Basic Information

Insect: Torymus tubicola
Gene Symbol: -
Assembly: GCA_035583055.1
Location: JAWWEQ010000001.1:2183853-2188899[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.16 33 6.7 0.4 1 19 703 721 703 722 0.87

2 8 3.2e-05 0.0066 18.3 4.1 1 23 732 754 732 754 0.99

3 8 6e-06 0.0013 20.6 3.1 1 23 760 782 760 782 0.96

4 8 0.00017 0.036 16.0 0.8 3 23 790 811 788 811 0.95

5 8 0.0029 0.62 12.1 3.6 1 23 816 838 816 838 0.98

6 8 1.8e-05 0.0038 19.1 7.4 1 23 844 866 844 866 0.99

7 8 0.68 1.4e+02 4.7 5.4 1 20 873 892 873 895 0.92

8 8 0.00013 0.028 16.4 9.7 1 23 901 923 901 924 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.16	33	6.7	0.4	1	19	703	721	703	722	0.87
2	8	3.2e-05	0.0066	18.3	4.1	1	23	732	754	732	754	0.99
3	8	6e-06	0.0013	20.6	3.1	1	23	760	782	760	782	0.96
4	8	0.00017	0.036	16.0	0.8	3	23	790	811	788	811	0.95
5	8	0.0029	0.62	12.1	3.6	1	23	816	838	816	838	0.98
6	8	1.8e-05	0.0038	19.1	7.4	1	23	844	866	844	866	0.99
7	8	0.68	1.4e+02	4.7	5.4	1	20	873	892	873	895	0.92
8	8	0.00013	0.028	16.4	9.7	1	23	901	923	901	924	0.95

Sequence Information

Coding Sequence: ATGGGTGAGTGTCCTTTGTGTGGTCAGTCGACGCAGAAAGCTAGCGCCAGACTGATAAAAGATGCCTGCGGACACATGAAGTGTAGAATGTGCCTGCTACAGGAGGAGAATGGCTGCAGGATTTGTAAAGAAGCAAGCCTGGATAACTCACCTCACAAGATTAGTTCTATCGGTAATTTTGatttttcactTCCCGAGACGAATTCATTAGGATCGCCAAATTATGAAAATCCTAATTGTACACCTATCCAATTGGATATCAATAAAATCCCAGATAATTATGGGTATGACTGCATATCTCCTGTAAAGAATCATGCTGTAAATGGAAACAATGTTCAAAATGTTGTCGAGAACcataataaagaaacaaaaactgAAGTCAAAACTATAAATACACAAACGGACATAAATACTTTTTTACCTCCACTTCCACCAAAAGTAAATTATCAGTTGAATAACGCACCACTTCTACTTGCCAATAATAGTCCAAATAAGCCACAAAGTATTATACTTCCAACAAACGAAGCTTCAAAAGTACCACAGAATGTAGTAGCAAATATTAATAAGCCACCATCAAATCTTATGCTGATTTTACTTACCCCTATGCAAAAGAAACTTCCAACAAATGAGAATGAAGTTGCAAAAATAATGCCTCAAATTCAGAATTCAAATATTAGTCTGCCGAACACATTAGGAATGCCTTTTGGATTCATTAACAATGGTACCAATAATCTGAAACAttccaataatttattaattttcaataataaaaatatgataaatacgAGTCAAGAAAGTATAACAACTGTAAATCAAGGAAATCTCACAAATGTCAATCACAGTAATCTCACAAACATAAATCCAGGAAATCTTACAAATTTAAATCACAGTAATCTCACAAATATAAATCCAGGAAATCTCGTAAGTATAAATCAAGGAGAACTTCCAAATTTAAATGAAGAAGATCTTTCAAATTTAAGTCAAGAAAATCTCCCAGATCTAGATAAAGGAAATCTTCCAAATTTAAATCAAGAAAGTATTGCAAACACTAGTCTTGAAAATGTAGTTCAAAATTtgactgaaaatattaattgcaatGAATTAAGTGAAACTTTTAATCAGCCTAGTGAGAGTCCAGACTATAGGTTGAAAGATTACTTAGTTGTGAGAAGTCGAAGTGAAAGACAACCTGATGATTTAATTGGAAATTCCCTTCCATTTCTCAATAACAAATGTCTAAGTGAGAGACTTCCTAATGAGCCATTTGGAGATTCTATTccgtattttaataaagaatctCATGACTTGTCTGAAAGTAATACTGTAACAAATGAATTAACTGAAGATAATATTCTAAGTGACACAAATCCAGAAGAGGAATTATCTGATttcttgttatttaaaaataaacctacCACAGCTAGTGATACACAAAAAAGCTCCAATgaatgtgaaaacaatggtCAATTGAATAGCAATATATCtgaaactaaagaaaaagatattaatagtaTAGAATTATCTAAATCTACAGTACAAGTGAACACCGATGAGTCAACTGTTGAGATTGTTAACAAACCTTTAGATATTGAAAATAGGCTTAATGACCAAGAAGATaacaaattagaattaaaatcaattagaaaAGCTACGAAAAACGACgaaaataaagagaataaagaaaaaatgaaagagaagaaAGTAGAAATTAGGATATTGCAAAATGTCGTTGTAAAACGTGGAAGAAAACCAAAACCAAAAATTATCGGCGATGAGATCGTCGGACGTTCATATGGTCATATGATtttaaagagaaagaaaataaaagcatcCACAGACGATACAGAGGTGTCGGATTTATCAAGTCAAGATGTTCAAATTAACAAGCACACAGTTCCTACCAGTCACAAAGATTCTATAAACGGTATGGAATcgaataagaaaaatgatgcaCCAGCACTTGGaagaggaaaaaggaaaaaaatgccCAAAATTCTGCTATACGAAGATGACACTATccagCTGGAAAACATGGTGAAGCCGAAGCGCACAAGGCGCTCCAACAATGACTGGAGCCACATAATCCGACTGCCGGAGATGAGCACATATAAGTGCACCGCCTGTGACAAGATTTTTCGCAAGCTACGCAACCGCGCGTACCATGCGGTCTGCCGGGCAAATGTGACGCCCACTTATCGCTGCGAAAGCTGCAACCGCACATTTGCAACTCGCTCCCACTACGAGTACCATCAGCGCGTCCATGAGAACAACAAACCCTTCAGCTGTGACCATTGCGGCAAAAGctttataacaaaaaacaaGCTTAATCGACACTTCATTGTGCACCagaaaaatctaataattgATTGCAATGAATGTGGAAAAAAATTCACATCAATGCTGTATTTAAAGagtcatttgaaatatttgcataaaaataccGTTTTTCAATGCAAATATTGTCCAAAACGTTATACCGCCAAAACTAATAAATCACGTCACGAAAAGTCGCATTTCAATGATCGTCCGTACAAATGTACTCATTGCTCTAAGAGGtttaagatgaaatttttattaactcgACATCTACGAACAcacgagaaaaataataaaactttctgcTGTCACTTCTGTAATCGAATGTTTTTGACAAAATTCGAAGTAAGACGGCACATGCCGGTTCATTTAGaagaAAAACCACATACCTGTGAGCACTGTCGCGAGAGTTTTAGTCGTCTAGATAACTTGAAACGACACATTAAACACCACCATTTAGACGATTTATTCAATCaatatgtaaaaagtaatttgcCGGTATCGGCGGAAAGTGAAGACATTAAGGAACTAATACCGGTTAAAAGTTCACAGCATATCAAAGAAGATAAGTCACCAAAAGAGAAAGATCAGACCAAAGATGAAAGGCTCGTTCAAGAAAACACATCATCACAAGTAGCAGAAGATATTGTTGATCAGATAATTCAAGAACAAAAATGCACAGAGGAGATATTACCAAAGgaacaaaaaattgaagaaaatatgtcGTCACAATCACCATcacaaaaaatggaaaatggtGATATAGAAGGATCACTAGAAACACATACAAGCAATGAGGATAAAACTACATCACAAGAACAGAAATCTATAGAAAAACCGCTAAGGATACAAGAGCAAGAATCAAATGAAGAGAAAATATTGTCACCAGATGAAAATCATGTTGAACAGATATCATCAACAAAAGAGAAACAGTCAGAAGAGAAGATACAATCACCAAAACAGGAAAAGGCTAAAAAACTTGTGCAATCGGCAGAAAAAGTACAGTTTCTAGAACCGAGTCAAGTAGAAAATCCATTACCCGTGAAAAGGAAACGAGGAAGACCACGAAAATACGCTGTAGACGTAAAATTGATCGAAAAAAATGTTCCCGCGAAACGAGGAAGACCAAGGAAATATGACTCTGATGGAAATTTAATCGAAAGGAAGAAAATTGTAGTCGTACCTCCGCCTACGATCATCTCTAGACctgaacgaagaaagagaggcCCGAGGTCGATTTCGACATCGAGCACGATTAGCTCAAGGTCATCAAAGTCGAATCAGTCCTCACCAAACCCCTACCTGTCACCGAGGTCATACGAGCTTAGCAATGCAGTGCCGGTAATCCGGGGTCCGATCAAGCTCAAGCGCTTCGCCGAGGACTTGCCCGAGGCACGGCCTGGCCCCTTCCAACAGCTTCCACGCGAGGCTGTACTCGTGCTTAATCGCGAGTTTGAGGAAAAGGCGTCTTGCAGCTTCCCTGGCTTATCCCGCTTGATCAGCGCACCTCCCAGCTTTTCCAGTAGAAGGAGAAATAGTAACGGAAATACACATTCGAATGAGAACACGAATTCAGAGAAATCAAAGACTGGAGATTCGAGTAAGGACGGTGAGAATCAaggacaaaaaaattttcctctacGAAAGGACGTTCACGTGCACTGGCGACGTAGAACTGCCGAACGTTTAAAACCGAGATTGGCTAAGCACTAA
Protein Sequence: MGECPLCGQSTQKASARLIKDACGHMKCRMCLLQEENGCRICKEASLDNSPHKISSIGNFDFSLPETNSLGSPNYENPNCTPIQLDINKIPDNYGYDCISPVKNHAVNGNNVQNVVENHNKETKTEVKTINTQTDINTFLPPLPPKVNYQLNNAPLLLANNSPNKPQSIILPTNEASKVPQNVVANINKPPSNLMLILLTPMQKKLPTNENEVAKIMPQIQNSNISLPNTLGMPFGFINNGTNNLKHSNNLLIFNNKNMINTSQESITTVNQGNLTNVNHSNLTNINPGNLTNLNHSNLTNINPGNLVSINQGELPNLNEEDLSNLSQENLPDLDKGNLPNLNQESIANTSLENVVQNLTENINCNELSETFNQPSESPDYRLKDYLVVRSRSERQPDDLIGNSLPFLNNKCLSERLPNEPFGDSIPYFNKESHDLSESNTVTNELTEDNILSDTNPEEELSDFLLFKNKPTTASDTQKSSNECENNGQLNSNISETKEKDINSIELSKSTVQVNTDESTVEIVNKPLDIENRLNDQEDNKLELKSIRKATKNDENKENKEKMKEKKVEIRILQNVVVKRGRKPKPKIIGDEIVGRSYGHMILKRKKIKASTDDTEVSDLSSQDVQINKHTVPTSHKDSINGMESNKKNDAPALGRGKRKKMPKILLYEDDTIQLENMVKPKRTRRSNNDWSHIIRLPEMSTYKCTACDKIFRKLRNRAYHAVCRANVTPTYRCESCNRTFATRSHYEYHQRVHENNKPFSCDHCGKSFITKNKLNRHFIVHQKNLIIDCNECGKKFTSMLYLKSHLKYLHKNTVFQCKYCPKRYTAKTNKSRHEKSHFNDRPYKCTHCSKRFKMKFLLTRHLRTHEKNNKTFCCHFCNRMFLTKFEVRRHMPVHLEEKPHTCEHCRESFSRLDNLKRHIKHHHLDDLFNQYVKSNLPVSAESEDIKELIPVKSSQHIKEDKSPKEKDQTKDERLVQENTSSQVAEDIVDQIIQEQKCTEEILPKEQKIEENMSSQSPSQKMENGDIEGSLETHTSNEDKTTSQEQKSIEKPLRIQEQESNEEKILSPDENHVEQISSTKEKQSEEKIQSPKQEKAKKLVQSAEKVQFLEPSQVENPLPVKRKRGRPRKYAVDVKLIEKNVPAKRGRPRKYDSDGNLIERKKIVVVPPPTIISRPERRKRGPRSISTSSTISSRSSKSNQSSPNPYLSPRSYELSNAVPVIRGPIKLKRFAEDLPEARPGPFQQLPREAVLVLNREFEEKASCSFPGLSRLISAPPSFSSRRRNSNGNTHSNENTNSEKSKTGDSSKDGENQGQKNFPLRKDVHVHWRRRTAERLKPRLAKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -