2 13 2e-05 0.0023 19.9 0.2 2 23 276 297 275 297 0.96 3 13 0.18 21 7.4 0.6 2 23 305 327 304 327 0.92 4 13 0.00036 0.041 16.0 0.1 1 19 345 363 345 368 0.95 5 13 1.7e-05 0.002 20.1 0.8 2 23 375 396 374 396 0.97 6 13 1.8e-05 0.0021 20.0 0.1 1 23 402 425 402 425 0.96 7 13 2.7e-05 0.0031 19.5 0.8 1 23 434 456 434 456 0.99 8 13 0.14 16 7.8 0.2 2 23 476 498 475 498 0.92 9 13 0.0073 0.83 11.8 0.6 1 23 506 528 506 528 0.95 10 13 1.8 2e+02 4.3 2.5 1 23 532 555 532 555 0.95 11 13 0.00068 0.078 15.1 1.5 3 23 567 587 566 587 0.98 12 13 5.1e-05 0.0058 18.6 4.2 2 23 593 614 592 614 0.97 13 13 0.03 3.5 9.9 0.1 2 21 621 640 620 641 0.92
Sequence Information
- Coding Sequence
- ATGCGTTGCGTTGTACCGAACTGTAAGAACATGTCCCAGCAATGGCTAGCCCCGTTCCCTACCGATATACTGTTAAAGTATCGGTGGAAAGAATGCATCGAGATCGGGTCCGGCATACGTTTGCCGGATATGGAAACGGTCAACACGAAGCAGGATGGCGTTTGTAGTATGCATTTTCTCGGGTTTTCACCACAGGAGGATGAAACGTCATACCGCCAACCAACGCTGTTTTTTAGGGACGACATTGTGTTGGAGATAGAAAATTGTTGCTTATGCTGTCGTATGAATGTCAAGGAGAATATGCTGGAGAAAAGTGACTGCTTAAGGGGTGGTCATAGCATAGAAAAAATTGCTGCAACTATTCTTGGATCGTCATGTTTTGATGAGAACAAAACCACGCAGTACGTATGCGAAGAATGTGTTGTTAAGATAGACATGATATACGCATTCCAACGACAAATCGATAGCGGCAAAAGAGAACTCAAAAAACTGCAGCGAAGAATGGTGAGTGAGAATGTGTGTTTTCAGGGAAACGAAAATGTGCAAGCCGTGAAATACTCAGTTGAGATCAACATTGAGATAATTGCAAACGAAGCGGCGAAAGTAATTGAGAACGTAGAAGAAATAGTCATCAGTCAAACAAACACTAAATCAAGATCGACGGaaaataaaactgtaacgaagaGAAAGCAGCCTGACGACTCGTTAATCCGTGAGAAATTAGAAAAGTCCAAACTAAAATGTTATATTTGTGGTATTCAATTAGAAAGCCGATATGCATTGTTAAACCATTTGATGTTGACGCACACCGAACAGGATGCTTTGCGGTGTAATGAGTGTGGAATTAGTTTCAAACGATCGCCTGAATATAACGCTCATTTGGCGAAACATGATGCCGAGGCGCGTCCCTTAAAATGTAGTTACTGTCCGCTTAGATTTGCCAAGGTTTCTGGGAAAAAAGTACACGAGTACACGTACCACAGCTCCGAAAATGAAAATAGTACCAACGTGAAGAAGCCTAGGGCGAGAAATTACATGTGTCAAATATGCGGTGGGACATACCGTAGCCGAAGTGACCTTAATCGACATGATATCGTCCAGCATAAAGGAGAGACATTCGTGACATGTAAGACGTGTAACAAACCGTTCGCTTCCATGCGTAATTTGAAACGTCACCTGTTGATCCATCGTGGAGAACGACCTTACGTGTGTGAGGTATGTGGGGCTAGCTATCGCCAATCACAAAACCTAGTTGATCACAtgaatgaaaaacatagagaTGAGTCGACGGAGTTGAAATACGTTTGCAATGAGTGCAATGAACGTTTTGCCTCGACTCGATTATTACTAAGCCATCGCAGAACACATGAAGCCGATTATACTACGCTAGCTAGCCGTAATGGAGGCGAAGGAAGCAACAAGACTGTTTGTAATGTTTGTGGCACGTTATTCGACAGATCAAAGTTGATCGTAGATCATTTCAATTCCGAGCATCCAGAGCTACAGTTGGAGCACTACCCGTGCGGTTCATGTGACGAAGTATTCTTCAAAAAGCAGAACCTCCTCGTTCATTCCTATAAACATTCCGATCGGTTTGCATGTGATCAATGCGGGAACAGACACAATACACAAGCCAAGTTGGAAATACATCGACATAAAGTTCACGGAGTGCAAATCGCAGATGAATATTTCGAgaattgtcctcattgtagTAAAAAATATCCCAAAGGCAGTTTACTCGCGAGGCACGTGAAAACCCATTTCGAAGGTCAATGGAGCTGTGGAATCTGCGATAAAAATTTCACCGAGAAGCATCATTTAACGATTCACACGCGTAAGCACACTGGAGAGAAACCGTTGGTATGTACTGGTTGTAACGAACGTTTCGGAGATCCTACCGTTCTGTCGAAGCATAAGAAACGTTGTGAGTTATTCAAATCGAAGCATAAATGA
- Protein Sequence
- MRCVVPNCKNMSQQWLAPFPTDILLKYRWKECIEIGSGIRLPDMETVNTKQDGVCSMHFLGFSPQEDETSYRQPTLFFRDDIVLEIENCCLCCRMNVKENMLEKSDCLRGGHSIEKIAATILGSSCFDENKTTQYVCEECVVKIDMIYAFQRQIDSGKRELKKLQRRMVSENVCFQGNENVQAVKYSVEINIEIIANEAAKVIENVEEIVISQTNTKSRSTENKTVTKRKQPDDSLIREKLEKSKLKCYICGIQLESRYALLNHLMLTHTEQDALRCNECGISFKRSPEYNAHLAKHDAEARPLKCSYCPLRFAKVSGKKVHEYTYHSSENENSTNVKKPRARNYMCQICGGTYRSRSDLNRHDIVQHKGETFVTCKTCNKPFASMRNLKRHLLIHRGERPYVCEVCGASYRQSQNLVDHMNEKHRDESTELKYVCNECNERFASTRLLLSHRRTHEADYTTLASRNGGEGSNKTVCNVCGTLFDRSKLIVDHFNSEHPELQLEHYPCGSCDEVFFKKQNLLVHSYKHSDRFACDQCGNRHNTQAKLEIHRHKVHGVQIADEYFENCPHCSKKYPKGSLLARHVKTHFEGQWSCGICDKNFTEKHHLTIHTRKHTGEKPLVCTGCNERFGDPTVLSKHKKRCELFKSKHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -