Trut025014.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056648.1:207299633-207301096[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-09 9.4e-07 30.1 0.0 4 38 274 309 273 314 0.93 2 3 0.053 33 5.9 0.0 23 35 341 353 326 358 0.88 3 3 8e-09 5e-06 27.8 0.0 5 36 383 415 380 420 0.88
Sequence Information
- Coding Sequence
- ATGAATCGTACAAATGTGTCCTGTGTGAAGTGGGTGGATTTCAGCGATCACATGTACACAACCTATTTGGAGGTGTTCGTGAATGCCCTGTACGCAGATGTTGCGCTAGTGCTGGCAGACGGAGGACTGCTCTCCGCTTCCCGGATGGTACTTTCGATGGCCTCCGAATTCTTCGAAGCTATTTTTCAAGCAGCATGCAGCACCAACTCTATGAGTCTCGTAGGAGCGCAGGAATTTAAGCTTCTGATTCCCGATGTTAGTAGCGGGATTATGAAGCATGTTCTGCATTTTATCTACACCGGGGAAGTACATCTAAACGCGCGGGATATGTCGGACTTCTTCGATGCCTGCCAGCTGTTTCGTCTGAAAGGACTGGACTATCAGAATGGAAATATCAATGGCATTAAAATCAGTGGTTCCAATATAATACCAGAATACGAATATGAAGAACTGCAAGAGACATACTTGGAAGAAACGCCCCCAAAACTCTTAGAGGAACCCATTAGAGATGCAGAAGAACCCACACAGTTTGTGGAAGCCCCAGATGAAAAAAACATCCACACAATGGACAAACATGTTAATGTTGCTGGTGCAGAACGATTTTCCCAGGAATACGAGgtggaaatggaaatggaagatTTGGATGTGAGCAGTAACGGCGGTAAGCAGCAGGAAATCCCAAGTCTTGAAACCCTAGTAGTCAATAGCGAGGAGCTATTTTCATCTAACCAATCAAATCTATCAGACACCGAGGCGAATCTAAATGAAAGCAGCGAATCAACATCGAAAAAACGAGTGAAAAATTGTGAGTACGGCAATCGTTTGGAAGAAGCGATCAACACTATCATTCAAGGTGGAGCAAGTTTTCGAACAGCGTCGATCCAGTACGGCATCCCAAAAACTGTGCTATGGAGGAAAGCTGTGAAGGCACCCAATTACAAAGCCGAGAGATGTGAATTGCCCTCGCCACGCAGAGAAGCAATTGAAGCTCTGAAATCCGGCGAAAAAATGCTTAACATTAGCAAACGATTCGACATTCCTTTGTCAACACTGCATCGGGACAAAATAAAACTGTACAGCGAGGGAGCTCTTCCTGAGAATGTTTCACTGAAACAACGGGACAAAGGATCTGACTTCAAGGACCGCGTTCTAGAGGCTGCGCGACACTGTGTGGCGGGAATAATGTCCCAATCGGAGGCAGCAAAATACTTCAAATTGCCTAAAACTACCATCTGGAGAAAGATAAAAGCATTGCGAGCGGAAGGACGTATTGCACTGGATGCCAGCGGGTCTGGGGATGACTTACAGACGGAGGACCTTGCGGGAACATTAGAGGACATTGATGAGACAGCAATGTGCGACGAAGAACATCTTGATCCAGAATATGTAGCGTTAGtgtga
- Protein Sequence
- MNRTNVSCVKWVDFSDHMYTTYLEVFVNALYADVALVLADGGLLSASRMVLSMASEFFEAIFQAACSTNSMSLVGAQEFKLLIPDVSSGIMKHVLHFIYTGEVHLNARDMSDFFDACQLFRLKGLDYQNGNINGIKISGSNIIPEYEYEELQETYLEETPPKLLEEPIRDAEEPTQFVEAPDEKNIHTMDKHVNVAGAERFSQEYEVEMEMEDLDVSSNGGKQQEIPSLETLVVNSEELFSSNQSNLSDTEANLNESSESTSKKRVKNCEYGNRLEEAINTIIQGGASFRTASIQYGIPKTVLWRKAVKAPNYKAERCELPSPRREAIEALKSGEKMLNISKRFDIPLSTLHRDKIKLYSEGALPENVSLKQRDKGSDFKDRVLEAARHCVAGIMSQSEAAKYFKLPKTTIWRKIKALRAEGRIALDASGSGDDLQTEDLAGTLEDIDETAMCDEEHLDPEYVALV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471644;
- 90% Identity
- iTF_01471644;
- 80% Identity
- iTF_01471644;