Trut008759.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056647.1:139304842-139305321[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-06 0.0062 17.9 0.1 4 37 18 50 15 54 0.91 2 2 1.1e-05 0.007 17.7 0.0 4 37 59 91 57 96 0.91
Sequence Information
- Coding Sequence
- ATGCCTACAAATTACAAGCGCAAGAGTAACCGGCAGTCATGGACCGCTCAGCAGTTAGAACAAGCCATTGAGACTGTAAAAAGTGGATCGCCGGTGAAGACAGCAGCAAGAAGTTACGCAATTCCAAGATCCACACTGATTCGCCACTTCACAAGTCCAACTGTATTAACTCAGCAGTTAGAACAAGCCATTGAGACTGTAAAAAGTGGATCGCCGGTGAAGACAGCAGCAAGAAGTTACGCAATTCCAAGATCCACACTGATTCGCCACTTCACAAGTCCAACTGTATTAACTCGGCTAGGACCTCTTGATTCCGTATTCAATTCTCAACAAGAAGAGGAGCTAGTGCAACATCTGTTGGATTTGGAAAAGAGGTTCTATGGAATAACGATGACTAATGTTCGAAAGCTTGCTTTTGATCTggccgaaaaaaatggattgccaAACCCGTTCAACAAGTTATTGGAAAAGCTTGGCTAA
- Protein Sequence
- MPTNYKRKSNRQSWTAQQLEQAIETVKSGSPVKTAARSYAIPRSTLIRHFTSPTVLTQQLEQAIETVKSGSPVKTAARSYAIPRSTLIRHFTSPTVLTRLGPLDSVFNSQQEEELVQHLLDLEKRFYGITMTNVRKLAFDLAEKNGLPNPFNKLLEKLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -