Trut028427.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- retn
- Assembly
- GCA_029784135.1
- Location
- CM056648.1:269905272-269940392[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-16 7e-13 50.4 0.0 29 89 4 62 1 62 0.93 2 2 8.3 4.3e+04 -3.4 0.0 25 38 143 156 122 166 0.66
Sequence Information
- Coding Sequence
- ATGGCGAAGTCGGTGCTGGATCTGTTCGAACTGTACAAGCTGGTGATTGCCCGCGGAGGGCTGGTCGACGTGATCAACAAGAAGCTCTGGCAGGAAATTATCAAGGGATTGCACCTTCCCTCGAGCATCACGAGTGCGGCTTTCACGCTGAGGACACAGTATATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAATAGCTTAAGTACACCAGCCGAGCTGCAGGCTGCCATCGATGGGAACAGACGCGAGGGTCGTCGCTCTAGCTATGGACAATTCGATGCGCCATCGGTTCAACGTTCGCCCATACCGCAGGGCATTCAACAGATGTCCCCGCTGTCGCTGGTAACCCATGTCAACCAGCAGCAGCACCACCGGCTGCTGGGGGCACCGAACGTGGGCCAAATACCAAACATCCTGCCGGCGGAGTTCGAGCAGCGAATGCTCGATTACATCAAACTGTTCCACCCGAAGGAGATGAAGCGTGAGCAGAGCCCGGAACAGTTGACCCCTCGAGATGCGCTCAATGCGCTGGAGATGTCCCGGGTCGCTCTGTGGAACATGTACAACAACAACACGAGCCCACCGAACTCGATCAACACCAGTCCGCCAGAGTTGCAAAGGGAAGCGCTCAACCTTTCGGACTCTCCGCCCCATCACATCTCGGTCAAACGTGAGCGGGACCACCCGATGGACTTCACGGATCGCTCGATGGGACGCGATTTCCATAGTGGCATTCCACCGGCAAAACGCAGCAACAACAATACGATTGCTGCCGCTGCCCAGCAGctccaacagcagcaacagcaacaactgcATGGCCACGGTCGCTCGCTAACCCCACAGAAGCTAAACATGTCCTCGCACGATGAAGATGACGCCCGTTCGGACGGAACACCCATAAATCTCCGCGGCGATAATGGCATGCGTCACCACGATGAAGATATTCCGGATGACGAGGaagaggacgaggatgaggagaTGAATATGGCCGAAGACGCCCATCCTCTGGCGTTGAATAGAATCACAGAGCACGCGGCGGCATTGGCCGCGGCACAGAGAGAGCGCGACCAGGTGCAGGTGAATCATCTGGCCAGTTTGAATTTGAGTCTGCTGGAACGCGAACGTGAACGATGCGAAGATGCCGACAAGCTCAAGcgtcaacagcagcagcagttgcAGCTGGAGCAACTTCAGAGGGAACAACTGCTGCATCATCAGCAGCAGTTGCAGCTCCTGGAAAGAGAACGGGAGCGTGAACTACAGCGGGAACATGAACGGGAAATacagaagcagcagcagcagcagcaacaacaacagcaagaaCAGCAACACATTTCGGAACAGAACCGCCAAAATGGAGATCGTTTGAGTGGAGCAGCCAGGACAGATAACCACATCGGTACCATCGACAGCGACCGTCAAAACTGCTCTCGCTCAGCGAATGGCTCGACGAGTCCAGGTTTGGGTGCCACCGGAACGACCATGGGCATCATGGGAATGCAGTTTAAGTTGACCAGCAGAGGTGATGCTGCCAAAGGCGACCAACAGTTAGTGGTATCGATGGAGTTCAACGGCGTACAGTACGAAGGCGTCCTATTCGCCAATCCCTCGTCGACTTCTCTAAACTCCTCATCCTCGCAAACGACGAAAGCTTGCAAAAGCATCACAAACATCACATCCAGCAGCAGCAACGCGCGGGCCGAGAATTCCGCTTCCTGTCCGCTCCTGGTGACAGCAGCCAACAGTTCTGCAGTCGCACCGTCTTCATCCTCCCCGGCCGGTAGTATtcatagcagcagcagcaacaacagcgcCTCGCCCACCGGCTCGCTGATTATCTCGCCGGCCAAGACCAATTCCTCCTCGCTGGGTGGTGACGAACCCATGGCGACCGGTCTTTCCGCTCCACCCCAAGTTATCACCCCAAGGCCACCACTAGTTTCCTAA
- Protein Sequence
- MAKSVLDLFELYKLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKNSLSTPAELQAAIDGNRREGRRSSYGQFDAPSVQRSPIPQGIQQMSPLSLVTHVNQQQHHRLLGAPNVGQIPNILPAEFEQRMLDYIKLFHPKEMKREQSPEQLTPRDALNALEMSRVALWNMYNNNTSPPNSINTSPPELQREALNLSDSPPHHISVKRERDHPMDFTDRSMGRDFHSGIPPAKRSNNNTIAAAAQQLQQQQQQQLHGHGRSLTPQKLNMSSHDEDDARSDGTPINLRGDNGMRHHDEDIPDDEEEDEDEEMNMAEDAHPLALNRITEHAAALAAAQRERDQVQVNHLASLNLSLLERERERCEDADKLKRQQQQQLQLEQLQREQLLHHQQQLQLLERERERELQREHEREIQKQQQQQQQQQQEQQHISEQNRQNGDRLSGAARTDNHIGTIDSDRQNCSRSANGSTSPGLGATGTTMGIMGMQFKLTSRGDAAKGDQQLVVSMEFNGVQYEGVLFANPSSTSLNSSSSQTTKACKSITNITSSSSNARAENSASCPLLVTAANSSAVAPSSSSPAGSIHSSSSNNSASPTGSLIISPAKTNSSSLGGDEPMATGLSAPPQVITPRPPLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -