Ttub001827.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus tubicola
Gene Symbol
-
Assembly
GCA_035583055.1
Location
JAWWEQ010000001.1:32211866-32236689[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 7.7e-06 0.0016 20.3 1.0 1 23 250 272 250 272 0.98
2 30 0.0033 0.7 12.0 1.9 1 23 295 318 295 318 0.96
3 30 0.00016 0.035 16.1 0.5 2 23 325 347 324 347 0.96
4 30 0.00048 0.1 14.6 0.3 1 20 367 386 367 388 0.94
5 30 0.35 73 5.6 0.0 2 23 496 517 495 517 0.95
6 30 0.0054 1.1 11.3 0.5 1 23 523 546 523 546 0.92
7 30 0.00014 0.03 16.2 0.1 1 23 616 639 616 639 0.96
8 30 0.064 14 7.9 0.4 1 23 645 668 645 668 0.95
9 30 0.15 31 6.8 1.5 1 23 681 703 681 703 0.97
10 30 5.8e-05 0.012 17.5 0.9 3 23 749 770 748 770 0.96
11 30 0.58 1.2e+02 4.9 0.9 2 23 833 856 832 856 0.94
12 30 3.8 8e+02 2.3 0.0 2 23 865 887 865 887 0.84
13 30 0.09 19 7.4 0.1 2 23 894 916 893 916 0.93
14 30 2.9e-05 0.006 18.5 1.2 1 23 924 946 924 946 0.98
15 30 0.00026 0.054 15.4 3.3 1 23 1023 1046 1023 1046 0.97
16 30 0.0027 0.57 12.2 0.4 2 23 1053 1075 1052 1075 0.95
17 30 0.00087 0.18 13.8 4.8 1 21 1110 1130 1110 1131 0.94
18 30 0.0033 0.69 12.0 1.8 2 23 1145 1166 1144 1167 0.93
19 30 0.48 1e+02 5.2 4.3 1 23 1170 1192 1170 1193 0.96
20 30 0.011 2.3 10.3 1.1 2 23 1200 1223 1199 1223 0.93
21 30 1.2 2.5e+02 3.9 0.2 2 23 1231 1253 1231 1253 0.95
22 30 3.4 7.1e+02 2.5 0.0 2 23 1260 1282 1259 1282 0.87
23 30 0.28 58 5.9 2.7 2 23 1291 1313 1291 1313 0.96
24 30 0.32 68 5.7 0.8 2 23 1319 1341 1319 1341 0.93
25 30 0.027 5.6 9.1 0.1 1 23 1407 1430 1407 1430 0.96
26 30 0.015 3.2 9.9 2.5 1 20 1459 1478 1459 1480 0.94
27 30 0.39 82 5.4 1.9 2 23 1572 1594 1571 1594 0.94
28 30 0.59 1.2e+02 4.9 0.3 2 23 1601 1623 1600 1623 0.93
29 30 0.21 44 6.3 1.8 1 23 1634 1656 1634 1656 0.97
30 30 0.0039 0.82 11.7 0.2 3 21 1665 1683 1664 1684 0.93

Sequence Information

Coding Sequence
ATGgagaagcaacagcagcagcagcagaatcagcagcagcagctaaaATTACCGGATGGCGATCAACGCTACGAGGATTTGTGCAGGCTATGCGCGTCTTACGATGCCGTCAAAATGGATATATTTGGCCAGGAAGGGAAGAACCGACAGCTTGTAGACAAGATACAAACCTGCCTACCGTTCAAGATAGCCGAAGATGACAGACTGCCGAAATGCCTTTGCTACAGATGCATGTACAATCTGGAAAACTTTTATGACTTCAGGATTGCCTGCCTTAACGCGGTATCCATGCTCGAGAAATGTCTGCCACCGGAAGAGaaaacgcCGACGATAAAACAGGAAGAGATCGAGATGCCGGAAGAGCCATACTCGGAGTTACGTATGGAATTATTGAAGCAGCAGAAACAGGATAAAGGCGTAGGTGCGCCTACGGGGATGATGATACCAGAAGCGCCAGTTGTCAATCCAAACGCAGCTCTTGGCACACCACCAAGGCTTAGGTCGGATGGCGAACACGAGCCTGAGGGCCATGATGGCGAACGACATAGTAATGATGAAGCCGGCATGGGCGACCAAGATGACCACAAGTCGGACGATTACGACATGGACCTGGAGATGAATCCAAGCGACTTCCTCGAGATGAGCGCCGTAGTCTCAGAAGAAGACGCGAACGCGTTACCTCAGCCTTTGCCACAGCAACAGCAAGACACTGGTGTGTTCCAGCATCGCAACGAGCAACACGAGGTCTACGTCTGTTCACTCTGTAACAAAGCCTTCAGCTCGAAAGGCCATTTATCGttgcacgcacgcatacacgtaGGCGCTGGAGACGTGATCGGTGAAAAAGTGATAACGGACGATCACACGTCTTATAAGAGGCCGTATCAATGCGATCTATGCAACAAATCGTACTCGACAGCTAAGCATCGATGGGGTCATGTGTCGACAACACACAGGGGCCATCCTGCTGTAACGTGTGGTTACTGTTCGCGCATCTATTCGACACGTACGAATCTTGAAGAACACATAAAATCGCGGCACGCGGGCATGCCGCCACCTGCGGAAATGCCGATGTCTTATGTGCAACCGGAATCCCGTTTCCAATGCAAAACTTGTCCTAAGATGTACACAAATGTCACAGATCTCAACAAACACGCGAAAGCGTGTCTTGGCATGCAGCAGCGTAAAGAGCAGCAGTTAGCCAACAACAGTTTTAATGCCCGGAAATTCGcgAAACTTAAAAATGCTCTGGAACCAGGTACCTCGGATATATCTAGCGTAGATTcggattatgaaaataaagattataagaGCGCTGAAGCGAAACTTGCCAAAAACCCTCAGTTGACTATTCTGAAGCAGGCTCTGATAAAGGGTGATAGTGCGAAGAAAGAATACGAGGAGCGACAGAAAATGTTATGCAAACAGAAGAAGCAAACCAATGTGGCTCATAAAGAATCGATGGAAAATGAAGGTAAAAGATGGTACTGCGAGGCCTGCCCCTTGAATTTCGGCAGCGTTGATGAGCTTAGGGAGCACGAGAAAATTCATGATGCCGAGAAGCCTTTCGTTTGTATTTTATGCCAGAAAGATTTCAGTTTGAAGTCGTCCCTGAGCAGGCACATAATTTCGTCGCACGGTGTAGACCCTACGCCATTGGTTGAGAGCGACAAGTGTCTGAAAAAGTCCGTACAAGAGAGCAACATGCAATTGCCACTCATCAAGGAGGAACAGAATATTACCAAAGATAATTCCATGTCGCCATTTTCTGCTGACaatatgGATAATGATGAGGAAGAGGAGCCTGTGAACGGAACAGAAAATCTGCTCGAGGTGGAGACAGTTTTCGTTTGCGAAATTTGCACGCGTGACTTTAATGATCGGGCCTCGCTCTGGCTCCATATTCGTGCTACCCATAAAGAATATGCAGCCTTTGCTTGCGGAATCTGTCTGAAAATCTGCGCGGATAATACACAGCTACTCAGCCACGTTACTATGTACCACGGAGGTCCAAAACTTACTATATCCGAGCAAAGGAGGTACAGCTGCACGATATGCGGCCGACAACACGATTCTCGCAAGAAACTCATAACCCACGTTTCTATTCACAATATTGATCCTGGTTATGATCCGGCAAGTTTCGTTCAATTGAACACTAACTATTATGGTGAAAATGTGAATAGCAACGAAGCTGGTAACGAAGGCCTGATTATGGACTGTGATGACGACAGCGAGAAAGTTGATTGTTATATTTGTTACAAATCCTTCCCCAGCGAGGATCATCTGATTCGACATCAAAGAAATGCGCATAAAACCGAACAAATGGTGCCAGTCGGTGAGTTCGGGCCCAATGGTGGACAACCCGGACAGAATGGTACACATAACAGGGCACAATATCATCTGTTCTTCATTTGCGAGCTGTGTGGAAGCTCTCACCCTAGCAAATGGGAACGCTGGCTGCACGTCAGTGGAATGCACAGTAATGAAGCGTCTATTAAGTGCGAGCGTGACGACTGCGCTAAAATCTTTGCAACGAAAGCTCTGCGCAACGAGCACACGCAGCATCACCAGCTGCAAGGTAGCTCGCCCAATACTTGCGAGATCTGCGGTAAACTGTGGGGTAGTCGTGTTGACTACTGGAAACACGTGATGGGCGTACATGCGGACACTGTACCGCTCATTTGTGGCGTTTGCCTCAAAGTCTTTCCCGATGTGATGCAGCTCAGTCAACATGTCAAGCTTAAACATTGGCCACTGACCAATGGTGATTTTAGTTGCGATGTATGTGGTAGACCATACTCAAACAAGAGTAAGATGTCAAGGCACAGGAAGATTCACGGATTGGATGGAGAACCATATATCCCATCGGCGACGAATAGCAGTCTAATTATTAATGATGCCTCCACGGGCGACCTACCTGGTCTCCCAATGCCACTACAATTGGACAACGGTATGCTACAATCAATGGAGCCATCGCCTCACGACCTCAGTTGCGACATGTGCGGTGACCTCAAGTTCCCCTGTCTGGAGGACCTATGCAATCATCGCCGTATGGCGCACAATCTTTTCCCTTGCGACTTGTGTAACAAGTGTTACGGTCGTACCTCACACCTTTGGAAACACGTAAATCGTGTACACAAAGGTCACGAAGATATTACCTGCAAGTATTGCCTTAAGACAAGTGCATCGAGAGAACATCTAGCTGCACACATTGCTAAAATCCATCGGTACGAACCCGAAGTTAAAATCGAGAGGGACGAAGCAAATTGTAAGAGCAGTACGTACAACGCGGCTGCGGCTGCGGCTTCAGTCGAAGAAGATGGATTGCACTTTTGCGAAAAGTGTAATAAATCGTTCCACAAAAGGTACTTGCTTAGAAGACACATGAAGGGTTGCCAGAATTATAGAAAAGATCCAGGTGCGTTGCTGACGCGATGCAGGGCTTGTGAGCGAATCTTCAAGGACCGAGCAAGTTTGCAGAAGCACATTGAGAATCATCACACGTCGTACCAATGCCACTTGTGTAAGCAAACAGTCACGTCGAAGCTTGGAATCATGACGCACAATCGCATGCATCATATGCATCATCCAGACCTGACCTGTGAACAAGAGAACTGCCGGAAATTATTCAGGACGAAAGAGGATCTTGAATCCCATCGTAAAGACCATAAGCATCATGGCAGTCCGAATGTCTGCGACTTCTGTGGTGACACCGTCGAGAATAAACTCAAGCTCAAGATGCATATCCTTAGTCTGCATAGGAATGAAATCGGCGTTTCTTGTGGCGTCTGTTTGATTCCCATGAAAGATCCAAAGGATCTGAAACGGCACGTCGAAGATGTTCACGAGAGTGTTTTACTTAAGCCTAACACGTGTCAGGTATGCGGTAAACAGTACGCCTCTAAGTGGAAAGCATTCGATCATACAAAAAAATGCCACGGCAAGGTCTTCCGTACGTGCAAGCAGTGCCTCGCTGTATTCACCTCTGACGAGGATCTTCGATACCACTACGAGCATATTCATAACATTCCTAAGGATCAGCTCGACGCGTTCCAGTACAGGCTGGAGGTAGCCGGTAATAAGATGGACGATTATGATCTTGGTCCATTAGAGGTTGTCGTTAAAGAAGAGCCCGAGGAGCTTGACTTTGACGAAGATGCTTTTGAAGATGATAATGGTAACTCGAATGATTCGAAGAGGCGGCGGTCTACTGACACTTTCGATTGCGAAATCTGCCCGGAGATGTTCCTAAATGAGGAATTGTTATCCTCACATTATCGAATTGTGCACAATACAGATCCTCAGAGGATATTTAAGCGCATGAAATTGGAGCCGGCAAGCAAATCGAAAAAGAAAACGCGAGATAGAGAAAACTATGAGTGCAAGAATTGTCAGAAGCAATTCTGCACTAAACCTCTGTATCAGGATCACGTGAGTCAGTGCACACGCAAGGCCATGCCGCCCACGACGTCAATTCTTGAAGCACATTTGAAGAACAATAACCAGATAAAACGCGAGGAACCCGAACCTATAATATGCGAGACAAACTTGAATATTCCCGACTTCAATTTGTTTGAGGATATTAACATGCAGTTGTCGGGTCAGAAGCCTGTACCGAGCCTCATGCCATTAGGTGGCCATTCATCTAAATCATCCAAGTACTCGAGGAAAGACTCGCGTAAGGTTTATGACGAGTCGACAAATACTGAGTGCACGTGTGAGGTATGTGGCAAACAGTGGCCCGCGAAGAAGCATCTGTGGCAGCATTTGATTCGATTCCATAGAGCCCAGGCTGCTGTTACCTGCGGTGTGTGTCTGAAGCTTTGTTCTACGTATGATGATTTAGCGGACCATCTGACGAATATCCACCCGTCGATTCTTAGCACGACGGGCAACAATTTCACATGTAAAATCTGCGGAAGATATCATAACGCTCGCAGTAAACTGTTACTCCACATGAGCATTCACATAAATTGCAAGACTAACAATATGTGCTCAAGATGTAACAGGAGCTTTGAAAACGAAGATAAGCTGAAAGAGCATATTGCTACGTGCATGGGTGCGAGAGAAGAAGGCCAAGGCGTTGATACTGAAGTGCAGCCTGTTAAGGAGGAGAACGAGGAGAAGGGTAGCCTTATTGGTGATGAAGAAGAACCCGAGGAAAATGAGTTTGAATCTGAGGAAGAAAACTCGGGAGATAGTAGCTCCGACAAATCCAACGATTCTGATAACAGTAGTAGCAACAGCAACACGGATAGCTccagtgatgatgatgataacaGCGATGGGACAGATGAAGAAGATGatgaggaagaagaggaagatgaTGAGGATATGGAGGATAAAGCGCGCTACGAAGGCATGTCCGAATCTGAGGAAGAGAATCACGATGAGTACCTGAAGAAAcagcgccagcagcagcagcgtgaaaTTGAGAACCGCTACGAGCAAACGCCTCATAAGGAGCCTATGCTCGTGAATTACTCCGACGATGAGGGTCCACCAGCACTCAGTCCTATGCTACCCGTTGCTATCAAAGCCCCACCCAGTGACGAACACGAGAGTCAAGACGATGATGAATTAGGTGGCAGTCGAGCACGTACAATCAGCGACTCACTTAGTAAGAAAGACAAAAGCGATGAAAGTGGGGACGACAGTAGTGAGCCTGAGCAGGAGGAGGAAGACTCCGATGAGGATGATGAGGAGGACACGATACGCAGACAGGCTCAGGTCGTCGACCCTAACAGCGCCTTCCATGCGGACAATACGTCTCGCAGCAGCAACGAAGttgaagatGAACAAGAAGAAGGTGAGGAacaagaagtagaagaagagcAAGAGTTAGAAGAAATAGAACATGATCAAGAGCAAGAACAAGAGCAAGAGCAGGAACAAgaggaagaagatgaagaagttTTGCACGTCGAACAGGAAGTGCAAGAagtagaggaagaagaagatgaaaatgtTGATCATGGTATAGATGGCACAGAACTAGTTGAAGTTGACGAGAACGATATGCACAATCTCAACGGTACCGTTCTAATGCTAGCCAACGACGCGGACGGCAATCAAATCCTTATTGAACGCAATATGGCCGACCTCGAGAACGATGATTCTGTGCACGATATGGCGCAGTATGTATTCCAGGACGGTACAGGTTTTGCCCTCGAGGACTACGAGGCTATTGTCGAGAGTCAAGCCGATGAAGATGATGAGGAGCACCAGACATACGCGATGGAGATAGGCGACGTTCAGGAAGAGGTCGAGGATCAAGAGCATGTACAGGAAGAAGGGGAGGAAGAGGAGCAGATTGATAGTCGAGAACAGATAGAGGaggaagtagaagaagaagaagtaatagcgaacgaagaagaggaagaagacgaaCATAGTGCCAAAAGCTAA
Protein Sequence
MEKQQQQQQNQQQQLKLPDGDQRYEDLCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRIACLNAVSMLEKCLPPEEKTPTIKQEEIEMPEEPYSELRMELLKQQKQDKGVGAPTGMMIPEAPVVNPNAALGTPPRLRSDGEHEPEGHDGERHSNDEAGMGDQDDHKSDDYDMDLEMNPSDFLEMSAVVSEEDANALPQPLPQQQQDTGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGMPPPAEMPMSYVQPESRFQCKTCPKMYTNVTDLNKHAKACLGMQQRKEQQLANNSFNARKFAKLKNALEPGTSDISSVDSDYENKDYKSAEAKLAKNPQLTILKQALIKGDSAKKEYEERQKMLCKQKKQTNVAHKESMENEGKRWYCEACPLNFGSVDELREHEKIHDAEKPFVCILCQKDFSLKSSLSRHIISSHGVDPTPLVESDKCLKKSVQESNMQLPLIKEEQNITKDNSMSPFSADNMDNDEEEEPVNGTENLLEVETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGICLKICADNTQLLSHVTMYHGGPKLTISEQRRYSCTICGRQHDSRKKLITHVSIHNIDPGYDPASFVQLNTNYYGENVNSNEAGNEGLIMDCDDDSEKVDCYICYKSFPSEDHLIRHQRNAHKTEQMVPVGEFGPNGGQPGQNGTHNRAQYHLFFICELCGSSHPSKWERWLHVSGMHSNEASIKCERDDCAKIFATKALRNEHTQHHQLQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVMQLSQHVKLKHWPLTNGDFSCDVCGRPYSNKSKMSRHRKIHGLDGEPYIPSATNSSLIINDASTGDLPGLPMPLQLDNGMLQSMEPSPHDLSCDMCGDLKFPCLEDLCNHRRMAHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDITCKYCLKTSASREHLAAHIAKIHRYEPEVKIERDEANCKSSTYNAAAAAASVEEDGLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHTSYQCHLCKQTVTSKLGIMTHNRMHHMHHPDLTCEQENCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKRHVEDVHESVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRYHYEHIHNIPKDQLDAFQYRLEVAGNKMDDYDLGPLEVVVKEEPEELDFDEDAFEDDNGNSNDSKRRRSTDTFDCEICPEMFLNEELLSSHYRIVHNTDPQRIFKRMKLEPASKSKKKTRDRENYECKNCQKQFCTKPLYQDHVSQCTRKAMPPTTSILEAHLKNNNQIKREEPEPIICETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGGHSSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAQAAVTCGVCLKLCSTYDDLADHLTNIHPSILSTTGNNFTCKICGRYHNARSKLLLHMSIHINCKTNNMCSRCNRSFENEDKLKEHIATCMGAREEGQGVDTEVQPVKEENEEKGSLIGDEEEPEENEFESEEENSGDSSSDKSNDSDNSSSNSNTDSSSDDDDNSDGTDEEDDEEEEEDDEDMEDKARYEGMSESEEENHDEYLKKQRQQQQREIENRYEQTPHKEPMLVNYSDDEGPPALSPMLPVAIKAPPSDEHESQDDDELGGSRARTISDSLSKKDKSDESGDDSSEPEQEEEDSDEDDEEDTIRRQAQVVDPNSAFHADNTSRSSNEVEDEQEEGEEQEVEEEQELEEIEHDQEQEQEQEQEQEEEDEEVLHVEQEVQEVEEEEDENVDHGIDGTELVEVDENDMHNLNGTVLMLANDADGNQILIERNMADLENDDSVHDMAQYVFQDGTGFALEDYEAIVESQADEDDEEHQTYAMEIGDVQEEVEDQEHVQEEGEEEEQIDSREQIEEEVEEEEVIANEEEEEDEHSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01465616;
90% Identity
iTF_01469079;
80% Identity
-