Basic Information

Gene Symbol
Xbp1
Assembly
GCA_029784135.1
Location
CM056648.1:4313098-4314615[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.4e-14 1.7e-10 42.4 11.8 2 62 60 120 60 123 0.94
2 2 0.6 1.4e+03 1.0 0.6 27 51 113 137 111 148 0.77

Sequence Information

Coding Sequence
ATGAGTACCCCAATCGTGATAAACGTTCCAACGAAATACATCCCGATCCATTTGGCCCCCGTTAAAACGGAAATCAAACCGGTGATCTTCGGTTCGGACGACGCTGACGAATCAACCTCCTCGATGGATGAATTCCTTGTGCGGGGCAAGAAACGCCGTCTGGACCATCTAACATGGGAGGAAAAACTCCAGCGGAAGAAATTGAAAAATCGCGTCGCGGCACAGACATCCCGTGATCGCAAGAAGGCAAAAATGGAAGACATGGAACAAACCGTCCAAAACCAAGCGGAACAAATCAGCGAACTCAAGAGTAAGTGTGATTTGTTGCAGGCGGAAAAAGAGGCTATCCACAGCAAGTATCTCGATCTTGAGAGTCGTTTCGAAGAGCTGAAGCGACGCCTCGACGAGCAACAGCAAAACCAATCCCAGCAGCCACAAACAACAAGCGCCGTCACGATCAAGATCAGCAGCATCCGCCCAAACCCCTCAGCAGCAGGGACCTTATTCAATGGAAACACAGACGACACTGCGTCAGGAACAGGACAGCGAGAAGTTGGCGGCTCTGTGGAAGATAATTGCTCTTTGCCTGCTCTACAGGACATGCTCGAAGAGTTCGACGTGTCCAAACTCGAAGAGCTCGCCGAAAGCTTGCTGGCCGACGTCACAAGTGAGCTGGAAGGCACTGATCGAGGAAGCCTCCCGACAGATGCCCAAGATGCAGGCCCCGGCGGCCGAATGCTTGGACCAGTGGTGGGGACCTCATCAGAACGGCTGGAACCCGGCCAAGAAACTGATCAAGGAAGCAGCCTAATTCTGAACACCCACAATTATTCCAAATCACCCTTTCACGTAGAAACACCACTATCTGGAGAGAATCAGCAGTCTGGGTTAAACCAGCAGACAACGGTCTTCGGATCCTACGACGACGCAACGAATTGCATCACAATTGTGTTGAACGATGATGAAATTTCTCTGGAAGAAGAAGTCATCTGTGAAGAGTCCGAAGAGGAAATGGTGCACGAAGCAGAGTTCGAAATAAAATTGGAACCAGTGCGGGAACTGCTTTCACCAATTCCGAGCACCTGTTCCAATTACTCTTCGGCGCCAAGCGACTGCAGTCGAATGCATGTGGATGAGGAACCACAAAAAGTGCAAAAGATCCCTCCCTCGCCACAATCGTTCATTTCCGATGGGGGATACGAATCGTTAAGTTCTCCCACTTACTCCACGGATTTCAACATGAGTGCGCTGGACGACTTCTGGAATTTGGATCTGTTTCCCATCTTGAGCTGA
Protein Sequence
MSTPIVINVPTKYIPIHLAPVKTEIKPVIFGSDDADESTSSMDEFLVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKMEDMEQTVQNQAEQISELKSKCDLLQAEKEAIHSKYLDLESRFEELKRRLDEQQQNQSQQPQTTSAVTIKISSIRPNPSAAGTLFNGNTDDTASGTGQREVGGSVEDNCSLPALQDMLEEFDVSKLEELAESLLADVTSELEGTDRGSLPTDAQDAGPGGRMLGPVVGTSSERLEPGQETDQGSSLILNTHNYSKSPFHVETPLSGENQQSGLNQQTTVFGSYDDATNCITIVLNDDEISLEEEVICEESEEEMVHEAEFEIKLEPVRELLSPIPSTCSNYSSAPSDCSRMHVDEEPQKVQKIPPSPQSFISDGGYESLSSPTYSTDFNMSALDDFWNLDLFPILS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-