Ttub000366.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus tubicola
Gene Symbol
pnr
Assembly
GCA_035583055.1
Location
JAWWEQ010000001.1:4810346-4836229[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.3 3.7e+04 -4.1 0.1 18 26 53 61 49 62 0.75
2 3 3.1 1.4e+04 -2.7 0.0 7 13 267 273 265 278 0.87
3 3 3.3e-15 1.5e-11 45.2 5.1 1 34 647 679 647 681 0.97

Sequence Information

Coding Sequence
ATGATTGACATACCGGCCAAATTCTACGAGCTGTGCCGGCTTTGCTTGTCCCCGCATGGCGCTAAGCTGTCGGTATACGATAAGGAGGGCAGAGACCGAAAGCTCATTGAGAAAATGGACAGATGCCTGGAGCTCGTCGTGAAAAAGAACGATTTGATGCCACTTATGATCTGCCACCGATGTATATACAAACTTGATGTGTTCCACGACTTTCAAGAATCTACTAAAAATACGGATCACATGCTGAGGCAGTACGTGGAATGCGCAAAAAAGATAACGAAGGAGGAACtgGCGGCTTTCAAAGAATCAGCCCCACTACCAGCCCCATTACCACGTCCTACATGGGAAGAGCATCGAGCACTTCTCGCAGCTTTCGTGGAACTGAACAACCGCATATTTGAGAATCGTCCAGTGGAGGAGCCAATTGATTATCTACGCCTACAGAACATTAAGGCCCAGCCAACACGCGCTAATCTTTTAAATCAGAGCACGCAACAGGGTTGCTCAGTCTTAGAGGATGACACTTGCGACGACAGTGATGATCCAGAAAGGCTTAAGATCGACGTTAGGACAGAAGACGATGAGGATGTGAAGAGTAGCAACGAGAGTGGGCATGATAGTCCGCGTAAAAGGCGAAAACTTAACGTTAAAGagaaaccaaaaaaagaaaagattgagCCAAAAGCTGAAAAGATGGAACCAATAGAGGTTAAGGTGGAACGTCGAAGTCCGTCTAACAGTCCTATCCTTAACAGGTTGGACACACCGGAGAGCAATTGCTCTGATCCTAGTGATATAGACAATACGAAACTCTGGCACGCGCTTGCTAAACCTGACGACAACAATGGTTTAGACTACAGGCGATTAAACGGCGCCCATCCGACGACGCCGCGAGTCGCAACACCAATCGCAACACCGATGGCATCGACGCTAGTCAGCAATGGTTTTGGAGCTCCATTAGCAGGAGTGCCAAGTGTCGATATAACATCGAAATTGCTTCATAGTCTCATGAACAACAACCGTCAACTCGGCATGTCGGCGGCGGTAGGATCAGCAGTCGCCGCGGCCGTGGTAACTGCTgcacaacagcaacagcaggcTTTAGCTGCGGCTGCTGCCAGTGGGATATCTCCGCCACAGGTTCTATTTTACCAAGAACCAGCGGTACCGTCGACTGCTCAGTCAGATGGAGCTACGACGAATAAGGTGAGCGTAAGTGGAGCGCCGTTGAATTTATCTACGAATAAATTAACTgagaaaaagaatgaatttgGCCTCCGGCATCGAAGTGAAGTCGGCAATCTGGCATCAAACGACAGCAATCCGTCCAGTCCCGGTAGTGTGATACGTAAAGAAACGAAAGGTCGTCGAAAACAGAGTTACCCAGTCAAAGCGCCTGTTAGTCCATCTCTGAATTATGTTGTTGCCGATGAAGAACAAGCCGAGGCACAAGATTATACTGCATGGTCTAAAAGAGAGACGGCATGCAGTCCGAAGGTACTCGCGAGGGTAAAAGAGTTTGAACAACAGCAAATAAGGAAACAACAAGAAGCAGAGCGATTGAAACAAGAACGTAAAAGACAGCGAGAAGAGGCAGAGCGGTTACAACAAGAACGTCAAAGACAGCTAGAAGAGGAAGATCGATTGCAAAGAcgtcaacagcagcagcaaagaCAGCAACAGTCACGACAGAGGCAGCAACAAAGACATAGAGATTTGCCAGACGAAAGGCAATTGGAAAACCTGCAGTTACAAGAACCACCAGAAGAACGACAGCCTCTGGTAGTTCCAATGGATTTCCAGCAAGATGCAATGAATTTGCAGCAAAATGCAgctgtagctgctgctgcagcagttGACAATAATAATGGCGTTGCTCCCAATAACAACAACGGCGCTGCTGCAAATAACAACGGTGGAAAGAAAAGTGACATGATCTGCACTAATTGCGGCACAGGTACCACGACGATCTGGAGACGAAATATGACGGGAGAGATGGTCTGCAACGCGTGCGGACTCTACTTCAAACTGCATAAAATTAATCGGCCACCGACAATGCGCAGAGACACAATCCACACGCGAAGGCGCAGGCCCAAGGGCGAGAAGGGAGCTAAGGGTAAAAAAAAAGGAGAAGCTGCAGGACAAGAAGCAGCTGCTGGACAAGAAGGAGTTGTGGAACAAGAACAGGGAGGAGGATCTGTGGTACAGGTACAGGTACAGCACGTGTCTTCAGTAGTACTGGCAGATACAGTAGCGCCTCCAGTACCGCCACAGGCTATTAGTCCAAATAATTCACAGATGTTGGAAGCGCTGCGAGTACAGATCCAGCCACACTTTTTGATCGCTGCCATGAGGTCAAATGCTCAAGCGGTAGCCAGTGCAGCGGGTGGAGCTTTACCACCCAACCCCATGAACTTTAACATTCCCATTGGCTCTTTCATGATTCCGCCGGTTCAGCCTGAAGATGAACGATCGTACGGTGCAGAAGACAATGCCGCTGTCAATGACGATGAGgaaaatgtaaatgatttacCTCTTAATCTTGTATCGACTTCGCTCAACGAGGAGTCGCAGAACGAGTGA
Protein Sequence
MIDIPAKFYELCRLCLSPHGAKLSVYDKEGRDRKLIEKMDRCLELVVKKNDLMPLMICHRCIYKLDVFHDFQESTKNTDHMLRQYVECAKKITKEELAAFKESAPLPAPLPRPTWEEHRALLAAFVELNNRIFENRPVEEPIDYLRLQNIKAQPTRANLLNQSTQQGCSVLEDDTCDDSDDPERLKIDVRTEDDEDVKSSNESGHDSPRKRRKLNVKEKPKKEKIEPKAEKMEPIEVKVERRSPSNSPILNRLDTPESNCSDPSDIDNTKLWHALAKPDDNNGLDYRRLNGAHPTTPRVATPIATPMASTLVSNGFGAPLAGVPSVDITSKLLHSLMNNNRQLGMSAAVGSAVAAAVVTAAQQQQQALAAAAASGISPPQVLFYQEPAVPSTAQSDGATTNKVSVSGAPLNLSTNKLTEKKNEFGLRHRSEVGNLASNDSNPSSPGSVIRKETKGRRKQSYPVKAPVSPSLNYVVADEEQAEAQDYTAWSKRETACSPKVLARVKEFEQQQIRKQQEAERLKQERKRQREEAERLQQERQRQLEEEDRLQRRQQQQQRQQQSRQRQQQRHRDLPDERQLENLQLQEPPEERQPLVVPMDFQQDAMNLQQNAAVAAAAAVDNNNGVAPNNNNGAAANNNGGKKSDMICTNCGTGTTTIWRRNMTGEMVCNACGLYFKLHKINRPPTMRRDTIHTRRRRPKGEKGAKGKKKGEAAGQEAAAGQEGVVEQEQGGGSVVQVQVQHVSSVVLADTVAPPVPPQAISPNNSQMLEALRVQIQPHFLIAAMRSNAQAVASAAGGALPPNPMNFNIPIGSFMIPPVQPEDERSYGAEDNAAVNDDEENVNDLPLNLVSTSLNEESQNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-