Basic Information

Gene Symbol
Hr38
Assembly
GCA_029784135.1
Location
CM056649.1:49117962-49145128[+]

Transcription Factor Domain

TF Family
ESR
Domain
zf-C4|ESR-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.03 8.8e+02 1.0 2.1 216 254 212 250 201 257 0.70
2 2 3.6e-39 1.1e-34 122.1 0.0 1 268 696 954 696 958 0.92

Sequence Information

Coding Sequence
ATGTACACAGCTTATGTTGCCACAGGTCCTCGCCAGGGCGAAGAAAGTGAACCATACCGATCGGCTCTCCCACAACCAGTCAAGCGGCGTGGCGTGATGATTCCCATCATCATCACCTTTTCCCGATTCATCCCCCACGGCCGGGACCCCACAGGGGCCAGACTATTAGAAGCCGTCTTGTTTTCCGCCGTGTCGCGCTCATGTTTGATGACGATATCAGGGTATGCCACCAACCGTAACTTTCAAGGTGCTCCACAACTTCTCTCGCAAGTTGTAACATCACCAGTATCGAGTGCTGTACCCTCGTCGGCGGACACAGCAACGAGCACACCGCCACCGACGACGATCTTAACAACGCCAGCCTCGTCATCGTCCAGTGCAGCGGATAAAGGAGCCCTAGTCTCGCGTACCGGGGCCCAACTCAGTGGTGCAGGATCCGTGCGAAAGGATTCCGACGACAGTACAACGGATAGTGGCAACACCAGCATGTTACTGTTGCAACATCAGGCTACTtctttcagttccgtttcattTGATTATTTACTGTCGCAACAACCGCATCATCCCGAACAATCGTATCATCAACTAGGCTCATTTGGTACAACCCACACGCCACCACAaagtcaacaacaacaacatcagcagcagcagcagcaacaacaacaacaacaacaacagctcgTATCGGGGCTTCTGTCAAGCACCCATCAGCTTGACAAATTCGTCGAACTCTTCGGCGGTGCATCCCAATCGCAAACAACCGAAGAACCCATTTCCACCGAATCCTACCTTGATCAAACGCAACATTCCAACAGCTCCAGTGACACTTTGGTGGGACTCGAGGAAAATCCAACATTTGGAGAATCCAGCGATAGCATCCCGACTGCTCTACTCAAGGCTAGCTACAAAGAGGAAAACCTAGCCGAGCTTCAGGATCCGTTCAGTGCAGGTCCGTCGCGCGCACAAACCACCGAACCTGAAGCCGATCTACTGCTAGAGACATCTTCGACAGAAGAGTTGGGACTGCTTACTCTTCGCTCCAGCAGTGATCCCGTTCTCGCGAGTAGTGCTCGCCATCAGCCTCAGCCACACCAGCAACCGCAGCTGATCCACCAACAGCCGTTGCGATCCGGACTGCGACAGAACCCAGACGAGCAGGCAGCAAGCAGTAGTGGGGCCAGTTCCATTCTTCCAAGTTTCCAAGAAACCTATCCCATCAAATACAACCAGCTGGCGAATTTCGGCTTGAAAATGGATGAAGATTGCTTCAAAATTGCAGCTTCACCACACCATCAGGGTGTAAGCTATGGTCACCCCAGCTACGGACATCACCCAGCAGTCCATCAAGGACACTATGAATTCCCGCAGCATGCTCCAACACCGACCGCTCATTACAGTAACCCCACGTCCGGTGGCAGCTTCTATGCACCTGGGTACGAACAGCACGCAGCGGTAAGTCACACCCAGAAACCGTCCGCATCTGGCAGCACGTTAAATATTTCCGTTCCGCAGAACTACGCTGTAACGCCCCAAGATACCTACTCTCTTCCACCCTTCCCCACCATTGCCGAGCTGCACGTGTCCACCACGTGCTATCGTCGTGCTTCATTGCCGCTGCAACGGTCGGAATCCACCTCGAGCAGCGAAAGTCCCAAAGCGCCTAGAGTCGGCATCTACAAATATTCCGCTCTTCCAAGCGCCTCCAGTTCAGCGTCTAGCTCTCCTGGctacatcaacaacaacaacccaaACACGGTGAACAATAATGAAATAGCCGCAGCCGCAGCCGCCGCAGCTGCTACTGTATCTGCTGCGTCCGTTGTGAGCGCCACTCCAGTTCCTCGCGGTACAACTCCTCAAAGTCCATCTCAGCTGTGCGCTGTATGCGGGGACACTGCTGCCTGCCAGCATTATGGCGTGCGAACGTGCGAGGGATGCAAAGGGTTCTTCAAACGAACAGTACAAAAGGGATCCAAATACGTCTGCCTTGCGGACAAAGCCTGTCCCGTGGACAAGCGACGGCGGAATCGTTGCCAGTTCTGTCGATTCCAAAAATGTCTGGCAGTCGGAATGGTGAAGGAAGTCGTCCGTACCGACTCATTGAAGGGACGTCGGGGTCGACTGCCATCGAAGCCGAAATCGCCACAGGAATCTCCACCGAGCCCACCGGTTTCGATGATCACCGCCCTGGTGCGGGCCCACGTGGACACCACCCCAGATCTCGCCAGCCTTGACTACAGCCAATACCGTGAACCCGGTCAAAACGAACCTATCATTAGCGAAGCGGAAAAAGTGCAACAATTCTACAATCTCCTAACAACGTCGGTCGATGTGATCAAACAGTTCGCCGATAAACTTCCCGGTTTCAGTGATCTCAGCCCGGACGATCAGGAACTTCTGTTCCAGTCGGCCTCGCTGGAGTTGTTCGTCCTACGGCTATCCTACCGAGCGCGCATAGACGACACCAAGATGACATTCTGCAACGGGGTGGTCCTGCACAAACACCAATGCCAGCGCTCGTTCGGCGATTGGCTCAACGCCATCCTGGAGTTCAGCAAAAGCTTACACGGCATGGAGATTGACATTTCGGCATTTGCGTGTCTCTGCGCACTCACCCTCGTAACAGAACGCTACGGTCTGCGGGAGCCCAAAAAAGTTGAGCTACTGCAGATGAAGATCATCAGCAGTCTACGGGATCACGTGACGTACAATTCGGAGGCTCAGCGTAAGCCACACTACTTCAACCGACTGCTGGGGAAGCTTCCCGAGCTGCGGTCACTCAGTGTGCAGGGCTTGCAGCGGATATTCTATCTGAAGCTCGAGGATCTCGTGCCGGCACCACCCCTCATCGAGAACATGTTTCTCGCCAGCTTGCCGTTCTAG
Protein Sequence
MYTAYVATGPRQGEESEPYRSALPQPVKRRGVMIPIIITFSRFIPHGRDPTGARLLEAVLFSAVSRSCLMTISGYATNRNFQGAPQLLSQVVTSPVSSAVPSSADTATSTPPPTTILTTPASSSSSAADKGALVSRTGAQLSGAGSVRKDSDDSTTDSGNTSMLLLQHQATSFSSVSFDYLLSQQPHHPEQSYHQLGSFGTTHTPPQSQQQQHQQQQQQQQQQQQQLVSGLLSSTHQLDKFVELFGGASQSQTTEEPISTESYLDQTQHSNSSSDTLVGLEENPTFGESSDSIPTALLKASYKEENLAELQDPFSAGPSRAQTTEPEADLLLETSSTEELGLLTLRSSSDPVLASSARHQPQPHQQPQLIHQQPLRSGLRQNPDEQAASSSGASSILPSFQETYPIKYNQLANFGLKMDEDCFKIAASPHHQGVSYGHPSYGHHPAVHQGHYEFPQHAPTPTAHYSNPTSGGSFYAPGYEQHAAVSHTQKPSASGSTLNISVPQNYAVTPQDTYSLPPFPTIAELHVSTTCYRRASLPLQRSESTSSSESPKAPRVGIYKYSALPSASSSASSSPGYINNNNPNTVNNNEIAAAAAAAAATVSAASVVSATPVPRGTTPQSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSMITALVRAHVDTTPDLASLDYSQYREPGQNEPIISEAEKVQQFYNLLTTSVDVIKQFADKLPGFSDLSPDDQELLFQSASLELFVLRLSYRARIDDTKMTFCNGVVLHKHQCQRSFGDWLNAILEFSKSLHGMEIDISAFACLCALTLVTERYGLREPKKVELLQMKIISSLRDHVTYNSEAQRKPHYFNRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPPLIENMFLASLPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01461933;
90% Identity
iTF_01471460; iTF_01471571;
80% Identity
iTF_01471460; iTF_01471571;