Basic Information

Gene Symbol
kn
Assembly
GCA_963691655.1
Location
OY829328.1:54966097-54971637[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-121 1.2e-116 391.0 0.0 205 385 1 209 1 212 0.99
2 2 1.7e-11 4.8e-07 29.1 12.4 423 508 213 304 210 314 0.75

Sequence Information

Coding Sequence
ATGCGAAGATTTCAGgTTGTTATTTCTACACAAGTTGCTGTTGATGGACCACTCCTAGCCATATCTGACAATATGTTTGTGCACAATAATTCTAAACACGGGCGTAGAGCTAAACGATTGGATACAACGGAAGGTACCGGAAATTCCTCCCTGTCCATTTCGGGTCACTCCCTTGCTCCTGACAGTACCTATGATGgTTTGTATCCACCTTTACCTGTAGCTACACCGTGCATCAAGGCAATATCGCCAAGTGAAGGCTGGACAACAGGTGGCGCAACAGTGATAATAGTAGGTGACAACTTTTTCGATGGCCTTCAAGTTGTTTTCGGTACAATGTTAGTATGGAGCGAATTGATTACTTCCCATGCCATACGCGTACAAACACCGCCACGTCATATACCCGGCGTTGTTGAAGTTACATTATCATACAAGAGCAAACAATTCTGCAAAGGATCGCCGGGGCgttttgtatatgtttCTCTTAACGAGCCTACGATAGATTATGGGTTTCAACGGCTACAGAAGTTAATACCACGTCATCCTGGCGATCCTGAAAAATTACAGAAGGAAATCATACTTAAGCGTGCAGCCGATTTAGTAGAGGCTTTATATTCAATGCCAAGATCACCTGGTGGTTCTACGGGTTTCAACTCATATGCCGGTCAATTAGCAGTAAGTGTGCAAGATAGTGCGGGTCAATGGACAGAAGATGATTACCAGCGCGCTCAATCGAGCAGCGTAAGTCCACGTGGTGGATACTGTAGCAGCGCCTCCACCCCACATAGTTCAGGCGGATCATATGGTGCTACCACTGCCGGAGCCAATGGCTACGGACCTACACCTAATATGGGGACGTTATCTTCTTCACCCGGAAGTGTTTTCAATTCAACAACAATGTCGTCGCCGTGGCATCAAGCTCTAGTCCAACACCATCATACGCATCCCCATCACTATCATCACCCGCACCACCAACCGTGGCATAATCCAGCCGTTTCAACTGCAACGGCGGCAGTTTAG
Protein Sequence
MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSISGHSLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDSAGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATTAGANGYGPTPNMGTLSSSPGSVFNSTTMSSPWHQALVQHHHTHPHHYHHPHHQPWHNPAVSTATAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01132709;
90% Identity
iTF_01132709;
80% Identity
-