Basic Information

Insect: Torymus tubicola
Gene Symbol: -
Assembly: GCA_035583055.1
Location: JAWWEQ010000027.1:21120516-21124139[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.034 7.1 8.8 2.6 1 20 123 142 123 146 0.95

2 12 0.012 2.4 10.2 4.6 2 23 284 306 284 306 0.91

3 12 6.6e-06 0.0014 20.5 0.7 2 23 366 388 365 388 0.95

4 12 0.0022 0.46 12.5 1.5 1 23 546 569 546 569 0.96

5 12 0.00031 0.065 15.2 0.1 3 23 618 639 617 639 0.94

6 12 0.0044 0.92 11.6 0.1 3 23 670 691 669 691 0.93

7 12 0.0093 2 10.5 3.7 2 23 733 755 732 755 0.96

8 12 0.032 6.8 8.9 2.7 3 23 770 791 768 791 0.94

9 12 1.3e-05 0.0026 19.6 0.3 2 23 836 858 836 858 0.96

10 12 4.1 8.6e+02 2.2 0.6 1 23 940 964 940 964 0.96

11 12 8.6e-05 0.018 16.9 0.1 2 23 980 1002 979 1002 0.95

12 12 0.012 2.6 10.1 0.9 1 23 1076 1099 1076 1099 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.034	7.1	8.8	2.6	1	20	123	142	123	146	0.95
2	12	0.012	2.4	10.2	4.6	2	23	284	306	284	306	0.91
3	12	6.6e-06	0.0014	20.5	0.7	2	23	366	388	365	388	0.95
4	12	0.0022	0.46	12.5	1.5	1	23	546	569	546	569	0.96
5	12	0.00031	0.065	15.2	0.1	3	23	618	639	617	639	0.94
6	12	0.0044	0.92	11.6	0.1	3	23	670	691	669	691	0.93
7	12	0.0093	2	10.5	3.7	2	23	733	755	732	755	0.96
8	12	0.032	6.8	8.9	2.7	3	23	770	791	768	791	0.94
9	12	1.3e-05	0.0026	19.6	0.3	2	23	836	858	836	858	0.96
10	12	4.1	8.6e+02	2.2	0.6	1	23	940	964	940	964	0.96
11	12	8.6e-05	0.018	16.9	0.1	2	23	980	1002	979	1002	0.95
12	12	0.012	2.6	10.1	0.9	1	23	1076	1099	1076	1099	0.98

Sequence Information

Coding Sequence: atgTCGTCGAGCCAGGATACGACGGTCCTACCAGAGCCGTCAACGACGACGGGGGCGGTGGAGATCGATAGCGAGGGCTCAAGCTGCGAGGAGCGTGAGTCCCGTAGGCGATTACTGCCCGGCGACCTGGACGGCGGCCTACCCAAGAAGCGCCGGAAACAGTCAACCCCCGTCAAATTTTCCACCTCGCTGACCCTCGGCGCTACTGAGTGCGACGAGTCCGAGGAGGAGCGGCAGCTGCAGCTTCAGCAgtcacaacagcagcagcacgcgtACGATCTGGAAGGTAAGCCAACGACGACGAGCTCGCCACACGCGAAATCCATCCAGGGCCAACAGCACAAAGACGAGAACCTGAACAATGAATTTCGCTGCCAGTATTGTAGTCAATTTTTCGATAGCCGCGTCACGCTCGAGCTCCACCTCGAGTGCGAGCACAACTTTGCGAATAGCGTCGTAGCAGTCGCGCAGCAGCAGTGCTCATCTCCGCCGATGAGTCCGGAAGAAACAAGTCAGCATCAACAGCAGTTTGGTGGttcagagcagcagcagcaaacgaTCGGGCCTATGAATCTGTCGGGGCTGAGCATCAGGAACTTCGCACAGGCGGCGAATGCTTCCTGGCTACAGCAAAGTCAGGCTCCGCAGCTACAGACGCCAAGCGAACAGGCGTCATCACTAGCTAAAATGGCAGCTGCCAGGAATAATAATCACTTCCCACCAATGCCAGCGGGCTTTCCTGGTCCTTTGGCGGGGTTCCTGCCGATGCCTGGCTTTCCCCTGCCCGACAGCGCGCAAATCCAAAGGGCAGCCATGGGCCAGTTCCCCAAGATCTTTAATCCCGACGCGTACTGTGATCTCTGTAATAAAGAATTCTGCAACAAATACTTTCTGAAGACGCACAAGGCTAACAAACACGGGATTTATGTTGATCCACCAGCGGGCCAGTCACAGGGTAACGACAGCACGCCGTCGAGTCCATTTATTACAACCTCTAGCCCTATCGGTAATTTGTCGGGAGCTTTAAGCTTGAAAATGATGGAACCATCGCAAAGTAATGGGATACAGACGCAACAACTGCAGCAGCCGACAATACCTTGCGACATGTGTCCGAAGCGGTTTAAAAATGAAGATTCGCTGAGAAAGCATAGACAGAAGATTCACCTCAACCCAAATAATGAATCGTCTGTTGATTCTACCCAAATGAACattccctcttcttcttccgtTGATGAAGAGAGACAGAGCCCTGGGGGCATGGAAACGCTCTTCAAACAAGAATACAACATAGACCAAGAAGAAGTATCCTATTCTTCAACTCCCAAATCCGTGGCCATGTCACCACCAACAGTACAACAACTTAAAGAAACAGCCCTCAATGGTGATCGCTTACGACGACTTGGTGTTATGAATCCTGAAGCGTTCTGCGAACTCTGTTGCAAAGAATATTGCAACAAATATTTCCTCCGTACACACAAGCTCAAAAAACATGGTATCTTTATTCCTGATAACGATAAGTCACCAAACGCTCCAGGTTCTACAGCTAGCTGGCATCAAGTACAAACAAGCCCGTTAAATCTAATTATGTCCGATAGTCTTGGAAATGGATCCGAGTCAGGAGATCGAACCGAAGAATATGCCTGTAGAACCTGTGGCATACGATTCCAAACGCAGGATCTTTTCCACTTACACATGGAGAAAATTCACGATAGCGAAGAACAACTCTCGCCAAAACCTGAACCTGACGATTTACCTATAGACCAACGAACTGACTCTATTTCTGAAgatcttcaaaagttacaaacTATGATTTTACAATTAAACGGCATGGAGTCCAATAAAGCAGCTTCCTGTGCCCTTTGCGGCAAGGATTACGACACCCCAAGTGCTCTAAGAAGTCATATGGTCAGTGAGCACGGAGTAGTACCGGAAAATTTCACATCACCTCAGCCGCAACAACTGGCGCGTGAAAAATCATCCCCCACTGCCATCGCTGCTCCTGCCTTCTGCACCATGTGCGAAAGAGAGTTCCCCAGCCAAGAAGTCTTGAGAAAACATATCGCAGAAGATCATCAACCATCGACGCCTACCAGTTCGACACCGCAGCTTCCACCTTCTGTTCCAACGACTCCAAAATCAAATGCCTCCCAGCCAACCGAACGCAAAGCCACTGCTTCGATTACGCCTACATCGAGTTACTGCGAGATCTGCAATAAGGAACTATGCAATAAGTACTTCATGAAAACCCACATGCAGAAAATGCATGGTATCGAAATCGAAAATGGTGCGCAGATTGGTGGTGTCATTTGCAACATTTGCAAAAAGGAACTTTGCAGCAAGTACTTCTTAAGAGTACATAAACAGAATACTCATGGTATCGTTGAAGAAGGTGCTTCGTCTGCAAAGCAAGACAATTTTGAATCCCCACCAAATGCCGACGATGTAGCTCTGAAACCTGAACAGCTCGGTGATCTCAATTTGCGCTACATCACTCATTTTACAGAAGTTTGCCCAATCTGCAATCGACGATTCCGTAGTCCTAAATGGCTCAAGCTCCATTTGCAAAGTGAACACGGAAAAGCCGGTGTAGACAAGTGGCGCGAAATCGAACAGTACCACCAATCGCTGCCAAAGACTCCTGCTCGAGTTCCTAGCGTCACCAAGAACTCGCAACAGCCACAAACGCCCGGAAGCACAAATCTTAGGATACCTAATGGTTTTGAAGCCAATCAACAAATAAGGGCGGATCTAGCTGCTCTGGGTAATCAGGTTCTTTCCAACTTCTTCGGTTCATCCGATGATCAGCAAGCTCAAACGTATCGTTGCTCCCAGCCAAACTGCAACTTTTCTACATCCATCTTACCGCTCTTCTTCTTACACGAGAGATCGCACAGTCACGCTCAGGAGAACGCTGTCATCGAGAACGAGCGCCTGCTTCAATGTCCGATCTGCGCTCAGACATTCAACCAGCCTGAAATGCTGCGTCAACATATAGCATCACGGCATCCAAGTCCATTCCCCGGACTTCTCTCACAATTCCCCCTTCCTCTGCTCAACGAGTTTGCATTAAGCAACGAGCAGCCGTTCCAACCCCAAGAGCGAGCTGATTTCTCAGACTCCAAGGAAGACCTGCGTCAGCCGAGTCCCCAGATAATGAATGAAATCGAtacgaataaaatgaaaagccAAGAGGAAAACGCGGTCCAGGTGATGCCTCAGGGCGCCTACAAGTGTTCGCAATGCGGCTTCGCCACGGCCAACCTAAACCGCATCAAGAAGCACATAAAGAAGGACCACAAGAGCCTTGGCGATCCGGCGGAAACAGCTCTGGCGGAACTTAGCAAGACGCTTAAGGACATGGCAAACAAGCATAGGTTCCCCGCCAGCTACGCCATGCCTCAGGataatagcagcagcagcctatCACCCGACAAGACCATCATGCAGCCATTCATCATCGAAGAGCTGGAGAATCCATCATCGCAGAACAACGGCAACTGCGCCGATAGTGAAGCCAGCAATGGCACAGCGTCCAAGAGATTTGCCCCGGCTCTCGTGTTCCTGCCGGTCAAGACGAGAGTCAGCGGCAGCCTCACCGTGTCCTTCACGCTGAACCCTGCCTGA
Protein Sequence: MSSSQDTTVLPEPSTTTGAVEIDSEGSSCEERESRRRLLPGDLDGGLPKKRRKQSTPVKFSTSLTLGATECDESEEERQLQLQQSQQQQHAYDLEGKPTTTSSPHAKSIQGQQHKDENLNNEFRCQYCSQFFDSRVTLELHLECEHNFANSVVAVAQQQCSSPPMSPEETSQHQQQFGGSEQQQQTIGPMNLSGLSIRNFAQAANASWLQQSQAPQLQTPSEQASSLAKMAAARNNNHFPPMPAGFPGPLAGFLPMPGFPLPDSAQIQRAAMGQFPKIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDPPAGQSQGNDSTPSSPFITTSSPIGNLSGALSLKMMEPSQSNGIQTQQLQQPTIPCDMCPKRFKNEDSLRKHRQKIHLNPNNESSVDSTQMNIPSSSSVDEERQSPGGMETLFKQEYNIDQEEVSYSSTPKSVAMSPPTVQQLKETALNGDRLRRLGVMNPEAFCELCCKEYCNKYFLRTHKLKKHGIFIPDNDKSPNAPGSTASWHQVQTSPLNLIMSDSLGNGSESGDRTEEYACRTCGIRFQTQDLFHLHMEKIHDSEEQLSPKPEPDDLPIDQRTDSISEDLQKLQTMILQLNGMESNKAASCALCGKDYDTPSALRSHMVSEHGVVPENFTSPQPQQLAREKSSPTAIAAPAFCTMCEREFPSQEVLRKHIAEDHQPSTPTSSTPQLPPSVPTTPKSNASQPTERKATASITPTSSYCEICNKELCNKYFMKTHMQKMHGIEIENGAQIGGVICNICKKELCSKYFLRVHKQNTHGIVEEGASSAKQDNFESPPNADDVALKPEQLGDLNLRYITHFTEVCPICNRRFRSPKWLKLHLQSEHGKAGVDKWREIEQYHQSLPKTPARVPSVTKNSQQPQTPGSTNLRIPNGFEANQQIRADLAALGNQVLSNFFGSSDDQQAQTYRCSQPNCNFSTSILPLFFLHERSHSHAQENAVIENERLLQCPICAQTFNQPEMLRQHIASRHPSPFPGLLSQFPLPLLNEFALSNEQPFQPQERADFSDSKEDLRQPSPQIMNEIDTNKMKSQEENAVQVMPQGAYKCSQCGFATANLNRIKKHIKKDHKSLGDPAETALAELSKTLKDMANKHRFPASYAMPQDNSSSSLSPDKTIMQPFIIEELENPSSQNNGNCADSEASNGTASKRFAPALVFLPVKTRVSGSLTVSFTLNPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01469121; iTF_01465660; iTF_01468295; iTF_01467424; iTF_01466557;
90% Identity: iTF_01469121; iTF_01465660; iTF_01467424; iTF_01466557; iTF_01468295;
80% Identity: -