Trut014020.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056648.1:22314060-22314542[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-10 1.7e-07 32.5 0.0 4 39 18 53 15 56 0.91 2 2 2.3 1.4e+03 0.7 0.1 15 25 109 118 107 118 0.83
Sequence Information
- Coding Sequence
- ATGGCTTGGACAAACGTGAAGAAAAGGTCAGCACCGGCATATTCTAAAGCTTCTTTAGATGCGGCCATTGACGCTGTAGAAGGTAAAAGAATGACAGTGTCCCAAACTGCACGATGCTATGAAATCCCTAGATTTACTCTACAAAAGAGATTTAACGGACAGAGAAGTATTTGCATTGAAACGATGGATAAATGGGGTTTTGGCTTAACCAAGACCGAGGTTCTACAGGCCATCGCACGGTATTTGACTGAAAACCATATTCCCAATACTGTCAAACATACTTTGCCCGGAGATGAATATTTTCTTCACTTCAAGAAACGTCACGGTTTATCTCAAAAGAAGGCTCAATCTATTGAGATTGCTCGAAAGAGAAATGTCGATCCATTTATAATGGCTAATTATTTTCAATTCCTAGAAGAAGTAACTCATGGAGTTCCTCCTGATCGAATCTACAATGTAGATGAATCTAGTTTCTGTTTGTAG
- Protein Sequence
- MAWTNVKKRSAPAYSKASLDAAIDAVEGKRMTVSQTARCYEIPRFTLQKRFNGQRSICIETMDKWGFGLTKTEVLQAIARYLTENHIPNTVKHTLPGDEYFLHFKKRHGLSQKKAQSIEIARKRNVDPFIMANYFQFLEEVTHGVPPDRIYNVDESSFCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471295;
- 90% Identity
- iTF_01471295;
- 80% Identity
- -