Trut040222.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056649.1:149260792-149261121[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-09 1.1e-06 29.9 0.0 2 43 16 57 15 59 0.91
Sequence Information
- Coding Sequence
- atgcctcgctgctaccaaaggaaaacgaatcgaggatgttggtcccaggagaacctcacccttgcaaaagaggctatTGCTAGTGGAGTTTCTATCAAACGTGCTTTCACGACTTTTGGAATACCCAGGTCTTCATTACATGATCAAGTTTTTCAGAAGGTGGTAAGCGCGAAACTAGGACCAAGAAAGACCATATTTACGGTGGAACAGGAAGCGGAGATCATGCAGCACCTACTTGACCTAGAAAACCAATTTTATGGCATCACGAAGATTGACGTACGGAAGCTAGCTTTCGAGCTTGCTGAAAGAAATGGAATCGCTTGTTCGTAA
- Protein Sequence
- MPRCYQRKTNRGCWSQENLTLAKEAIASGVSIKRAFTTFGIPRSSLHDQVFQKVVSAKLGPRKTIFTVEQEAEIMQHLLDLENQFYGITKIDVRKLAFELAERNGIACS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471297;
- 90% Identity
- iTF_01471329;
- 80% Identity
- -