Tmul005348.1
Basic Information
- Insect
- Toxonevra muliebris
- Gene Symbol
- -
- Assembly
- GCA_963691655.1
- Location
- OY829326.1:95871233-95886954[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.057 4.6 8.5 1.0 2 23 35 57 34 57 0.91 2 15 0.043 3.4 8.9 1.3 1 23 419 441 419 441 0.95 3 15 0.0038 0.3 12.3 0.7 1 23 447 469 447 469 0.98 4 15 0.0025 0.2 12.8 1.4 2 21 476 495 475 497 0.94 5 15 2.8e-07 2.2e-05 25.3 3.1 1 23 503 525 503 525 0.98 6 15 0.001 0.082 14.0 1.9 1 23 531 553 531 553 0.96 7 15 5.7e-06 0.00045 21.1 0.5 2 23 560 581 559 581 0.97 8 15 5.8e-06 0.00046 21.1 0.5 1 23 587 609 587 609 0.98 9 15 0.043 3.4 8.9 1.3 1 23 748 770 748 770 0.95 10 15 0.001 0.083 14.0 1.2 1 23 776 798 776 798 0.98 11 15 0.0037 0.29 12.3 1.4 2 21 805 824 804 826 0.94 12 15 1.9e-06 0.00015 22.6 0.7 1 23 832 854 832 854 0.97 13 15 0.0018 0.14 13.3 2.0 2 23 862 883 861 883 0.92 14 15 2.5e-05 0.002 19.1 1.5 2 23 890 911 889 911 0.96 15 15 2e-05 0.0016 19.4 0.5 1 23 917 939 917 939 0.98
Sequence Information
- Coding Sequence
- ATGGATTTACACGGCGATGTTGCAACATCAATAAATGAGAATTTTAGAAAATGCGGTGAGATTACTACAGCAATAAAAGTGGGGAAGAAAGTTTATGCTCTTAATTGTGGGTTTTGCTCAAAAGTCTTCATTAAATTACACGCATTCACATTGCACATTGATGAAAAACATGAACAAGAACTTTTTAGATGTTTGGAGGAGGATGATCGCTATGATGAGGTACTGCCAGTGGATGGAGGAAAAGTTATTCATGGAAAATGTAATGATGAAGAGGATACCGCATCTAtggaaattatattttctgatGAGATAAAGGAAGAAGAAACAGCAATTGATTTTCAAGATCTACTAGAACAGCCACCACTTAATGTTATAACTGAAGAAATATCTGATATTTTGGAACTTAAAGAAGAACTTGTAGTTTTACACGAAGACAATGAATGTGTTAACAATGagtatataagtacatatAATGATGTAGAAGATGAAATAAATTCCAGTGGCACAGCAATCAGTTCTGAAAGTGTTAACGAACCAAATGATCGTCAAGACTATGAAACACAAATAAACGCTAAAGAAATCACACGAGCTATTATAGCAGGCTTCGAGAAGCATAGCATTCTTTGGAATGCAAACGACCCAAGATCAAAAGACCGAAAAGAACTCATAGAAGCACATAAGAGTATCGCAAACTCCATAAATAAGCAAATGTTTACCAATTTAAAATGGAATCACATCAGCgatcgaataaaaaaattatgctacaAATTTCGTTTAGAgctacaaaatcaaaaaattgccaaGACAAAAGGTGAAGAATACAGTCCTATATGGTATTACGATCAACTTCTATTTCTAAATACGGCAACAAAAAACAGACGCAAAAAAgATGAAGTGAAATTGGAAAGTGAATCGCGAGAATACGAATTACCGTTGCCCACTCTCAcagattcaaaaaatttagaattaatagaaatttataaaagttttccttGTCTGTGGAATATGGAACACATTGAATTTCGTGTCACAAATCGACGTCAAGAGGCTACAAATGAGATGATACaggaaataagaacaaaaatggacTTAAATCTTACACAAGATGAACtgcaaaagaaaatcaattgcGTTCGTGATGCTTATTCGCATGAATCACATCGAAAGATAAAATGTGAACGCTTGAACAAAATATTCACACCGTTTTACAAATTCTACGAGAAGATATCATTTCTAGAAAATAACGTCAACCCATTCAAGTGCGATATTTGCGAGGAAACTTTTGATGGGTTCAGTagatataaaatacataaatcgcAACATGATGGTTCAATGCCTTTCACTTGTGCGCTCTGCAATCATGGCTTTATGGATGTATCGAACTATGCAGTGCATGTGAGACGGCATACAcgtgattatcctgtcgaatgCGAGGTATGCAAAAAGCGTTTCGCTATCAATGATGATGTAAAAAGACATATGCGCTGTCATACCGGAGAGAAaccatatttttgtgaaatttgtggTCAATCTTTTCGAACTTGTTCGTCGTTAAATGTTCATATGCGTCGGCATAAAAAGAAACCTAATCACAATTGCACCATTTGCTCTAAAGCTTTCTATGAAAAGTTCAGACTTACAGCTCACATGAACGCTCATTTAAATATACGCGACAAAGTATGCAATATCTGTGGTAAAGCATTTACGGCCCAAAAATATTTGCGGCAACATCAACAGATTCATGCAGAGAAAAGagaatttatttgtaagatttgCGGAAAAGATTTTGCCCAACGGGCTGGTCTACACGGACATATGAGGTCGCATGGAACCACTTTAGATGAAGAATCTGAAATTGATTTTCTGGATCCTCTGGAGGCTTCTTCAGTTAATGAAACATTTAAAGAAATACCCAACATTTTAGATGGTAATGAGGAAGAAGAAACGTGTATATATAAAGGCAGTGAATGCAACTACCAAAATTACGACGATAAGAACGACACAGACTTCAAACTAGATCCCAGTGAAACAGAAAACAGTTCTGAAAGTGATGAACAAGATTATCATGATGAAGACGATGATTCGAAAGAACTTACACTAGCTATTATCACAGCCTTTGAGAAGCATCACATTCTTTGGGACTCAAGTGAACCAATATCGAAAACTCGAAAGGAACGTATAGAAGCACATAAATTAATTGCAACCaaaattaatgaacaaatgGAGAATAATGTCAGCCCATTCAAGTGCGATATTTGCGAGGAAACTTTTGATGGGTTCAGTagatataaaatacataaatcgcAACATGATGGTTCAATGCCTTTCACTTGTGCGCTCTGCAAGCATGGCTTTATGGATGTATCGAACTATGCAGTACACATGAGACGACATACACATGACTATCCTATCGAATGCGAAGTATGCAAGAAACGTTTCGCTATAAATGATGATATTAAAAGACATATGCGTTGCCATACCGGAGAGAAaccatatttttgtgaaatttgtggTCAATCTTCTCGAACTTCTTCATCGTTAAATGTCCATATGCGTCAACATAGTAAGAAAACTCACAATCACAATTGTATTATTTGCTCGAAATCTTTCTATGAAAAATCCAGACTTAAAGCTCACATGAACGTTCACTTAAATATACGCGAGAAAGTATGCAATGTCTGTGGTAAAGCATTCACAGACACACATAAATTACGACAACATCAAGACATTCATGCtgagaaaaagaaatatgtttgTAGGATATGCGGAAAAGATTTTGCACAACGTGCTGGTCTACACGGGCATATGAAATCGCATGGAACCCCTGTGACTTCCATGAAACCCTAA
- Protein Sequence
- MDLHGDVATSINENFRKCGEITTAIKVGKKVYALNCGFCSKVFIKLHAFTLHIDEKHEQELFRCLEEDDRYDEVLPVDGGKVIHGKCNDEEDTASMEIIFSDEIKEEETAIDFQDLLEQPPLNVITEEISDILELKEELVVLHEDNECVNNEYISTYNDVEDEINSSGTAISSESVNEPNDRQDYETQINAKEITRAIIAGFEKHSILWNANDPRSKDRKELIEAHKSIANSINKQMFTNLKWNHISDRIKKLCYKFRLELQNQKIAKTKGEEYSPIWYYDQLLFLNTATKNRRKKDEVKLESESREYELPLPTLTDSKNLELIEIYKSFPCLWNMEHIEFRVTNRRQEATNEMIQEIRTKMDLNLTQDELQKKINCVRDAYSHESHRKIKCERLNKIFTPFYKFYEKISFLENNVNPFKCDICEETFDGFSRYKIHKSQHDGSMPFTCALCNHGFMDVSNYAVHVRRHTRDYPVECEVCKKRFAINDDVKRHMRCHTGEKPYFCEICGQSFRTCSSLNVHMRRHKKKPNHNCTICSKAFYEKFRLTAHMNAHLNIRDKVCNICGKAFTAQKYLRQHQQIHAEKREFICKICGKDFAQRAGLHGHMRSHGTTLDEESEIDFLDPLEASSVNETFKEIPNILDGNEEEETCIYKGSECNYQNYDDKNDTDFKLDPSETENSSESDEQDYHDEDDDSKELTLAIITAFEKHHILWDSSEPISKTRKERIEAHKLIATKINEQMENNVSPFKCDICEETFDGFSRYKIHKSQHDGSMPFTCALCKHGFMDVSNYAVHMRRHTHDYPIECEVCKKRFAINDDIKRHMRCHTGEKPYFCEICGQSSRTSSSLNVHMRQHSKKTHNHNCIICSKSFYEKSRLKAHMNVHLNIREKVCNVCGKAFTDTHKLRQHQDIHAEKKKYVCRICGKDFAQRAGLHGHMKSHGTPVTSMKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -