Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_963691655.1
Location
OY829327.1:38345415-38348273[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.8e-14 2.9e-11 43.5 0.0 1 45 20 65 20 65 0.96
2 3 3.5 5.8e+03 -2.2 0.9 3 20 338 355 337 359 0.82
3 3 1.4e-18 2.4e-15 56.6 0.0 1 43 521 564 521 566 0.95

Sequence Information

Coding Sequence
atgACCAGGGCGAAACCATCACGAGCTACACCAGTGCCCACAGGACGTCGTACCTATACAGATGATGATTTGAATAATGCCCTGCAAGATATAATAAGTGGTAAGCTAGGCACGCGCAGAGCATCAGATCAGTACAGTGTACCACGCTCTACACTTCGCAATAAAGTCAACAAGCTGACAATGAGAGCGAAACGAGCGAATGCCCAAACACCAGCGGACCTCCTGCAGCTGCAGCATGAACTCGAAATGGACAAGGATTTGTCCGGTGATGAGGGCGGTGGATGTGGTGATGATAGCAATGCATCAACGCCACAGCTCGATGTGCAGCCAGCGCTTGATGAACTTGCCAATCGTGTAATGGCTTCGACAACATTACGTAAATTATGCAATAACAATGACGGTGATGTTGGAAGTGATGGGGAGAACGAAATATCAAAGCCACATACAATGCAGTCAGATGCAAATAAGCGTAAAAGTAGCACGCTCTCGAGTAGTGCGCATCTGCAACCGCAAGCATCACCACAATTCGGGCCAATGCTGATTGATCCGAATGTGTTGTTGCAAAGAATGCTTATGGCTGCGGGTGGACTTGGAGATATTGGTGATATTGTGATGAAACTAACAAATGCTATAGCGGTTAGCGCAGTAGCAGCTGGCGGCGATAGCGCGCTCAACAATGGGCAACCAAATATGAATGACCAGCGATTGCTGTTGCAACAAGTGCAACAACACCAGCAAGCGTCCCAATTTTCACATCGTCTACCAAAGTCTGAAACGCCCGAGACCACATCTTCGCTGGATCCGAATGAGGCGTGTGAAGATCCGTCGACGATACTTAAAATTCCGTCCTATAAGCCCGTGGCAGGAACTTCAACCTCGACAGGCGCTGATGCAGGCTCCGCGCGTGCGTCCTGTTCGCCTTCGCTActatgtaacaacaacaatatcatcaATACAAAACCAAACCGCAATGGTGACAGTCCTCATTCGACGTCTTCGCCGCACATTGCCACCTCAATGCTAGCAGCGGTGGTTGCAGCGGCAGGAGGCAAAACCTCTTCATCTGCTGCGAATCGTCAAAGCAATAATATTTCCGTTATCTCACCGCCACTCATGCATCATCACAATTTTAGTGCGACAGATTCGCTATCACCGTCATTTTCATTGCGGGATGTCATGGCTAATAGTATACATCGCACAATGAATGAGCAAGCGAATCAAGAAGCGCACGCCGCCGCCGCTGACTCCATGCTTGTATTGGGCGCCGATGTAGATCGCAACGCCAGCAGCGGAGATTACAAGAAGCCCAGCATTTCGGTGGTGAAAAATATCGGTGGTACTGATACTTCTCGCTTTGGTGCTGCGCCGAATCTGCTAGCATCCgttggcggtggtggtggttcACACAATTCGCATCTCCACCATCAGCCACATCCACAGTTACAGCACGCCCATCATTCGCACCATCATCCCTCTGCGCATCACCTCAGTCGTCAAGAAGCGGCCGCGCTTGCTGCCGGCAAAGGTACACGTCCAAAGCGTGGAAAATATCGCAATTATGACCGCGATAGTCTTGTAGAAGCGGTGAGAGCCGTGCAACGTGGTGAAATGTCTGTACATCGTGCTGGCAGCTATTATGGCGTGCCACATTCTACCCTCGAGTACAAGGTAAAAGAACGACATCTTATGCGGCCACGCAAGCGTGAACCAAAACCACAGCCAGGGCTAGACGGTATCAGTAGTAGCAGTACGACGGCTTCGAAATCTAACTCAAACATTCCAGGTCTCAATAGCAtcgacaaaacaaaaataggtGCCACGGGTGCAAGTGCAAAGCTTAGTGGCGGgcacaagaacaacaacaataacaatagcgtCGCAACATTCCCCAACACCACGCCAAATGGCATGAAATTGCCTATATTCGATCCGACGCAGCTTCAGTACCCATCGCATCTCTTTTGGCAACACTCTCCCGCGGCAGCGGCTGCAGCGTTCGGTCAAATGCCAATAGATTTCAATCGCAATGCAGCAACTCAGGGCGGCATTGGCAACAACATTAACACAGATTTACTAAAGTCACGCATTCAACGCTACCAGGAAGAAGTAATACGCTCTGCAGGCGGAAGCGGCAGTTCTGGTGCTACAAATGCCAACAGCCCCAGCCCTATTTCTAGCCCGCTATCGGGACAAAATCATCACGCGCTCAATTTGAACGCCAATGGTTCCTCCTTCCTTGATGGCATCATACGCCAAACGCTTGATCGCAAAAGCGGTGAAGTGTTACCACCAGCCAGTGCTGGTGGAGCTCTACTTGATCAGTTACTAGTGAAAAAGACACCATTGCCCTTCACCAACAATCGAAGCAATGAGTATGCATCTTCATCTGCGGTTACAGCGGCAGCAGTCGCCAAGCGTTCAGGTAGTCCGCTTTCATATACGGAAATCAAACGAGAACGTACAAGTCCTATGCGCAGCagtgaagatgatgatgatgaatcaCAAAGCGGCGCTGAAGATGCAACACTCgagcacaacaacaataaaagtaacCTCAGCGGCAACGGTGGACTCAATATCAGTGAACATCAACGTCAACACCAGCACCAACAGCAACGCAGTCGCTTGACATCGCGCGATTCCGAAACCGATGCCAGTAGCGTCAAGAGTGAACGCATGCATGCGACGACGCATCATCAAAATCATAATAATACTAGCAAAATGGTGGATCTAAATGGCAGCAGCATCGCTGTGACGTCAAAAACAGAAATGCCTTTGGAATCGATGGGTAATACATCGATATTGCAAGAGAAATTGGCGCAAATCAAAGCAGAGCAAGAGAGCGAAGAGAATTTATag
Protein Sequence
MTRAKPSRATPVPTGRRTYTDDDLNNALQDIISGKLGTRRASDQYSVPRSTLRNKVNKLTMRAKRANAQTPADLLQLQHELEMDKDLSGDEGGGCGDDSNASTPQLDVQPALDELANRVMASTTLRKLCNNNDGDVGSDGENEISKPHTMQSDANKRKSSTLSSSAHLQPQASPQFGPMLIDPNVLLQRMLMAAGGLGDIGDIVMKLTNAIAVSAVAAGGDSALNNGQPNMNDQRLLLQQVQQHQQASQFSHRLPKSETPETTSSLDPNEACEDPSTILKIPSYKPVAGTSTSTGADAGSARASCSPSLLCNNNNIINTKPNRNGDSPHSTSSPHIATSMLAAVVAAAGGKTSSSAANRQSNNISVISPPLMHHHNFSATDSLSPSFSLRDVMANSIHRTMNEQANQEAHAAAADSMLVLGADVDRNASSGDYKKPSISVVKNIGGTDTSRFGAAPNLLASVGGGGGSHNSHLHHQPHPQLQHAHHSHHHPSAHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGISSSSTTASKSNSNIPGLNSIDKTKIGATGASAKLSGGHKNNNNNNSVATFPNTTPNGMKLPIFDPTQLQYPSHLFWQHSPAAAAAAFGQMPIDFNRNAATQGGIGNNINTDLLKSRIQRYQEEVIRSAGGSGSSGATNANSPSPISSPLSGQNHHALNLNANGSSFLDGIIRQTLDRKSGEVLPPASAGGALLDQLLVKKTPLPFTNNRSNEYASSSAVTAAAVAKRSGSPLSYTEIKRERTSPMRSSEDDDDESQSGAEDATLEHNNNKSNLSGNGGLNISEHQRQHQHQQQRSRLTSRDSETDASSVKSERMHATTHHQNHNNTSKMVDLNGSSIAVTSKTEMPLESMGNTSILQEKLAQIKAEQESEENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-