Trut033648.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Toxorhynchites rutilus
Gene Symbol
-
Assembly
GCA_029784135.1
Location
CM056649.1:21136894-21152793[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 0.0038 0.43 12.7 2.7 1 23 41 64 41 64 0.94
2 38 0.58 66 5.9 7.5 1 23 69 92 69 92 0.95
3 38 0.18 21 7.4 1.9 2 23 99 121 98 121 0.92
4 38 0.00035 0.04 16.0 0.1 1 23 293 316 293 316 0.93
5 38 6.5e-06 0.00075 21.4 0.4 2 23 329 350 328 350 0.97
6 38 0.0039 0.44 12.7 0.9 1 23 361 384 361 384 0.95
7 38 3.8e-06 0.00043 22.2 2.5 1 23 393 415 393 415 0.98
8 38 0.024 2.8 10.2 0.4 1 23 438 461 438 461 0.93
9 38 0.00037 0.042 15.9 5.9 1 23 473 495 473 495 0.98
10 38 0.0015 0.17 14.0 0.5 1 23 506 529 506 529 0.93
11 38 3.4e-06 0.00039 22.3 3.6 1 23 541 563 541 563 0.98
12 38 0.0018 0.2 13.8 0.5 1 23 572 595 572 595 0.93
13 38 0.011 1.2 11.3 6.0 1 23 607 629 607 629 0.99
14 38 0.00081 0.093 14.8 2.4 1 23 675 697 675 697 0.98
15 38 0.00042 0.048 15.7 1.3 1 23 715 738 715 738 0.94
16 38 0.0042 0.48 12.6 3.0 1 23 750 772 750 772 0.99
17 38 1.9 2.2e+02 4.2 0.9 1 12 782 793 782 805 0.72
18 38 0.013 1.5 11.0 3.6 1 23 817 839 817 839 0.98
19 38 3.5e-05 0.0039 19.2 0.7 1 23 853 876 853 876 0.96
20 38 0.025 2.9 10.2 2.5 1 23 888 910 888 910 0.98
21 38 0.79 90 5.4 1.9 1 23 920 943 920 943 0.92
22 38 0.0027 0.31 13.2 2.8 1 23 955 977 955 977 0.98
23 38 0.0032 0.37 13.0 1.4 1 23 996 1019 996 1019 0.95
24 38 0.0032 0.37 13.0 2.6 1 23 1031 1053 1031 1053 0.97
25 38 0.025 2.9 10.2 1.4 1 23 1064 1087 1064 1087 0.95
26 38 0.00033 0.037 16.1 3.1 1 23 1099 1121 1099 1121 0.99
27 38 4.7e-05 0.0054 18.7 0.7 1 23 1132 1155 1132 1155 0.96
28 38 0.0018 0.2 13.8 5.1 1 23 1167 1189 1167 1189 0.96
29 38 5.5e-06 0.00062 21.7 3.5 1 23 1195 1217 1195 1217 0.98
30 38 7.7 8.7e+02 2.3 2.1 1 23 1223 1246 1223 1246 0.89
31 38 0.0014 0.15 14.1 0.3 3 23 1401 1422 1400 1422 0.96
32 38 1.8e-05 0.0021 20.0 0.1 1 23 1434 1456 1434 1456 0.97
33 38 0.0016 0.18 13.9 0.6 1 23 1468 1491 1468 1491 0.95
34 38 0.0089 1 11.6 0.4 2 23 1712 1734 1712 1734 0.94
35 38 0.0025 0.28 13.3 1.9 2 21 1747 1766 1746 1768 0.93
36 38 0.0044 0.51 12.5 0.3 1 23 1780 1803 1780 1803 0.95
37 38 3.1e-05 0.0035 19.3 0.7 1 23 1815 1837 1815 1837 0.98
38 38 0.0004 0.046 15.8 0.3 1 23 1843 1865 1843 1865 0.98

Sequence Information

Coding Sequence
ATGAGTGAATTAAATTTTGAATCACCGAACAGCTATTCGGAGGGGAAGAATCGATCTGCCCGGGATAGGAAACAATCTCAAGATATCGATATTCGTATAAACGATGATGGGTCCAAATCATTCATCTGCAAAGAATGCGATAAAGCGTTCCGCTTTAAATCGTCTTGCATTCGGCACATATCTCTCATGCATAGAGCGAAAGTGTACCAATGTGAACACTGTGacgagatttttcaacagtCTTGCAAATATCGCACACATTTCAAACAAAAGCACCCTGATCAGCATAAGCTTGAATGCAGCGTGTGCAAAAGGCGCTTTCAGCTCGCTCATCACCTTGGCAGACACTGGACTGTGGAGCACCAAGCAATCCATGGTCCGTATATGAAACCTGACGTAAAACTGTTGGAAATAAAAACAGAGATCTCAGATGAAGCTGAAAACGAAGCAACCATTGGTTCAACAATGGAATCTGCAAACCGTCATGCTGCCGATGGTATGCAGGATTTTTCGATTGACCAAATTGATATTAAAATGGAATTCGAGTGCACATCTCCCCAACTGCAGGAAACTGAAATTGAAGAGAAGCCGGATTTCTCCAAGTTGAATCAAAGGCAAGATAACGTAACAACCGTAAAAGCAGAACCTAACCGTTCTGGAGCAACGGATAACAATTTTGTCGATCGTGTTAAAGTCAAGAGTGAACAGGATAGCATAAATGATGACCCCGCAAATAGCAACCTTCAGTTAACTGTCCAGTCATACCCGGTGGGAAATTGTTTGGCTTCACACGTCGATATTGAAGAAGAACAAAAACATCTGGAGAGTTTAACCACATCGAATGGTAACGAAAACGTATCAAAGAAATCTGTTCGATATAGTTGCGATATTTGCGGGAAAACATTTGCCCGTCCGATAAGACTCGTCATTCATCGAACCTTGGAACATGGAATTGAGGATGCTGATAATCCTCTACCTCACTTACCGTGTAATGTATGCGGTAAAGTGTTTCGTTACAAGTTTGGTTTATCGTTACACATGAAAACGCATGCAGATCAGGCAACGAAGGATGCCATCAGGCATAAATGTGAGATTTGCGAAAAAACATTTGTCGTTCGGATGAGACTCGTCAGGCATCGGGCGTCGGTACATGGAATTGATGATCCTCTGCCTCGTTATACCTGTGAAATATGCGGTAAAGTTTTCCATTACAAGGCTAATTTTTCGAGGCATATGAAGTGGCATAGCGACAAAAAcccgaaaaacaaacaaactcaACAAAACTCAGAAAAATCAACGAAGCCCAAGAGGCATAAGTGCGATAATTGTAACAAAACATTTTACCTTCCGATAAGACTCGCAGTTCATCGGGCGGTGGCACATGGAATTGAGGATGTTGAGAATCCTCTGCCTCGCTATACTTGTCATATATGCGGTAAAGTTTGCCGCTACAAGTTTGATTTTTCGGCGCATTTAAGATACCATGCGGACAAGGCAGCGAAGAATATCTACAGACATAAATGCGAGACTTGTGGAAAAACATTTCCCTCTGCGATGAGACTCGTCAATCATCGGGCGTTGGTACACGGAATTAAGAATGCCGATAATCCTCCGCCTCGCTATACCTGTGATAAATGCGATAAAGTTTTTCGTCACAAGGGTAATTTCACGATGCATATGAAGGGGCATTTAGAAGGAGCGAAGCCCAAGGGGTATAAATGCgataattgtgaaaaaacatttgcCCGTTCGATGAGACTCGCCATTCATCGGGCGTTGAAACATGGAATTGAGGATGCCGATAATCCTCTGCCTCGCTATACTTGTGATACATGCGGTAAAACTTTCCTTCACAAGTTTTATTTTCGGTCGCATCTGAAGTCCCATGCTGAGAAGGCAGCAAACGATGTCGTCAAGCATAAATGCGACATTTGTGAGAAACCGTATTATTGCCGGATGAGACTCGCCATTCATCGAGCGTTGGAACACGGAATTGAGGATCCCGATAATCCTCTCCCTCGGTATACCTGTGATAAATGCGGTAAAGTTTTCCTTCACAAGGCTCAATTTTCGATGCATATGAAGGGGCATTTAGGGAAGATATTGAATGGTGACAAAAACTTATCAAGGAAGCCCAACAAGCATAAGTGCGACATatgtgaaaaaacattttacCGTCAGATAAACCTCGATGTCCACAGGGTGAGAATACACGGAATTGAGGATGCAGATAATCCTCTGCCTCGCTATACTTGTGATACATGCGGTAAAATTTTCCTTAACAAGTTCTATTTTCGGTCGCATCTGAAGTCCCATGCAGATAAGGCAGCAAATGATGTCAAGCATAAATGTGACATTTGTGGGAAACCGTGTTATTGGCGGATGAGACTCGCCATTCATCGAGCGTTGGAACACGGAATTGAGGATGTCGATAACCCTCTCCCTCGGTATACCTGTTATAAATGCGGTAAAGTTTTTCTTCATAAGGCTAAATTTTCGATGCATATGAAGGGGCATTTAGGGAAGATATCGAATGGTGACAAAAAGCCCAATAAGTATAAGTGCGAAATatgtgaaaaaacattttacCGTCAGATGAACCTCGTTCTCCACAGGGCGAGAGTACACGGGATTGAAGATACGGATAATCCTCTGCCTCGCTATACTTGTGATACATGCGGTAaaattttccttaacatgtttTATTTTCGGACGCATCTGAAGTCCCATGCAGATAAGGCAGCAAATGATGTCAAGCATAAATGTGACATTTGCGAGAAACCGTGTTATTACCGGATGAGACTCGCCATTCATCGAGCGTTGGATCACGGAATTGAGGATCCCGATAATCCGCTCCCTCGGTATACCTGTGACAAATGCGGTAAAGTTTTCCTTCACAAGGCTAAATTTTCGATGCACATGAAGGGGCATTTAGGGAAGACATCGAGTGGTGACAAAAACTTATCAACGAAGAAGCCAAATAAGCATAAATGCGACATatgtgaaaaaacattttacCGTCGGATAAGACTCGTTGTCCATAGGGCGAGAGTACACGGAATTGAGGATCCAGGCAATCCTCTGCCTCGCTATATCTGTGAAATATGCGGTAAAGTTTTCCTTTACAGGCATAATTTTTCGTCCCATTTAAAGTACCACGAGGACAAGGCAGCGAATGATGGCATCAGATATAAATGCGACAgttgtgaaaaaacatttcacagTCAGCTGAGACTCAATGTTCATCGGGCGGTTGCACATGGAATTGAGGATACGGGCAATCCTGTACTCTACTTTACGTGCGATGTGTGCAGTAAAGTTTTCAGCGACAAAAATGATCTTTCGTGTCATATGAAGACGCATGCAGAAAAAGCAGCAAAGGATCCCATCAGGCATAAATGCAATGATTGTGATAAAAGCTTCAACCGTCCGTTCAGACTTGTCGTTCATCAGGCGGTTGCACACGGAATTGAGGATGCAGCTAATCCTCTACCCCACTATACGTGCGATATATGCCACAAAGTTTTCCGTCACAAGCGTGATTTTTTGTTGCACAAGGTGATGCATTCAGATAAGCGTGACTTTTCTTGCTCGTACTGCGATTGTTCGTTCGTGAGAAAAAATTCCTTGGTTCGTCACATGCGAATCCATACGAAGAATTATATACATAAATGTCGTTTCTGTAATTATGGATCGTTTAGGAGGAAGGATTTGTTGTTACACGAGGCAAATGTTCATAACTGTGAAAATGTGGAAACCTCTTCAAAGTCCCCACTTGATGACTACGAATCACAACAAGGAACTGATGGTAACATGAAGTGTGAGCAGGGCGATCAGAATAGCATTAAAACCGAATTCGAGTGCACATCTCCTCAATTACAGGAACCCGCAACTGCGAATGAATTCACTAGAGAGGAGGATGTTatttcaaccGAGTTTCTAATCCCACAGACTATAACCTTAAAGGAGGACACTAGCCAATTTGAAGCCACGAATGACGATGTTGGCGACCGTGTTGAAGTCAAAAGTGAACAGGATTGCGCAGATGATGTTCCTGTAAATACCAATAAACAGTCATCCGACCCCGTGGGAGATGGTTTGGTTTCACAAACAAAGATtgaagagaaacaaaaacatcGGAGAAGCTCAACCGCTTCGAATGGTAATAAAAGCCTATCAGAGAAACGCATCAGGCATGGATGCGAtatttgtgaaaaaacattttcccGTCCGAAAAGACTCATCGTTCACCATGCGGTTGCACATGGAATTGAGAATGCTGCTAATCCTCTGCCTCGCTACCCTTGTGATACATGCGGTAAAGTTTTTCGTTACTGGCCTGATTTTAGGGCGCATGTGAAGTGGCATGGAGACAAAAATTTGTTAAAGAAACCAAACAGACATAAATGCGACATTTGTGAAAAAACTTTTTACCGTCCGATAAGACTTGTCACTCATCGGGCGGTGGCACATGGAATCGAGGATACCGATAATCCTCCACCTCAATTTAGGTGTAATATATGCGCATCGAATAGTGGCCGGAGATTATCAAAGAAACCCATAATTAAGACGCATTCGAAAAAGCATCTTGTCTCCTTTTCTTGTTCGTACCGCAATCGATTGTTtgcgagaaaaaataaattggatcATCATGTACAAATCCATATGTTATCACACGAAGCAAATGCTCATAactttgaaaatgtggaagCCTCGTCGAAGTCCCCACTTGAAGACTTCGAATCGCAGCAAAAAACTGACGGGAACATTGAGTGTGAGCAGGGTGATCAAAATAGTATTAAAACCGAATTCGAGTGCACATCTCCTAAAGTGCAGGAAACTGCAACTGTGGAAAAATTTACTCAAAGGGAGGATAGTGCAATACCCTTGAAGGAGGACACCAGTCAATTCGAAGCCACGAATGACGATGTTGGCGACCGTGTTGATGTGGAAAGTGAACAGAATTGCACAAATGGTGTTCCTGATAATACCATCATTCAGTTATCCGTTCCGTCATACCCCGTGGGAGACAGTTTGGCTCCACAAACAACGATTGAAGAGAAACAAAATCATCGAAGAAGTATAACCGCTTCGAacggtaaaaaaaaatcatcggagAAACTCGTAAGACCTAGATGCGATATTTGCGGTAAAACATTTCTTCGGCCGAGAAGACTCAACGTGCATCGGACAGTGGTACATGGAATTGAGGATGCTGCCAATCCATTACCTCACCTCATGTGTGATACATGCGGTAAAGTTTTCCGTTACAAGCCTGATTTATCGTCTCATTTGAAGTGTCATAGTGACAAAAAACTGTTAAGGGAACCAATCAGACATAAATGCGATATTTGTGAAAAAACGTTTGGCCGTCCAACTATACTCACCGTTCACCTTGCGAAAGCGCATGGAATTGAGGATGCTGCTCATCCTCTACCCCACTTTACGTGTGATACATGCGGTAAAGTTTTCCGTTACAAACCCTTTTTAGCGATGCATATGAAGTGGCATTCAACTAAGCGTAAGTTTTCTTGCTCGTACTGCGATAGATCGTTTGCGAGTgaagttattttgaatcgtCACATACAAATCCATACGAAAGATGATATGTTATCACACGAAGCAAATGCTCATAACTATGAAAATGTGGAAGCCTCGCCGAAGTCCCCACTTGAAGACTACGAATCACAGCATAGAACTGAAGGGGACATTGAATGTGAGCAGGGTGATCAAAATAGTGTTGTAAGTCTTTGTTGCGAAAGGGTTTGA
Protein Sequence
MSELNFESPNSYSEGKNRSARDRKQSQDIDIRINDDGSKSFICKECDKAFRFKSSCIRHISLMHRAKVYQCEHCDEIFQQSCKYRTHFKQKHPDQHKLECSVCKRRFQLAHHLGRHWTVEHQAIHGPYMKPDVKLLEIKTEISDEAENEATIGSTMESANRHAADGMQDFSIDQIDIKMEFECTSPQLQETEIEEKPDFSKLNQRQDNVTTVKAEPNRSGATDNNFVDRVKVKSEQDSINDDPANSNLQLTVQSYPVGNCLASHVDIEEEQKHLESLTTSNGNENVSKKSVRYSCDICGKTFARPIRLVIHRTLEHGIEDADNPLPHLPCNVCGKVFRYKFGLSLHMKTHADQATKDAIRHKCEICEKTFVVRMRLVRHRASVHGIDDPLPRYTCEICGKVFHYKANFSRHMKWHSDKNPKNKQTQQNSEKSTKPKRHKCDNCNKTFYLPIRLAVHRAVAHGIEDVENPLPRYTCHICGKVCRYKFDFSAHLRYHADKAAKNIYRHKCETCGKTFPSAMRLVNHRALVHGIKNADNPPPRYTCDKCDKVFRHKGNFTMHMKGHLEGAKPKGYKCDNCEKTFARSMRLAIHRALKHGIEDADNPLPRYTCDTCGKTFLHKFYFRSHLKSHAEKAANDVVKHKCDICEKPYYCRMRLAIHRALEHGIEDPDNPLPRYTCDKCGKVFLHKAQFSMHMKGHLGKILNGDKNLSRKPNKHKCDICEKTFYRQINLDVHRVRIHGIEDADNPLPRYTCDTCGKIFLNKFYFRSHLKSHADKAANDVKHKCDICGKPCYWRMRLAIHRALEHGIEDVDNPLPRYTCYKCGKVFLHKAKFSMHMKGHLGKISNGDKKPNKYKCEICEKTFYRQMNLVLHRARVHGIEDTDNPLPRYTCDTCGKIFLNMFYFRTHLKSHADKAANDVKHKCDICEKPCYYRMRLAIHRALDHGIEDPDNPLPRYTCDKCGKVFLHKAKFSMHMKGHLGKTSSGDKNLSTKKPNKHKCDICEKTFYRRIRLVVHRARVHGIEDPGNPLPRYICEICGKVFLYRHNFSSHLKYHEDKAANDGIRYKCDSCEKTFHSQLRLNVHRAVAHGIEDTGNPVLYFTCDVCSKVFSDKNDLSCHMKTHAEKAAKDPIRHKCNDCDKSFNRPFRLVVHQAVAHGIEDAANPLPHYTCDICHKVFRHKRDFLLHKVMHSDKRDFSCSYCDCSFVRKNSLVRHMRIHTKNYIHKCRFCNYGSFRRKDLLLHEANVHNCENVETSSKSPLDDYESQQGTDGNMKCEQGDQNSIKTEFECTSPQLQEPATANEFTREEDVISTEFLIPQTITLKEDTSQFEATNDDVGDRVEVKSEQDCADDVPVNTNKQSSDPVGDGLVSQTKIEEKQKHRRSSTASNGNKSLSEKRIRHGCDICEKTFSRPKRLIVHHAVAHGIENAANPLPRYPCDTCGKVFRYWPDFRAHVKWHGDKNLLKKPNRHKCDICEKTFYRPIRLVTHRAVAHGIEDTDNPPPQFRCNICASNSGRRLSKKPIIKTHSKKHLVSFSCSYRNRLFARKNKLDHHVQIHMLSHEANAHNFENVEASSKSPLEDFESQQKTDGNIECEQGDQNSIKTEFECTSPKVQETATVEKFTQREDSAIPLKEDTSQFEATNDDVGDRVDVESEQNCTNGVPDNTIIQLSVPSYPVGDSLAPQTTIEEKQNHRRSITASNGKKKSSEKLVRPRCDICGKTFLRPRRLNVHRTVVHGIEDAANPLPHLMCDTCGKVFRYKPDLSSHLKCHSDKKLLREPIRHKCDICEKTFGRPTILTVHLAKAHGIEDAAHPLPHFTCDTCGKVFRYKPFLAMHMKWHSTKRKFSCSYCDRSFASEVILNRHIQIHTKDDMLSHEANAHNYENVEASPKSPLEDYESQHRTEGDIECEQGDQNSVVSLCCERV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-