Ttub005687.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- Zfy1
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010000027.1:21801064-21807244[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 2.6 5.5e+02 2.8 0.4 1 20 220 239 220 243 0.77 2 26 2.9e-06 0.00061 21.6 2.9 1 23 249 272 249 272 0.96 3 26 0.23 49 6.1 3.0 1 23 278 301 278 301 0.92 4 26 6.2e-05 0.013 17.4 0.7 1 23 307 329 307 329 0.98 5 26 0.0046 0.98 11.5 1.8 1 23 334 356 334 356 0.97 6 26 0.0011 0.24 13.4 0.4 1 23 362 384 362 384 0.97 7 26 0.00016 0.033 16.1 0.1 1 23 388 410 388 410 0.98 8 26 3.1e-06 0.00065 21.5 1.1 1 23 416 438 416 438 0.98 9 26 0.00048 0.1 14.6 0.6 1 23 444 467 444 467 0.98 10 26 1.6 3.4e+02 3.5 1.5 1 23 585 608 585 608 0.95 11 26 2.7e-05 0.0056 18.5 0.5 2 23 615 637 614 637 0.95 12 26 7.2 1.5e+03 1.4 2.5 2 23 648 670 647 670 0.88 13 26 0.0031 0.64 12.1 0.2 1 23 708 730 708 730 0.98 14 26 0.015 3.1 9.9 1.3 1 20 740 759 740 762 0.94 15 26 9.8e-05 0.02 16.8 2.9 1 23 769 791 769 791 0.99 16 26 0.00029 0.061 15.3 0.1 1 23 797 819 797 819 0.96 17 26 0.0001 0.021 16.7 0.1 1 23 825 848 825 848 0.97 18 26 0.00021 0.044 15.7 0.6 1 23 1035 1058 1035 1058 0.97 19 26 0.0026 0.55 12.3 2.4 1 23 1064 1086 1064 1086 0.93 20 26 0.057 12 8.1 3.2 3 23 1097 1118 1095 1118 0.94 21 26 0.003 0.62 12.1 1.8 1 23 1124 1146 1124 1146 0.92 22 26 6.4e-05 0.013 17.4 0.6 1 23 1151 1174 1151 1174 0.96 23 26 0.0022 0.46 12.5 1.5 1 23 1180 1202 1180 1202 0.98 24 26 0.013 2.7 10.1 2.4 3 23 1208 1229 1207 1229 0.98 25 26 0.19 39 6.5 4.0 1 23 1235 1257 1235 1257 0.96 26 26 5.6e-05 0.012 17.5 1.6 1 23 1263 1286 1263 1286 0.97
Sequence Information
- Coding Sequence
- ATGCTGTCTTTATTTGTTGTTGAGAAAGAAGATGTTTGTACAGAGTGTAGCACGACGAAGACCAAAAAATACGAGGAGAATTTGATAGTCGTCAGAGTACAGGAGGCAGATGGGGTGCAAGCTAAAGAACAAATGGTAATTCCGAATCGGGAGCCCGTGAAGGAAGTAACAGAACAGTTGCCATTGGCGCTTATGCTTCAACAGACACAGTGCTCGGAGTCGTTCGTGCTTCTCGTACAACAACCACAAGGTTTGGTAGTGGTACAACCACAGCAGTCGCAATTGATACTGACCCAGATACAGGTATCGGGAGACTGCGTGAAGGTGGAACTGAAGAAGCAGTCGAAGAGCTCGGCATCAACTGAGGTGACACAGCAGTCGCAGCAGGAACTGAAAGTCGAAGCACGAATGCGAAATGTTGCTGTGGGACCGTATGACTCGGATCCTGAGATTACAGAAATGATGGTTCCCGATCCAGCAATAAAGACGGACGAAATTCTTGATGAGGAAGTTAAAACAGCGGTAGAGGAATCAATTGATCTTTTTGACTCCTCATTGAAATTGCCTTCTCCCGTGTTGGCAGAAAACAGCGATTCCGATACCCAAATCCAAGAGCTGGGTGTAAGCGAGCCCTATACAAAGCTCGACCAGAAAAACTATCGCTGCAACATCTGTCAAGTCGTTTGTAACGGCCAGAACGGCATTCTCGGCCACATCTATGGACAGCACAGCCACTTGCGACTTTTCAAATGCACCATTTGCGACAAGACCTTCAAACGCAAACAATCCCTCCAGTTGCATACACAATTGACCCACCTCTACACTGAATACTACCAGTGCGATAAATGCGATTACAAAACAACCAATTCAGCGGCGATGCGTTGCCATCAGTATCGCGTCCATTCGAATGAGTACCGCTTTACCTGTGACATTTGTGACCGTAAGTACAAGAGCAAGCTCGAACTGTCTAATCACATCGTCACGCATTCCGGTGCCAAGTTCATGTGTGACATCTGTGGCAAGCTTTATCGCGGCGAGCACCTAATGAAGACCCATCGGAGATTGCACTTGAATGTCTTTCAGTATCAGTGCCTGGTGTGCAAGAAGAGGTTGGCGACGGCAGAGAGCCTCGAGAAACACAGTAAGCTACATAATCGCAAATTCGAATGCGACATTTGTGGTGTGGAATTCTTGAGCAAACAGAATCTTATAAAACATCAGAATGTACACACGAAGGATATGTCTCACAAGTGTCGTCAGTGTGGTAGAGTCTTCGCCGATGTTAGTACATTGAAGGTGCATATGTTAACGCATGCTGGGGTCAAGCCTTATGAATGCAATGTCTGTGGTATGCAATTCAGTCAGAGAACGCCAATGATGTCGCACTGGAGGCGAAAGCATCCAAGTGAGACAGTACCACCGCCGCCAGTGCGACTCAAAGATGTGATTAAGAACATCGAGttaccATTAACACAATCACCTCAACATTACAGTAACTCACTATCATCCATCGACCCAATATCAGATGACGACATACCTCTTTCGTATCGCCTAGAGCAGTTACGTGAATCCACCATTAAACAAGAAAACTTGGACGACGACGATTCTTGCGCACCATCGCCACCGCCGACCAAAAGACATAAACGGCGCAGTTCACCTATAAAGCCATCCATCAAAGTCGAATGCGACGACAAGGAAGACCACGAAGATCTGATCTCTAAATGGGAGCTCTACTACAAGGTCCGCTACTTGTATTACTGCACTTTCTGCAAAAGCTCCACCGATAAGAAAGCTCTGATAATCCGTCACCTGTTCCGCGAGCATGCGCGGTTCCCCGGCCTCGAGTGTCCGCATTGCGAAGAGACATATGCTAACAATGACGCGCTGAAGAAACACGTGAGACAGCAGCACAGCGACCTTATGGAGGTGGAGGTGATGGTAAAATGCACGGAGTGCAGCTATCAGTGCACGAACGACGAGCTGCTGAAGTTTCACGTGCTGAGAAAGCACGCAGGGCGCTATAGACACGTCTGCGACTGTTGCGGCAATTGTTTCAAAACGCGGAAGGCAAGATATGAACACGAGATGAGGACGGCGAATGATAAAGGACCGAAGCCTAAATACTCCTGCCACAAGTGTCAAGCCGTGGCATCTACGGAGGCAGAGCTGGCGATACACCAGAATTCCCACAATAACGTGGACGGTATCGGCGAACTCTATCCTTGTCAGCACTGTGACCTCGTCTTCTGCGAGGATAAGCTTCTGCGTGCGCACATACCTCAACATGAACGCGATGGCAGCGGTTACACTTGCTCAGTATGCTCGAAACGAATCTCAACCCGCGAGCATCTGCGCAAACACGAGCGTGTACACACAGGCGAGAAGCCGTACGCATGTCCTGAGTGCGGACGTACCTTTGCTCTTCAGAACACGATGAAGGTCCATGCGCTTTCGCATAAAGGCATTAAGCCGTACGTATGCGATTTATGTGACATTGCGTACTCCCAGAGATCGGCGCTTATGATACATTGGAAGAGAAAGCACGCAGATTTACCACCGCCACCGCCTGTTGATATCAGTCGGTTCTTCGATTGCCGCGGCAGAGTTCTAGATAATCCCTGTGAGAAGATCTTCCCGGCTCGCTGGTCACGAAAGCACAGCATCATCTCCAGGATACGAGTGCGCACAGCCCTGGAGCTCGCGGATGAAAACATTAtcaacgagagagaaaaaccaCAGTTACAGCAGAATAAAAAACCGAGTCCgatagaggaagaggaggaagaggaggaggaagaagaagttATGCCGAAGAAACGAGGTAGACCGCCCAAACGGAAACGCGGTAGACCGCGCAAGAATCCACTTCCGATGCCATCGTTGTTAAAGGAAAACGTTGGagtggaaaaagaaaagaaaacggcAGTAAGTGTAAAAGTACCtgcgaagaaaagaaaatttgaaggATACGAAATCGACGAAGTACTTGAAAAAGAAGATGagaaacaaaagaaacaagaaaagaAAGTGAAGCAAGAGAAGGTAGAGAAGGTGAAGAAACCTGTAAAGCCACGAATGTATAAGGAAAAGACGGACGGTCGTTTTGTTTGCAAGATCTGCAATAAGTACTACGATGATCGTAGCAAAGTCAGTGCTCATATAAGAATAAAACACACAATACGCGGAATGTATAAGTGCGAAACATGCAACAAagaatatcaaaacaaaacccAGCTAACTATACACTCATATCAACACCTTGAGAACAGCTCCGACTATTTGATCTGCTGCGACAAGTGCGAGTACCGAGCGAAATCCAAGTACTATCTCAAGACGCACTTGATACGCAAGCATTCAGAGGAGTACAACTATGAGTGCGATTACTGTCAGAAGCGTTTCAAGATAAAATCCGATCTAAAGTTTCATGTAGGCAGGCATAACATCCCGGATCATATGTGCGATGCCTGCGGTCGTATGTATCCCAGTCAAGACTCATTGAACAAGCATCGGCGGGTTGTGCACGttaatgaatacaaatttcGCTGTTCGGTTTGCAAACAGAAGCTAATGACACAAGAGAATCTCGACAGTCACATGAAGCAGCATATGCAAATGCACGGCTGCGACGAGTGCGATCTCAAGTTCATCAAAAAGCATTACGTTACCCGGCACAAAAAGCGGGTGCACAGGATTGATAAGAGACATCATTGTCCAGTCTGCAGTAAGGCTTTCGTTTGTATGGCTACACTTAGGGTGCATTATCTCACACACGCCAAGGTCAAGCCATATATGTGCAACGTATGCGGATTCACTTTTACGCAGCGTTCGTCTATGATGCTGCACTGGAAGCGCAAACATCCTGATGCCGGAGATCCACCACCACCGGTTATACTCACTAATTTCTTCGACGCCATACAGTCAGAGGTGAACAGAATGGCTATGCCAGTGCTCCAACCGCCACCCGAGGATGCTGCTGCTGATACCACTTCGGCCACTAgtacttctactactactactcctactattactactactacgattgctgctgctactactgctgctgctactgttacaACTGCTATTACTATGACTGGTGCTGtctag
- Protein Sequence
- MLSLFVVEKEDVCTECSTTKTKKYEENLIVVRVQEADGVQAKEQMVIPNREPVKEVTEQLPLALMLQQTQCSESFVLLVQQPQGLVVVQPQQSQLILTQIQVSGDCVKVELKKQSKSSASTEVTQQSQQELKVEARMRNVAVGPYDSDPEITEMMVPDPAIKTDEILDEEVKTAVEESIDLFDSSLKLPSPVLAENSDSDTQIQELGVSEPYTKLDQKNYRCNICQVVCNGQNGILGHIYGQHSHLRLFKCTICDKTFKRKQSLQLHTQLTHLYTEYYQCDKCDYKTTNSAAMRCHQYRVHSNEYRFTCDICDRKYKSKLELSNHIVTHSGAKFMCDICGKLYRGEHLMKTHRRLHLNVFQYQCLVCKKRLATAESLEKHSKLHNRKFECDICGVEFLSKQNLIKHQNVHTKDMSHKCRQCGRVFADVSTLKVHMLTHAGVKPYECNVCGMQFSQRTPMMSHWRRKHPSETVPPPPVRLKDVIKNIELPLTQSPQHYSNSLSSIDPISDDDIPLSYRLEQLRESTIKQENLDDDDSCAPSPPPTKRHKRRSSPIKPSIKVECDDKEDHEDLISKWELYYKVRYLYYCTFCKSSTDKKALIIRHLFREHARFPGLECPHCEETYANNDALKKHVRQQHSDLMEVEVMVKCTECSYQCTNDELLKFHVLRKHAGRYRHVCDCCGNCFKTRKARYEHEMRTANDKGPKPKYSCHKCQAVASTEAELAIHQNSHNNVDGIGELYPCQHCDLVFCEDKLLRAHIPQHERDGSGYTCSVCSKRISTREHLRKHERVHTGEKPYACPECGRTFALQNTMKVHALSHKGIKPYVCDLCDIAYSQRSALMIHWKRKHADLPPPPPVDISRFFDCRGRVLDNPCEKIFPARWSRKHSIISRIRVRTALELADENIINEREKPQLQQNKKPSPIEEEEEEEEEEEVMPKKRGRPPKRKRGRPRKNPLPMPSLLKENVGVEKEKKTAVSVKVPAKKRKFEGYEIDEVLEKEDEKQKKQEKKVKQEKVEKVKKPVKPRMYKEKTDGRFVCKICNKYYDDRSKVSAHIRIKHTIRGMYKCETCNKEYQNKTQLTIHSYQHLENSSDYLICCDKCEYRAKSKYYLKTHLIRKHSEEYNYECDYCQKRFKIKSDLKFHVGRHNIPDHMCDACGRMYPSQDSLNKHRRVVHVNEYKFRCSVCKQKLMTQENLDSHMKQHMQMHGCDECDLKFIKKHYVTRHKKRVHRIDKRHHCPVCSKAFVCMATLRVHYLTHAKVKPYMCNVCGFTFTQRSSMMLHWKRKHPDAGDPPPPVILTNFFDAIQSEVNRMAMPVLQPPPEDAAADTTSATSTSTTTTPTITTTTIAAATTAAATVTTAITMTGAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -