Basic Information

Gene Symbol
snpc-4
Assembly
GCA_029784135.1
Location
CM056649.1:277156118-277163026[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.8e-10 7.4e-07 30.8 0.2 1 44 261 305 261 307 0.95
2 4 7e-12 2.9e-08 35.3 0.2 2 43 316 361 315 364 0.91
3 4 9.8e-08 0.00041 22.0 0.0 3 43 372 413 370 416 0.94
4 4 2.6e-06 0.011 17.5 0.1 4 44 425 472 422 474 0.90

Sequence Information

Coding Sequence
ATGTCTGAGTTCAATTCAGATTCGGAGAGCTGTCCCAGTTACTTAACTGAGTCGGAAAGCGAGCACGAGTCTGTCTGGGGTGAGGAAAAAGAGCAAAAGGAGGTAGATTACACGGCTACGGCCAAAGATATAATCTGCGAAAATGTAAACATCACAACGGAGAATGCACTGAATCTAAACAGCGGGTATCATAATATGCTTAAGGCACTTAAAAATAAACTAGAAATATTGCTGGTCCAGTGTCAGGAACGACAAGGGGAGATAGAAAAACAGATTTCGGAATATCGCAGCACTAAAAAACCGCTGGTAGGTAAGTCAAGGACATCCGGCTATATCTGTGGGCAGCCATATTTCAAGGACGAAGATCTGTACCCCGGACCTCACAACGATGATTATTTGTATCGGAAGAACGTTCGGAAAGAATTCTTCCCATTAGACATGTTCGAAGTAACGGACACCAACTGGACCATCAAAGATAAGGTTAATATTTTGAAGGGTGTAAAAACGCAGATCATTGAGTTCATCAGTGTAGAGAATCGATTGAAGATTAAAAAGATCGGAAACGGGCTGGAAGCGGAGAGGCTGAGGCGAGAAATTGTGTCCTTGAAAGGCAAGGAAATAGGTGTTTTGTGGGAGAAGGTTGAACTGTTCCCGAAAGAGTATCCCAGCCAAAAGTTTGAAATAGACTGGATGCGTATTTCAAATGTGAATATTAGTGGAAGGCATTCGGTAGCGGCTTGCATCGGAATTTGGAACAACTATATGATACCGGGATTGGTAAGGAGTAGTTGGAACCACAACGAAGAAAAACAACTGCTTGCGGCGACTGAAAAGTATCACCGCCAAAACTGGATTGAAATCGCCAAAGAGGTTCCAGGTAGATCCCCTTATCAGTGTTTCGTTCATTATCAGACAACATTCTCCGACTTGGCCCAGATCAAACACGAACGATGGACTGAGGAAGAAGACGAACTTTTAGTTAAACTAGTTGATGAAAACAGGATCGGATCAAACATAGTGTGGAACAAAGTTGTCGAAAAAATGCCCTTGCGGAACAAAATCCAATGTTACAATCGTTATATGTTTACACTTATGAGGCCAACGAAGAATACCAAATTTACTCCGGAGGAAGATTGTATTATCACCGCTTACGTGCAGGAGTGTGGCGATGAGTTTCGATTCATCCCCCCAAACTTACTCCCTGGAAGAACCAACCGTCAGATCTGGGCACGTTACAATCATACTTTGAAGTACGTTAACAAACATTCTGGCTGGACAATTGAGGAAGATTATCGGCTCATCAATTTTATTAGAGAAAATCTAACCGAGGAAGGACCCCGAAAAATATCGTGGGCTGCTTGTTCCAAAGCACTTGGGAATCATTCGCGTTTGAGTTGTCGAACTCGGTATTACACGATCGAAAAATTTCTCGAGAAAAACCCCGATGCCACACTGGATGACGTACCACGAAAGGAGAAAAGGCTCTCTACCAAAGTGAAtaacgaaaattggaagaaaaccaTGGTCGATATACAAACAGAATCAACATCAAGGGAAGCGGAGGATCAAGAGTTGCCTTCCACTTCTAGTGCCCCAAAAAAGGAACGGAAAGTTCGAAAGAAACGAGATCCTTTGTTTAAAAATCGACATTTTTCCGACACTATCAAATGTTTATTTAGAAAAAGGTTCTTCGCGAAGTTCAAACATTCGTTCCATTATAAGTTCGGCGATCAATTTCCGCCTAAAGAGAATCTCAAGATTTATTGCATCAATAAGGCAATATTTCATTTGTTACACTGTACAACTTCTTTCGAGCGAGTTAATGACTACTCTGAATTGTTCACTATCGATGAGATAAAGTTCATACGTGCCAGCCTCTCGATGAGGCTTAATCCAGGGTTAATAAATTACTTACAAAGTGCACGATACTGCTTTCTTTTTCCTCCAAATTACAACACTATTCTTGGACTACGAGGGATAGTCCTTAGTGCAACATACCCTGAAGAGGCAATGACAGAAGAAACTAATGAGACTCTAGTGCCGAATGAAACAGACTACCAGTATGCGCTGGAAAACTTTCGAAACCGCTTTCGCATGGTTTTCTTTTGGACAATGCTCCTGGTGAAACAAAATCCTAACGATGCAGATCTTCACAAAAGTGAAAACTGGGTAAAGACGAATGAAGAGCTCGAGAAACAAATTTCCCTCCAACAGTTGTCAAAATTACACAACAGTGCACGTTTGCGCCCATTAGAAGGATGTGAGAAGGATGTCCAAATCGAGACAAAACATGTCCAGGTGGCATCCAAAACCGGAATTTCTGAAGAAGCCGAACAAATCAATGTACATTCAAGCACAAAACCAAACCGAAAATCTCGTGCTCCAAGACGTTTACCAAAAGCTCAAGCTATCCCTATGAAGGATATTACAGCTGAATCAACAGTTGAGCAGTTGTCCAAATCGACGGAAGACATCCCACATTCTTCTCTTGAAACCTTATCTGCTAGCAGCATGAATCTCTTAACGTCGCAACTCGTCCCATACCAGCTGCATTATTCCATTATCCCGGACCAAATAGAGTATTATGGTGCGAGTTCATCTACGACAGTGCCGCCAGCGCCGATCTATCAAACTCTACCATATACCTTAACATCAAGCGAACAAGCCGCTAAACCGCCAGATCAGATGAGTCTTGTGGCCCAAATTACGATCATCAACCCGGAAGATCTACCCGTGGCGCAGCTACATCAAGAGCCAGTACTAGTGGAAGCGTCGAAACCAGCAACGCCTGAACCAGTTGTGCTTCAATCACGTGAATCGACTGATTCAAGGGAGAATACCACTGATGCCGATCAAGCGTATGATGAAGTGCATTCAGTTGATAGCAATCATAGCGACAACGTAAATGTGCTAGGACAAATTCCAGAAGCTGAGCAGGCGCAGGACGCTACGCAGGAATCAAAATTTACCAGTAAAGGGCAGGATGAATCAATTCTCACGGCGTTGCCATCTGAATCCACCACCGAGCTGGAATCTGACATCGAAAGTGATGTTTCTGTTGCTACCAGTGTGAACGATTTTGTCATCGAGGAGATTGATGAAGCAGTCAGCCAAAGTTCTTCGAAACACGGATCACCGAATCCTGAGCCGGAAAAACTAGAACCTGAATCAGCCAGCCTCAGAACACAAACGCTTGCGGATGCAACTCGATGCAGTTCTCCTGAAACAGGATTAGCAGAGGCAGATTCTGACTCGAAGGTCAAAAAAACGCACGGTTTGTGCAATTCCAGCGTTTCCGGTAGTGCAAATGAGGGTACAGTTCCTGATAGCTCCGCCGTGGTATCCGTGGCGAGAGTGGATGCAAAGGAAAATGATCCTTGTGTGAGCGGACGTAATACTTCGTCAATCACACCGATTTACAGTAATAATTTGGAGTTGGATATAAAGGTAATACATGCTCCCAAAAAGACGTACAATCGATCTTCCAAACGGAGGAACGCTCCAGTAGAGGTTACTAAGCTTACTCCGCATGCCTGGCGTTGGATTCACTTGGAGAAGGCAACACCCAATGAAATAGAACTGCATCAGGATGTTTGGGAGCAATGCAATCCGGAGAGACTAAAATTCAATCCGAAGCCAAACATAGCAGATTCCCAACAGAAAAATGTGCAGGATTGCGATGATATAATTGTTATAGACGACGATGAAGTGCAAATAAAAGAAGAACCAGTGGAGTACGAAGATAAAGAAGATGCTTCCGTTGCAGATGAAACGGTTTCGGATAGAGGTAATGTAGATGAATCGTGCATCCAGCAGATTATACAGACCGCAAGTAATATCCTGCGAATGTCTAGAACATATAACATGATGTCTCCGGACAGTGGTCGCGCATTTCGAGAACATCCTCCGTCGTCACCGACAATGAAATCGGAGCCAGGTCAGACTTCTTCCCGAATTTTTGATGAACACACCAATTGCTATTACTTTGTTGATGAGATTCCCGAGGAAACGATGAAGGATGTGGAAGCGCCTATAATTGATATTCCTCAAATTAGTCACACTTCACACGATACCGGTCAGCAGTCCCTAGAGTTGACATTCCCAGGGAATCCTGATAATGATTATTCACAAAGTATATCGGCATTGCATGTTCAGCATGTTCAACAGTCCAATTTCAAACCATTGATGACATTTGGGAAGCAATCGAATAACAGTTTGGATCCTAGCAGCGGTGGAAAATTTGTCAAAGGTAGAGATTTTCAACGGCAGTGCACTACGGTAACCGAAAGGCAGCCAGAAACTACAAAAATAGCGAAACCGAAACGCCCCCCCAGGGAACAGCGTGTTGAGAATTCGGGAGGTGTCCAAAAAAAGGCCCTGACACTATTGGGTGCGCTTTACAAACAACCGCGCTTAACGCCGCCGTCTACCTCCGTCATAGATATGAAACCGTTGCCGAGCGCAACGTCAGTTACGGAACACAAATCGGAATCTCGAAAGAGGCTGCAATCGCCAGAGCTTTCCCTTTGTGGTCGAGACTCGAAAAGAAGCAAATTGTGCGATGAAGATGATTTTCAGTTGGGTGATGGAAAGGAGGAGCAATATAGCGGATTTCTGGAACAATTAGATGAGTCGTGTGATGCGGTAGACATTATAAGCTTTTTAAGCAGCATGCGACAAAATAGCGCTTCACAAGTTTGCGAGGATGATGACAGTGGAGATGAAAGTTGTAACGCACGCCAAGCAGTCGGTTGTAATGCCCCGAAATCGTATCATCGAAACGATCAATCGAAGCATCCACTGATCGTCCAAAAAAAGATCTCTAGTCCTGTTTCAAGCACTGTCACTCAGCAGAAAGTACAAACTATTGTACAAAGTACAACGGGCCATTCAGCTATGGACGTTGAGTTCAAGGTAGCTGGAGTGACGATAAAAAAGGTGCGAAGGAAATAG
Protein Sequence
MSEFNSDSESCPSYLTESESEHESVWGEEKEQKEVDYTATAKDIICENVNITTENALNLNSGYHNMLKALKNKLEILLVQCQERQGEIEKQISEYRSTKKPLVGKSRTSGYICGQPYFKDEDLYPGPHNDDYLYRKNVRKEFFPLDMFEVTDTNWTIKDKVNILKGVKTQIIEFISVENRLKIKKIGNGLEAERLRREIVSLKGKEIGVLWEKVELFPKEYPSQKFEIDWMRISNVNISGRHSVAACIGIWNNYMIPGLVRSSWNHNEEKQLLAATEKYHRQNWIEIAKEVPGRSPYQCFVHYQTTFSDLAQIKHERWTEEEDELLVKLVDENRIGSNIVWNKVVEKMPLRNKIQCYNRYMFTLMRPTKNTKFTPEEDCIITAYVQECGDEFRFIPPNLLPGRTNRQIWARYNHTLKYVNKHSGWTIEEDYRLINFIRENLTEEGPRKISWAACSKALGNHSRLSCRTRYYTIEKFLEKNPDATLDDVPRKEKRLSTKVNNENWKKTMVDIQTESTSREAEDQELPSTSSAPKKERKVRKKRDPLFKNRHFSDTIKCLFRKRFFAKFKHSFHYKFGDQFPPKENLKIYCINKAIFHLLHCTTSFERVNDYSELFTIDEIKFIRASLSMRLNPGLINYLQSARYCFLFPPNYNTILGLRGIVLSATYPEEAMTEETNETLVPNETDYQYALENFRNRFRMVFFWTMLLVKQNPNDADLHKSENWVKTNEELEKQISLQQLSKLHNSARLRPLEGCEKDVQIETKHVQVASKTGISEEAEQINVHSSTKPNRKSRAPRRLPKAQAIPMKDITAESTVEQLSKSTEDIPHSSLETLSASSMNLLTSQLVPYQLHYSIIPDQIEYYGASSSTTVPPAPIYQTLPYTLTSSEQAAKPPDQMSLVAQITIINPEDLPVAQLHQEPVLVEASKPATPEPVVLQSRESTDSRENTTDADQAYDEVHSVDSNHSDNVNVLGQIPEAEQAQDATQESKFTSKGQDESILTALPSESTTELESDIESDVSVATSVNDFVIEEIDEAVSQSSSKHGSPNPEPEKLEPESASLRTQTLADATRCSSPETGLAEADSDSKVKKTHGLCNSSVSGSANEGTVPDSSAVVSVARVDAKENDPCVSGRNTSSITPIYSNNLELDIKVIHAPKKTYNRSSKRRNAPVEVTKLTPHAWRWIHLEKATPNEIELHQDVWEQCNPERLKFNPKPNIADSQQKNVQDCDDIIVIDDDEVQIKEEPVEYEDKEDASVADETVSDRGNVDESCIQQIIQTASNILRMSRTYNMMSPDSGRAFREHPPSSPTMKSEPGQTSSRIFDEHTNCYYFVDEIPEETMKDVEAPIIDIPQISHTSHDTGQQSLELTFPGNPDNDYSQSISALHVQHVQQSNFKPLMTFGKQSNNSLDPSSGGKFVKGRDFQRQCTTVTERQPETTKIAKPKRPPREQRVENSGGVQKKALTLLGALYKQPRLTPPSTSVIDMKPLPSATSVTEHKSESRKRLQSPELSLCGRDSKRSKLCDEDDFQLGDGKEEQYSGFLEQLDESCDAVDIISFLSSMRQNSASQVCEDDDSGDESCNARQAVGCNAPKSYHRNDQSKHPLIVQKKISSPVSSTVTQQKVQTIVQSTTGHSAMDVEFKVAGVTIKKVRRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-