Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963691655.1
Location
OY829329.1:951863-957727[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-26 1.2e-22 80.7 0.1 2 89 230 313 229 313 0.95

Sequence Information

Coding Sequence
ATGTCCACCAAAGTCTCCGCAGCTGATAGCAGTAGCAGCACTGCTACAAATAGTTCTCCAAATACTTCAACAGCAGCGACTGCTATCACAAATGGTAATGCTACACCAGCTAGACGTCTTCGCACACGCACATCTACCAGTGGCAGTAATGTCAGCGGCAGCGACTCTgcgaagaaaaacaacaatggtCCGCTTATGGAGCGCACCAACTATACAAACGATTCAGCAGCGAATGCCGCCGCTGGGACAGTTGCATCTTCAACTACCGCTGATGATAAGCCGAGCTCCAGCAGTGGCAGCCACAACAGTGGTAGTAGCAGCGGAGGTGGAGGTGGATCTGGAAAGAAGTACCACAATAGTTGCCCATTTCCAACAAGTTCAACGACGACAGGACGGAAGGCACAAATGCATTCACAGCCGCATAGTTCCAGCACCTTTAATATGAATAAGAACgaagaatttaattttgatacgcccattgAGTGTCCCGTCTTTCGTCCCACGCCAGAAGAATTCAAGAGTCCACTCACATACATCAGCAAAATTCGTCCGATAGCCGAAAAGTGCGGCATCGCAAAGATATTACCACCTGACTCGTGGTCGCCACCATTTGCTGTGGACGTTGATAAACTAAAGTTCACACCGCGCGTACAGCGGCTTAATGAACTGGAGGCAAAGACGCGTGTTAAGTTAAATTTTCTCGATCAGATCGCCAAGTTCTGGGAGTTGCAAGGATCTTCTTTGAAGATACCAATGGTCGAACGTAAGGCGTTGGATTTGTACACGCTTCATCGCATTGTACAGGAGGAGGGTGGCATGGAGCAGACAACCAAGGAGCGCAAATGGGCAAAAGTTGCCAATCGCATGTCGTACCCCTCGAGCAAAAGTGTTGGAGCAACATTGAAGGCGCACTACGAACGCATACTACATCCTTTCGAAGTTTATACATCAGGAAAAGTATTGGGGGCAGCTGCCACTTCTACTGCAAATCCTGAAGCCGCATCAACTTCCACTACTGTGAAATTAGAGGATGGCACTGATTATAAGGTACATGAAATCCCGACACGTCAACAGATTGCACCTCCGAATGAGAACAATGCACGTCGTTCAAAACGTTTCGCCAACTCGAGCGCAAATTGTGGCCTGGGCGGAGCTGCAAGAGGCGGCAGCGGCGGCGGCGGAAACAacattaaaattgaaacaaaggaAGACTTCAAGCGAGATTTATTGAACTGCTTCAATGCAGCCGGCGCATCGACGTCGTCAGTTGGGCGAGGAGCGAGTGGTGCTGCGACGGCTTCACAGAAGAAGGCTCCTGACCCGCAACTGGTGGATCCACTGATGAAATACATTTGTCACATTTGTAATCGCGGTGACGTAGAAGAATCGATGCTGTTGTGCGATGGATGCGACGATAGCTATCACACATTTTGTCTGTTGCCTCCGCTGTCGAGCATTCCAAAAGGTGAATGGTTATGCCCACGTTGCGTCGTCGAAGAGGTCAGCAAACCTACAGAAGCTTTCGGCTTCGAACAGGCCGAACGAGAGTATACTCTACAGCAATTCGGTCAAATGGCAGATCAATTCAAGATGGACTACTTCCGGAAGCCAGTACACTTGGTACCAACTAATCTCGTGGAACGCGAGTTCTGGCGCATTGTCTCCTCTATAGACGAAGATGTAACAGTGGAGTATGGTGCTGATTTGCATACCATGGATCATGGTTCTGGCTTTCCCACAAAAAGCTCACTGTATTTGCTTCCCGGAGATCAAGAATATGCGGAATCCAGCTGGAATTTAAACAATCTTCCTCTTTTGGAAGATTCCATCCTAGGGCATATTAATGCCGACATTAGTGGCATGAATGCCCCATGGATGTACGTGGGCATGTGCTTTGCTGCATTCTGCTGGCATAACGAAGATCACTGGAGCTACTCTATCAATTATTTACACTGGGGTGAGCCTAAAACTTGGTATGGCGTTCCAGGCAGTTACGCTGAATCTTTCGAGGAGACAATGAAGCAAGCAGCACCTGAACTTTTTGCATCGCAACCCGATTTGTTGCATCAACTAGTGACTATTATGaatccaaatattttaatgaacaaCGGAGTGCCCGTCTACCGCACAGATCAAAACGCAGGCGAGTTCGTTATCACATTTCCACGCGCGTATCATGCTGGCTTCAATCAAGGCTATAACTTTGCTGAAGCGGTAAATTTTGCACCGGCCGATTGGCTAAAGATGGGACGTGAATGTGTCAATCATTATTCTATGCTACGTCGGTTCTGCGTCTTTTCGCATGATGAACTCGTCTGCAAAATGGCACTTGAGCCCGCTAAATTAACGTTCGGAATTGCGACTGCCTGCTATATTGATATGGCCGAAATGGTGGACTCCGAAAAGAAATTGCGCAAGTCGCTGCTCGAGTGGGGCGTCACACGGGCTGAACGCAAAGCTTTCGAGCTAGTACCGGACGATGAACGTCATTGCCAGGAATGTAATACCACATGCTTCCTTTCTGCAGTTTCGTGCGAATGCACCAAGGCGATTGTGTGCTTACGTCATTACACTGTGCTTTGCGCTTGTCCACCGGAGAAGCATACGCTACTCTATCGCTACACTCTGGACGAAATGCCACTCATGCTGCAGAAACTTAAGGCGAAGGCTCAAAGCTTTGAGCGTTGGCTTTCGCGCTGCCGCGACATCATTGACGCAAGTACACCAACTTCGGTTTCTCTAGCCGAACTGCAGGAACTATGCAAGGAAGCTGAGCTAAAAAAGTTTCCATCGTCGTTGCTTATTGATCGCTTAAATGCCGCCGTTCTTGAGGCCGAGAAATGTGTTACTGTTATCCAGCAATTGGGAATAAATAAGgtACGTACTCGTTCGGACAATAACCTTGAGGCGGCTCAGTATAAACTCACAATGGAGGAACTTGAACTATTCGTCCAGGAGATCGATAATCTATGTTGCGTCATCGAGGAAGGCACGTCCGTTCGTGAGCTGCTCGAGCTTGGCAGGCAGTTTGTAGAACGGGCCAACGTCATGCTTAAACGTTCACTCGACTCAATAGAGGAATCCGAAATGGAGATGCTTATAAGCGAGGGCAATTCACTGCGCATCGAGCTGTATCAGATGCAAACGCTAAATATGCGTCTTAAGCAGTTGAAGTGGTTCAAGCGTTCGCAGGGACTACGAAATGCTAGTACCAAGTTAACATATGCTGATATTAAGAATCTGCTGAGTGTTGCCACAGCAGAAGTAGCACCTTCAGATCCCTTAGTCGACAAAGAAATACGGAAACTGCAGGAGATTGGTGCGTCCATTGAAGCCTGGGAAAAGCAAGCCGCCAAGTACTTCCGTGGCAATATGCAGCAGCATGAGCTTGTGGAAATCGAACAGTTTCTGAAGACTGCAGCCGATATTGAAGGACAAGTACCATCGTACGTAACTCTGAAAGATGCGTTGCGCAAGGCAAAGGACTGGCTGCGTTCCGTGCAAGAATTGCAGGCCACCAAAGGCGACCATCCTTATTGTCACATGCTGGAAGTAATGGTACAACGTGGTCGCAATAATCCCATTATATTAGAGGAACTTGTACGCATCCAGGGTCAATTGAGCAGCGTTCAAGAATGGAAAGAGAACACATCGCAGGCGTTCCTTAAAAAGCATACATTTTACACTCTTCTCGAGATTTTGATGCCACGCACCTACCCTGTTATTATCGACTCAGATCTCAAGACACCGTTCCAGGATGACTTTGTCAAAGATATGAGCCCTACACAAATTGTAGAATCATTCAAGAAAGCCGAGGAGAAGGAGTTGCGCGATATGCGTGAGTTGCGTCGTCAGAATATGGTGAAAAATCCATTAAATGACGATTATTGTCTATGCAAGACAACATTCTTAGGTGTCATGTATAACTGTCAATTGTGCCGTGATTGGTTCCATGAGGATTGCGTGTCACCACCACCCTCGAATACGGCAATTACTATGCCAATAAATGAATACACATGCAAACCGAAATGGTTATGCCCATCGTGTGTACGCTCAAAGCGGCCACGACTCGAAGTTATTCTACAGCTGCTAGTATCTCTGCAGGCTCTGCCCATGAGGCTGCCCGAAGATGAGGCATTACGCTGCTTGGCCGAACGTGCCATGAGCTTCCAAGAACGTGCAAGTAAGACACTCACAACACCTGACGTGACTGCTGCAATCGAGGCGATAAGGGCTCAACAGCATATAAAACGTAGAAGTCTCGGCAGTGACAATGGCAATCCCAACGGGAATGACAATGAAAATGGTGGTTGTACAACTCTTAATTCGAAGGATGGTGTTGCAGGAATAGGCGCTGTTCCTGACAACCCGGATACGGATGATGACGATGAAGGACGCTTGCACATTGACGAGGATGCCAGCAATGATGAGGACGATCCCCCTGTTAATAACAAAGGTATCTTACCACGACCCTCTGTCGACTTACAGAAACTACTCTCGGAcagtgaaattgaaaatctaGGAGAGCTGATGATGGAAGGTGATTTGCTGGAAGTCTCATTGGATGAGACTGTTGAATTGTGGGGTATACTGTCGGCAGTGCAGCCAATAGTATTATCTCAAGCCGCTACACTCGTTGCACAACATCAACTGCAGCAGAAGCAACATCCACAACCCGCATCGAGTGTAAACTCCGCCGCCGAAGATTCAAATGACAGCCTCATCGTACAGAGCAGCCCGAACAGCAACAGCGGAAGCCTTAGTGGGCGCAATTCGTCCAACAATATCACAGGCAGGAAAAGACGCTCACTGGATCCAAACACCGGGTGCCCAGTGGTGCGGAAGCGAACCGCCACTCCAAGCAAGCAACAACCAAATGCTGCCGTCAAAAAATCAGCACGGAAATCGGAAACCGTTAAGCAACAAGTGGAGAATATTAACGATAAAGCTGCAAATGGCGCCAATGTTGCTAGCAACTCCACAACGGGCTCACAGAAAAAACGCAAACGTGTTGGCAATAATGCCAATGCATCTACCAGTAGTGGTAGTGCTGTAAATGTGACAATCGCCGGCCAGAAGAAGCACTCACAGCGCGCTCAAATGGTGCAGCAAGAAGACGAAGAGGAGCAATGCCGAGCGGACAATTGTCGGCATCCTACGGGACGCGAAGTCGACTGGGTGCAATGTGATGGCGGCTGCAATGAATGGTTCCACATGTTTTGTGTTGGCATTATTCGGAGCCAAATTAAGATTGACGACGACTATGTATGTAAAACTTGCAAGTTGAAGCTTGAAATCAACAAAGAtcccaacagcaacaactccaCGACAACAATTGCAACTAGCGTTACAACGACCACTTCTATAAATTCTGCTCtgaaccacaacaacaacagcaataataataatacaccacaacaacaacagacatCAGTAGCACCCTCAAATCAAAAGGGCCGACCACAAACATCGCGgtaa
Protein Sequence
MSTKVSAADSSSSTATNSSPNTSTAATAITNGNATPARRLRTRTSTSGSNVSGSDSAKKNNNGPLMERTNYTNDSAANAAAGTVASSTTADDKPSSSSGSHNSGSSSGGGGGSGKKYHNSCPFPTSSTTTGRKAQMHSQPHSSSTFNMNKNEEFNFDTPIECPVFRPTPEEFKSPLTYISKIRPIAEKCGIAKILPPDSWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMSYPSSKSVGATLKAHYERILHPFEVYTSGKVLGAAATSTANPEAASTSTTVKLEDGTDYKVHEIPTRQQIAPPNENNARRSKRFANSSANCGLGGAARGGSGGGGNNIKIETKEDFKRDLLNCFNAAGASTSSVGRGASGAATASQKKAPDPQLVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKMDYFRKPVHLVPTNLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSYAESFEETMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELVPDDERHCQECNTTCFLSAVSCECTKAIVCLRHYTVLCACPPEKHTLLYRYTLDEMPLMLQKLKAKAQSFERWLSRCRDIIDASTPTSVSLAELQELCKEAELKKFPSSLLIDRLNAAVLEAEKCVTVIQQLGINKVRTRSDNNLEAAQYKLTMEELELFVQEIDNLCCVIEEGTSVRELLELGRQFVERANVMLKRSLDSIEESEMEMLISEGNSLRIELYQMQTLNMRLKQLKWFKRSQGLRNASTKLTYADIKNLLSVATAEVAPSDPLVDKEIRKLQEIGASIEAWEKQAAKYFRGNMQQHELVEIEQFLKTAADIEGQVPSYVTLKDALRKAKDWLRSVQELQATKGDHPYCHMLEVMVQRGRNNPIILEELVRIQGQLSSVQEWKENTSQAFLKKHTFYTLLEILMPRTYPVIIDSDLKTPFQDDFVKDMSPTQIVESFKKAEEKELRDMRELRRQNMVKNPLNDDYCLCKTTFLGVMYNCQLCRDWFHEDCVSPPPSNTAITMPINEYTCKPKWLCPSCVRSKRPRLEVILQLLVSLQALPMRLPEDEALRCLAERAMSFQERASKTLTTPDVTAAIEAIRAQQHIKRRSLGSDNGNPNGNDNENGGCTTLNSKDGVAGIGAVPDNPDTDDDDEGRLHIDEDASNDEDDPPVNNKGILPRPSVDLQKLLSDSEIENLGELMMEGDLLEVSLDETVELWGILSAVQPIVLSQAATLVAQHQLQQKQHPQPASSVNSAAEDSNDSLIVQSSPNSNSGSLSGRNSSNNITGRKRRSLDPNTGCPVVRKRTATPSKQQPNAAVKKSARKSETVKQQVENINDKAANGANVASNSTTGSQKKRKRVGNNANASTSSGSAVNVTIAGQKKHSQRAQMVQQEDEEEQCRADNCRHPTGREVDWVQCDGGCNEWFHMFCVGIIRSQIKIDDDYVCKTCKLKLEINKDPNSNNSTTTIATSVTTTTSINSALNHNNNSNNNNTPQQQQTSVAPSNQKGRPQTSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01132705;
90% Identity
iTF_01132705;
80% Identity
-