Basic Information

Insect: Toxorhynchites rutilus
Gene Symbol: -
Assembly: GCA_029784135.1
Location: CM056649.1:103251860-103253863[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.039 4.5 9.5 0.9 2 23 193 215 192 215 0.94

2 14 2.8e-05 0.0032 19.4 2.2 1 22 227 248 227 248 0.96

3 14 0.00068 0.078 15.1 3.7 1 21 253 273 253 275 0.94

4 14 0.037 4.2 9.6 2.3 2 23 283 305 282 305 0.94

5 14 0.0057 0.65 12.2 0.9 1 22 317 338 317 338 0.96

6 14 0.027 3.1 10.0 0.4 1 20 342 361 342 363 0.91

7 14 0.067 7.7 8.8 0.5 2 23 375 397 375 397 0.92

8 14 2.2e-05 0.0026 19.7 1.0 1 22 411 432 411 432 0.95

9 14 2.7e-05 0.003 19.5 0.9 1 23 439 461 439 461 0.98

10 14 0.00098 0.11 14.6 6.1 1 23 467 489 467 489 0.97

11 14 1.9e-05 0.0022 20.0 2.8 1 23 497 519 497 519 0.95

12 14 8.3e-05 0.0095 18.0 0.9 1 23 525 547 525 547 0.98

13 14 1.9e-05 0.0022 20.0 0.5 3 23 555 575 553 575 0.98

14 14 7.9e-06 0.0009 21.2 1.9 1 23 584 607 584 607 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.039	4.5	9.5	0.9	2	23	193	215	192	215	0.94
2	14	2.8e-05	0.0032	19.4	2.2	1	22	227	248	227	248	0.96
3	14	0.00068	0.078	15.1	3.7	1	21	253	273	253	275	0.94
4	14	0.037	4.2	9.6	2.3	2	23	283	305	282	305	0.94
5	14	0.0057	0.65	12.2	0.9	1	22	317	338	317	338	0.96
6	14	0.027	3.1	10.0	0.4	1	20	342	361	342	363	0.91
7	14	0.067	7.7	8.8	0.5	2	23	375	397	375	397	0.92
8	14	2.2e-05	0.0026	19.7	1.0	1	22	411	432	411	432	0.95
9	14	2.7e-05	0.003	19.5	0.9	1	23	439	461	439	461	0.98
10	14	0.00098	0.11	14.6	6.1	1	23	467	489	467	489	0.97
11	14	1.9e-05	0.0022	20.0	2.8	1	23	497	519	497	519	0.95
12	14	8.3e-05	0.0095	18.0	0.9	1	23	525	547	525	547	0.98
13	14	1.9e-05	0.0022	20.0	0.5	3	23	555	575	553	575	0.98
14	14	7.9e-06	0.0009	21.2	1.9	1	23	584	607	584	607	0.98

Sequence Information

Coding Sequence: ATGGACATTCTGATTGAACCAGACTGTTTCAAAATATGTCGTATATGTATGGAGAATTGCGAAGACGACTTTATATGCGTGTATGACGAGTTCGAGGACAATATCCTGATGGACGTTATCACTGAATGTGCCCGTATAGAGataagaaaggatgatgcattGCCACGGAACGCTTGTCGAAACTGTGCCGAGTATATGATAATTGCCTACCACATTATTCAAAAGTGTCGTGATTCGGACCAAACACTGAggaacattttcaaacatgaGATTGATTTTCGCAGCCGAGAAGAGCAAAACTACAATGCGGCTAATATTCACGTAGAAGACATCAATCCGGCGGAGTATGCTTTTCTGCTTTCGGATGCGTATGACAACATAATGTTGGAAACTGTGGATGGACTAATTGTGAAGCCGACCAACGAAGTGGATCCTGGAGAGTTCCAAAACAACGCACATTATGGTGAAAATGAGCAGTTGGATAACGAACAAGAAGGAAACGCAGAAATAGGGGAAATTCAAGGAAAATATCCGCTAGAAGCAGAACCACAGTATTCAGTCTTTCACGGCAGGCAAAAATGTTGTGGCTGTAAATCAGAGTTCGATGATGAAACCGATCTGAAGAATCATATTGAGTTGgttcattcgaaaaattcagACAATTGCGATACCAAACCATTCAAATGTTCTACTTGTTATAAATCCTTCTCCAATCAGCAACTTCTAAAGGAGCACCAACGAAGCGCGGTTCGTAAGTATTTTTGTCGTCAGTGTGGGAAAGGCTTCATGACCCAAGAAAATCTTACGAATCACCTCAAATGTCATGTTTCTTCGGGGGAAACCAAAAAGTGCTGCGGTTGTCGCAAAGATTTCAGTTCCGAAACAGAGCTTCTAATGCACTCGCGAGAGGTGCACAGGCCTGAGCAAACTTCAAATCAAGATAAGCCCTATGAATGTGAAACTTGCTTTCGGCGATATCCAACTCGCAAATCACTTGTGAGTCACAAGCGGATGATACAGCAGCATCAGTGCCCACGCTGTGGAGAAGTGTTTATGAAGAAATTGTTCCTAACATTACATGAGCAGTCTTGCCGATCAGACGAGCGCGAGGATAGTAACAGACGGTGCTGTGGCTGTCGTTTGGAGTTTCCTAACCAAGGAGCATTACGAGAACACGCTTTGCTCACCCACAAACCTAACGATCATCAGGAGCGAGATGACACAAAATCCTTTGAGTGTGAAATTTGCTACAGACGCTTCTCCTCGAAACCAAATCTGCAGCAGCATCAGAAAAAGGCGAATCAAGAGAAACGCTACGAATGTGAGATATGTGGACGCTCTTTCAGTCGGGCCCACGATAAAGCTACTCACGTTACTACGCACTCGAACGAAATGCCGTTTTCGTGCCAGCTCTGCCATCGGAAGTTTAAAAACAAGCTCTACCTCAAAAACCATTTGAAGCTGCATGCTACAAGCGAGTCGAAAAATTTTGCTTGTGCAAAATGCGGAAAATGTTTCCGAACGAAGGATCTCCTTAAAACACATTCGATCAGTCACAGCGAAGAACGCAAGTACGCTTGTAGCGTATGTCCGGCAACGTTCAAGCGATTGCAGTGCCTTAAAATCCACATCAAAGTTCACACAAGGGAGAAAGCGTTCGGTTGTAATATTTGCGCGAAACGATACGTTCAGTCGTCGGATTTAAAGCGTCATTTACTGACCCACAACCCGGGTGAGAGTGGTAAACCCTTCCAATGTGAATACTGTTTGAAGCGATACCCGAGGAAGGATTATCTCAAAGTGCATATACGCAAGCAACATTTGAACAACGTTGATATGATACTGATCGATGAGGCAGCGCTCGAACTTAGAGGCAATGGCAGTGATAGTGATTTACTGGTTATTTAA
Protein Sequence: MDILIEPDCFKICRICMENCEDDFICVYDEFEDNILMDVITECARIEIRKDDALPRNACRNCAEYMIIAYHIIQKCRDSDQTLRNIFKHEIDFRSREEQNYNAANIHVEDINPAEYAFLLSDAYDNIMLETVDGLIVKPTNEVDPGEFQNNAHYGENEQLDNEQEGNAEIGEIQGKYPLEAEPQYSVFHGRQKCCGCKSEFDDETDLKNHIELVHSKNSDNCDTKPFKCSTCYKSFSNQQLLKEHQRSAVRKYFCRQCGKGFMTQENLTNHLKCHVSSGETKKCCGCRKDFSSETELLMHSREVHRPEQTSNQDKPYECETCFRRYPTRKSLVSHKRMIQQHQCPRCGEVFMKKLFLTLHEQSCRSDEREDSNRRCCGCRLEFPNQGALREHALLTHKPNDHQERDDTKSFECEICYRRFSSKPNLQQHQKKANQEKRYECEICGRSFSRAHDKATHVTTHSNEMPFSCQLCHRKFKNKLYLKNHLKLHATSESKNFACAKCGKCFRTKDLLKTHSISHSEERKYACSVCPATFKRLQCLKIHIKVHTREKAFGCNICAKRYVQSSDLKRHLLTHNPGESGKPFQCEYCLKRYPRKDYLKVHIRKQHLNNVDMILIDEAALELRGNGSDSDLLVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -