Trut018396.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Toxorhynchites rutilus
Gene Symbol
slc16a12
Assembly
GCA_029784135.1
Location
CM056648.1:105832442-105848833[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.2e-08 5.7e-05 24.4 0.3 2 42 16 55 15 58 0.91

Sequence Information

Coding Sequence
ATGGCTCGAAAATATATCCGGAAAACCACTCGGCGATCTTGGACGGCAGAGGATTTATCTAAAGCGGTAAGCGCAGTGAAACGAGGGTTTTCTAGAAGATATGCTTCGAAGGCGTATCAGATTCCTCGTAGAACACTGTCACGATACATCAAAGCTAGCGGATCAAAGTTACAGCTTCCGCCTCATGGAAGTTTTTCTCCTGTTTTTGATAGCGCTCAGGAACAAGAACTTGTTGAACATATTGTGGAAGTGAGCAGAATCGGATGCGGACTGACCCGTTATGACATCAGAAATATTGCCTACCAGCAGGCCGAGCGAAAGCGTATTAAGCATCCTTTTTGTCATAAAACTGAGCTGGCTGGACGCGATTGGCTTTATCATTTCTTGAAACGACATCCGGAATTGTCAGTTCGGAAGCCAGAGCCAACATCCATAGCTCGTCTGAAATGTTTCAACAGAGTCAGTGTAaatgattttttcgatcttcttCGGAATGTCCATGAGAACAATGAATTTCCTCCGAGCAGAATTTGGAACGCTGATGAAACGGGATTTAGTACGGTTCCTACCAGGGGTATAAAAGTGTTGGCTGAAAAAGGTGTACGGCAGGTTCCTGGAAAATCATCCGGTGAGAAAAGTGTTACCACTACTGCTATAATGGCTATGTCAGCGAGTGGACAGTTTCTTCCTCCGATGCTTATATTTCCCCGTCAGCGTTTGAATGAGGCACTGAAGATGGGAGCTCCTCCGGAATCAATTTTTGCATGCAATGAAAGCGGATGGAGTACATCAAAAACGTGTTCTAAATGGGCGAAAAAAGATGAAACTTATATAGTTGATTCAACGATCACTGATAAAGAGTCATTTTTGGAGCTCACCGATATTCCAATGTACGACCCGGAAGTGCTTCTGTTGGATCCAACCATCTACTACAGTGTGACCGACAATGGAACAGTCTTGACCCATAGGATAACCTCAGCGAGTCATACTGCAGCTGGCGAAACACCAATACATGATCCGTTGTGTATGTGTATTGCATCGCAGGTCTGTCTCGATAAACCTGTCAGACCTCAGAGCCTCATATCTGATGATATTGAGATACAGCCAAAGTATGAGAACAAGTTCCTCCACGTTGTGTACCATCCCTCGATTCCTGATCACTGCCGGGCACCACTTAATGCGGCTCTGCTGGCAGAATGCGATAACAGTGGCTCTCTGTTCTCAATTCAGTCAGCCCCGGTGGTTGCCACGGTTAGCGGCGGCGTCGGTGGTCCCGAACCAGGTGCCACATCTATCCCCGATCCAATCGGGATGGAAACGATTCTGGATAGGCAGCGAGATTCGTATCCAGGAGCGGCCGGCGTGGACACGATCATTAACTCGTTCCATTCCGCTACTGATGCCAGAGACGAGCGAAAAGATACCTTGCTACGGCCATCATCTTTGGCGTTCGACACGTACTACCACGCAAGTAAACCAAACAACGTTGATACCCAGCTTTCTGCTGAATTGGATGAAGATGACAACGAGAATCTGTTGACTGTTTCCAGTCTTACTGCAAGGCCGTTGATTGCGAAATCCCGAGAGATTAATAAAAGCAAGAAGGAGAAGCTTCAACTGAGAAGGAGAAAGAAGGTATGCATTGCAACGAGCAGCGACGACGATGACGAGGGGCCGCCAGATGGTGGTTACGGATGGATTATTGTATTCGGAGCCTTTTCGGTGCAATTTTGGGTAGCTGGATTGGTCAAATCATACGGCGTGCTGTATGTGGAAATCATGGAGAATTTCCCTAACTCCTCGGCAACCACGGCCTCGTGGATACCAGCTATCTTGTCCGCTTTATGCTTAGCTTTAGCTCCGGTGTCTAGTGCTCTATGTCAACGTTTCTCTTGTCGTATCGTCGTTATCATTGGTGGTATCTTCTGTGGATTGGGGCTCACACTGAGCTACTTTGCTACCAGTCTAATCCACTTGCTATTTACCTTCGGTATACTGACTGGTATTGGAGGAGGATTATCAACCACCCCGGGGATTGTCATCGTGTCCCAGTACTTTGAAAAGCGACGAGCACTGGCGAATGGGATCACTATTTCCGGAACGGCGGCCGGCAGCTTTATATTCCCCACGCTAATCGAACGATTGATACACTCGTTTGGGTTTCATGGCACAATACTTATTCTCGGTGGTTGTATGCTGCATGTTTGCGTGTCCGGGGCACTTTATCGACCACTGGAAGACACCACTCATAAAAAGACCGTTCAATCTAGGGAAAGCGCACCGTTCGCCTCCAGGATGGACTTCAAGGAAAATTTGGGCCATCTCAGTTCGTCGGAAGATCACCTTAGCCGGCGCTGTTTGGAGGATCTATTCCTTGACGAGGCACTGCGAGACAAGAACCGTAACAGTCTCAATCTTGACAACAAGTTTGGTAAGCTTGAGAAGTTCCAGCAATAG
Protein Sequence
MARKYIRKTTRRSWTAEDLSKAVSAVKRGFSRRYASKAYQIPRRTLSRYIKASGSKLQLPPHGSFSPVFDSAQEQELVEHIVEVSRIGCGLTRYDIRNIAYQQAERKRIKHPFCHKTELAGRDWLYHFLKRHPELSVRKPEPTSIARLKCFNRVSVNDFFDLLRNVHENNEFPPSRIWNADETGFSTVPTRGIKVLAEKGVRQVPGKSSGEKSVTTTAIMAMSASGQFLPPMLIFPRQRLNEALKMGAPPESIFACNESGWSTSKTCSKWAKKDETYIVDSTITDKESFLELTDIPMYDPEVLLLDPTIYYSVTDNGTVLTHRITSASHTAAGETPIHDPLCMCIASQVCLDKPVRPQSLISDDIEIQPKYENKFLHVVYHPSIPDHCRAPLNAALLAECDNSGSLFSIQSAPVVATVSGGVGGPEPGATSIPDPIGMETILDRQRDSYPGAAGVDTIINSFHSATDARDERKDTLLRPSSLAFDTYYHASKPNNVDTQLSAELDEDDNENLLTVSSLTARPLIAKSREINKSKKEKLQLRRRKKVCIATSSDDDDEGPPDGGYGWIIVFGAFSVQFWVAGLVKSYGVLYVEIMENFPNSSATTASWIPAILSALCLALAPVSSALCQRFSCRIVVIIGGIFCGLGLTLSYFATSLIHLLFTFGILTGIGGGLSTTPGIVIVSQYFEKRRALANGITISGTAAGSFIFPTLIERLIHSFGFHGTILILGGCMLHVCVSGALYRPLEDTTHKKTVQSRESAPFASRMDFKENLGHLSSSEDHLSRRCLEDLFLDEALRDKNRNSLNLDNKFGKLEKFQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-