Tmul009396.1
Basic Information
- Insect
- Toxonevra muliebris
- Gene Symbol
- su(Hw)
- Assembly
- GCA_963691655.1
- Location
- OY829327.1:8691800-8695989[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.006 0.48 11.6 1.8 1 20 132 151 132 152 0.95 2 12 9.7e-06 0.00078 20.4 0.3 3 23 204 225 202 225 0.93 3 12 0.056 4.5 8.6 0.2 1 23 231 253 231 253 0.95 4 12 8.9e-07 7.1e-05 23.7 2.5 1 21 260 280 260 281 0.95 5 12 2.5e-05 0.002 19.1 1.1 3 23 294 314 292 314 0.96 6 12 5.3e-05 0.0043 18.1 2.2 1 23 325 347 325 347 0.98 7 12 2e-05 0.0016 19.4 0.8 1 23 353 375 353 375 0.97 8 12 8.2e-06 0.00065 20.6 0.7 1 23 381 403 381 403 0.99 9 12 2e-07 1.6e-05 25.7 1.6 1 23 409 431 409 431 0.98 10 12 5.4e-06 0.00043 21.2 1.6 1 23 435 457 435 457 0.98 11 12 8.5e-05 0.0068 17.4 0.7 1 21 470 490 470 494 0.93 12 12 0.11 9 7.6 0.3 3 23 509 530 507 530 0.94
Sequence Information
- Coding Sequence
- ATGATTAAACAGGAGAATAAACGCTCTTCCACTAGAGGAACCGCTGGTgctaatagtataaaaatacttaatgaTGAACAGTTGGCTGTGGCGGTGGTGACAGTGCCAATAATGACTTCTGTTCCATTGTCGCCTACTAAACATGTCAGCTTGTCAATTGCTAAGAGCAAAAAACCTTTAGCCAAAAAGAACATGGATCATTATGTGCTGAAGAACATCAAGGCagaaacaaataatgaaaacgaGGCAATTGATTTTATACTTGCGGATAGTCACGGCAATGAACAGCAGAACGGTGGACTCAGTGGTCCAAGTGGTGAAATCACCGAAGAGCTGCATCTGAGCGGTGATGAAGAGACCGAGGGCGAAGAAAAGACGGAAGAAATAGTGGAGCATGTCTGCGGCAGATGTTATAAAACCTTCAGGCGCTTTAATGGTCTTAAAAAGCATTTGGACTTTTGTCGTTTCGATAGCGGTTATCATTTGCGAAAGgcagaaatgttgaaaaatctgGAAAAGATTGAGAAGGATGCAGTTATCATGGAGAACAAAGATGTTTGTTTCTGTTGTGGCGAGAGTTATGATACATTTCATCTTGGACATATAAACTGCCCCGATTGTCCAAAATCTTTCAAATCTCAAATGAGCTATGAGCGTCATATTTTCATAACTCACTCTGAATTCAATGATTATCCATGCAACATTTGCAATGCAAAGATGAGAAGTCAGAATCTATTGAAATTGCATGTGGATCAGCATCGAAATCGTGGTAAACCATTTGCATGCAAAATATGTGGTAAAGATTTTACGCGTTCATATCATTTGAAACGTCATCAAAAGTATTCAATGTGCTCGCAAGATTATACGGATGCAATGAATTGTAAAGTATGCAATAAGATATTTTTTCGTTTGGATAATTTACGGGCTCACTTGAAGCAGCACTTGGGCACTGCGACAGCAAAGAAGCCGGAATATATGTGCCCTATATGCAAGAATTGCTTTTACAGTTTGTCTACATTGAACATTCATACACGTGTGCATACAGGAGAGCGTCCGTTCGATTGCGATTTATGCGATAAGAAATTTCCATCATTGGTTGCATTAAAGAAACATCGTCGCTATCATACCGGCGAAAAGCCGTACACATGCTCAGTgtgCAATCAATCGTTCGCTGTGAAAGAAGTGTTGAATCGTCATATGAAGCGTCATACTGGTGAGCGTCCTCACGTTTGTAAGGAATGTGGCAAGAGTTTTATACAAGCTACACAGCTAAAAAGTCACGTGAGGACACATATCAAACCTTACGAATGCGATGAATGCAATGagaaatttaaaactgaaaaacaATTGGAGCGTCATTCAAAGACACACAATCGTAAGCACATTAGACGTCAGAAGAATTGTGAATTCAAATGCGACATATGCACGGCTTCATTTAAGTTACAGGAGCAACTCAATAAGCATATGGAATTCGGACAACATATAGTTTACAAAGAAACAAGAAAGCGCAAGAATCGCACTGACTGTGCAATatgtgagaaaaatttcgatACTGTTAAATCGCTGCAGTTTCATATACTTAAAGTGCACGAAGTTGATCCAGAAGATTTTATCAATGAAAAACCCAATCTTAGCATTGAGGATAacgtagaagaagaagaaaaatcatcTGCTGCTAAGCgtccaaaaatttataaaatcgaaGAGAATCCGTTAAATCAAATTGAATACATTACAAGCACACAACGGAATATTTTGCCAATCACCTATAGcctcaacaaaaaattaatcgaTGGGAATGATATTGAAGTAGTAGGAAGCAGTAGTGGTGTTGATGCTGATGGCTGTGGTGATGGTGTAGGCGTACTCGTACATGAATTTATCGTTGATGAAATGCCGTCTACAAGCACCAAGCAaacaataaatatgcaaaatgaatCATTCACGGTTATACCATTGCATTCAGATGGTGGCATCATTGAGCCAGTAACTACAAATACAATGCCTATGCAAATTTCTTCACCAGAAACTACTACACAGAAAATATCACCAAGAAAAACATTAGCAGAAAGCTTAGCTGCAGCTATTGCTGACGATGATGAAGCAGAAGTGGAtgaagaaattgaagaaaaatacaaCAGAAATCTTGAAGCGCATAGCGAAGAGGACTTAAAGTTAAAGGAAAATGTAGGGAAGTTACTTGATATGCTAGTGGATAATGCAACATTAAAGAAATTTGGTTGGCCAAATGCTACAGAAGAAGATgTACTCTGCAAAGTCATTGAAAACTGTGGTCACGATTCATCTAAAGATTCAGATAATTACAGAGAATGCGACTACGCTACACGTATGCgcgaatatgtaaaattattattcaccGTAGTCATACACAATGATTCGATCAAGGAATTGCTTAATAATTATCCAATCGATGAAGTTATTGAATATGTTTTGGGTAACGATGAAGACGATGATGAAGAGGAAGAGGAGGAGAACGatgacaataaataa
- Protein Sequence
- MIKQENKRSSTRGTAGANSIKILNDEQLAVAVVTVPIMTSVPLSPTKHVSLSIAKSKKPLAKKNMDHYVLKNIKAETNNENEAIDFILADSHGNEQQNGGLSGPSGEITEELHLSGDEETEGEEKTEEIVEHVCGRCYKTFRRFNGLKKHLDFCRFDSGYHLRKAEMLKNLEKIEKDAVIMENKDVCFCCGESYDTFHLGHINCPDCPKSFKSQMSYERHIFITHSEFNDYPCNICNAKMRSQNLLKLHVDQHRNRGKPFACKICGKDFTRSYHLKRHQKYSMCSQDYTDAMNCKVCNKIFFRLDNLRAHLKQHLGTATAKKPEYMCPICKNCFYSLSTLNIHTRVHTGERPFDCDLCDKKFPSLVALKKHRRYHTGEKPYTCSVCNQSFAVKEVLNRHMKRHTGERPHVCKECGKSFIQATQLKSHVRTHIKPYECDECNEKFKTEKQLERHSKTHNRKHIRRQKNCEFKCDICTASFKLQEQLNKHMEFGQHIVYKETRKRKNRTDCAICEKNFDTVKSLQFHILKVHEVDPEDFINEKPNLSIEDNVEEEEKSSAAKRPKIYKIEENPLNQIEYITSTQRNILPITYSLNKKLIDGNDIEVVGSSSGVDADGCGDGVGVLVHEFIVDEMPSTSTKQTINMQNESFTVIPLHSDGGIIEPVTTNTMPMQISSPETTTQKISPRKTLAESLAAAIADDDEAEVDEEIEEKYNRNLEAHSEEDLKLKENVGKLLDMLVDNATLKKFGWPNATEEDVLCKVIENCGHDSSKDSDNYRECDYATRMREYVKLLFTVVIHNDSIKELLNNYPIDEVIEYVLGNDEDDDEEEEEENDDNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01133076;
- 90% Identity
- -
- 80% Identity
- -