Basic Information

Insect: Torymus tubicola
Gene Symbol: -
Assembly: GCA_035583055.1
Location: JAWWEQ010029428.1:9770-14675[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00019 0.04 15.9 1.9 1 23 359 381 359 381 0.98

2 18 0.1 22 7.2 1.3 2 23 423 444 423 444 0.94

3 18 0.061 13 8.0 0.2 2 23 495 516 494 516 0.96

4 18 1.8e-05 0.0038 19.1 1.6 2 23 570 591 569 591 0.97

5 18 3e-05 0.0064 18.4 2.5 1 23 596 618 596 618 0.96

6 18 0.00065 0.14 14.2 0.8 1 21 625 645 625 649 0.92

7 18 0.004 0.85 11.7 1.9 2 23 732 753 731 753 0.95

8 18 5.4e-05 0.011 17.6 3.9 1 23 807 829 807 829 0.97

9 18 0.00031 0.065 15.2 0.7 1 20 834 853 834 855 0.94

10 18 0.053 11 8.2 0.3 2 23 866 887 866 887 0.97

11 18 1.4e-05 0.003 19.4 0.7 2 23 925 946 924 946 0.97

12 18 2.8e-05 0.006 18.5 1.6 1 23 951 973 951 973 0.95

13 18 1.2e-05 0.0025 19.6 1.8 1 23 979 1001 979 1001 0.98

14 18 5e-06 0.0011 20.8 0.4 1 23 1017 1039 1017 1039 0.95

15 18 4.1e-07 8.6e-05 24.3 0.6 1 23 1045 1067 1045 1067 0.99

16 18 4.5e-05 0.0094 17.8 0.2 1 23 1073 1095 1073 1095 0.97

17 18 0.00016 0.035 16.1 4.1 1 23 1101 1123 1101 1123 0.96

18 18 0.012 2.4 10.2 0.4 1 20 1129 1148 1129 1150 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00019	0.04	15.9	1.9	1	23	359	381	359	381	0.98
2	18	0.1	22	7.2	1.3	2	23	423	444	423	444	0.94
3	18	0.061	13	8.0	0.2	2	23	495	516	494	516	0.96
4	18	1.8e-05	0.0038	19.1	1.6	2	23	570	591	569	591	0.97
5	18	3e-05	0.0064	18.4	2.5	1	23	596	618	596	618	0.96
6	18	0.00065	0.14	14.2	0.8	1	21	625	645	625	649	0.92
7	18	0.004	0.85	11.7	1.9	2	23	732	753	731	753	0.95
8	18	5.4e-05	0.011	17.6	3.9	1	23	807	829	807	829	0.97
9	18	0.00031	0.065	15.2	0.7	1	20	834	853	834	855	0.94
10	18	0.053	11	8.2	0.3	2	23	866	887	866	887	0.97
11	18	1.4e-05	0.003	19.4	0.7	2	23	925	946	924	946	0.97
12	18	2.8e-05	0.006	18.5	1.6	1	23	951	973	951	973	0.95
13	18	1.2e-05	0.0025	19.6	1.8	1	23	979	1001	979	1001	0.98
14	18	5e-06	0.0011	20.8	0.4	1	23	1017	1039	1017	1039	0.95
15	18	4.1e-07	8.6e-05	24.3	0.6	1	23	1045	1067	1045	1067	0.99
16	18	4.5e-05	0.0094	17.8	0.2	1	23	1073	1095	1073	1095	0.97
17	18	0.00016	0.035	16.1	4.1	1	23	1101	1123	1101	1123	0.96
18	18	0.012	2.4	10.2	0.4	1	20	1129	1148	1129	1150	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTTGAGGTGGTGGTGAACAACTCCGCGGCTCAGGAGGAGCTCGTCGTCTGTCGCGTCTGCCTGGGACACGAGCATGCGATGCGGGGGCTCTTTCAAGAGAATGAGAGACAAGGAGATGTCGGCATCGTCGGCAGCGCTGCTGAAAAGGCTATGAGCCTCGCCAGTGTTAAGaTGATGCCAGGAGATGGACTGCCTTCTTATATATGCTGCGTATGCAGCAATAATCTGGAATTAGCATACAAATTCAAATTGCAAGTTGAACAAGCTGATAGTGTTTTGCGAGAAAGACTAAAATCTTTGGATGTAAAGCaagagttattttttaatgatttggaTGTAAATTTAACGTCTCATAGGAATAATGTTGAGGAAATATCAGAAGAAAGTTTACTTCTCAAAGATCACATGGATCTGCTAAATGTACAGAAAATAAGTCATAATGATTTGTACAGTGATAATATAGAAAAAGCAACAAGCACTATCATTGATCAAGAAGTGATAgaagagaaaaatgatattcatGAGAATCAACAACTAATTCAACATGAAGAGCAATTGCAAATGCAAGAAATTCATAATGACCACCAAATTCAAATCCAGAATAGTCAAGAAATTCATCATATAACTCATGACCAACATAATCAATCATTCGGAGCTGAACTTCAGGAAATGATacaagaaattaataaacagGAAGCATTGCAAGAATTGCATCAAAGTCAACAATTGACAATGCATGAGCACAATTATGTGGCAGAATCACAATCATGTGTAGTTCCCACTGAACATGATATATTAAATTCAGaggaaaaagaaaaaattgacaaagTAGAAATTAAAGAAGATTGTAAAGAAGACGTTCAACCGGACTTAATTGATGACCAAATAGAAATGAGTGGAATACAGACATCCTCTCCTAATGAATCACTACGGAGAAGCAAACGTAAGCTTAATCAACAAAAGTCTCAAAATGAACGAGATTCCgatcaagaaaattattttgaaactcTAAACCTTAGTTCTCGATTAAAAAAGACACAATCAGAtacattagaaaaaatatattttgtgtgCTACTTATGTGACAAACAATTTGTATCAAAAGATGTTTTAAAAGAGCATATGCATTCACATGAAGAAGTAAGAAAAACTCTTTCTCTTGTGAAAAGATCTCCAGAGAAACTACTCAAGACACCAGAAAAGTCACAAACTGAAATCACAAGCCCAAGAACACCATCAAGTGGTAAAAAGTTAAATACTTGCCCTCATTGCGGTAAAGAATATCTTTACATAATTTCCTACAACAAGCATCTGAAGCAACATGAGAAAGAGAAGGTGATGGatgtgaaaatggaaaatatgcCTCTGGAAGTCTCTTTTCAGGAGGAAGATGATACTTTGGACTTCCATGCTTATGATAACACTGCAATAGATTCCGATGTCGAAGaagacataaaaaataaaaatattctgaaatgTAATGTTTGTGAAGAAGAATTCGACGCTATAGATAAACTTCGGGATCATCGTTCCAAACACGTTGTTGAAGGTGTTATTACAGAACAGGATCTTAACGACGATGGCGAACAAACAAATACTAAAGtaaCCGTCGCCGAATTCGAAAACGTAACAGCCGAAGTAGCGCCAACTGAATTATCCGTCAAACAAGACAGTAGTATCACCTCCAGCAAGGAATTAAAGTGCCCGCAATGTTCACTCACCTTCAACCATAAGAAAGCTTTAATCCGGCACATCGAAACTCACAACAGCGCTAAATATACCTGTAAAGTTTGCCATCAGACATTCATTCGTAAGGAGCTGCTACGCAGACATGCAGAACAGCACGGAAGTCGACTGAAGAGCTTTAAGTGTACACAATGTAACAAGACCTTCGGCAATGAATTGACGCTGAGGAATCATTTGATAGCAACGAACCATAAGACGACAGTGCACGGGCAAGAGTATGACCCAAATAAGAGAATTAAGAGGGTCGCTGCAAAGGCTGCGCAGAAAATCATCGATCAGATTAAGACGGATTTCAATCTTGATGAGACAGACGACGAGAATGCGGATAAGGAAAAAGAATTTGACGATTCGAAGGAGGAGCTCAATGCAGTTGATGAAGAACAAACGGAATATGTGCCACCAATACCTAAAAAACTCCAACGAAGTCAGAGGAGCTTGACCTGTGCGACTTGTAACGTCAAATGCTCATCCAAGCAAGCTCTCACAAAACATATGGAACTGCATGTAAAAGACGAAAACtcaataaaacaagaaaaaccacaacaacagcaacaacagaaGAAGCTCGAAGAAGCGCGCGAGATGGAGGAACGTAACGAGGAGGAGCAACACgaagacgatgacgacgactTCGAGAGTGGTCTTGACTGGCCGATGGACAGTCATGAGTGTCCTACTTGTAAGAAAAAGTACAGCACGAAAAAATCGCTGCTGAGACATCAGCTGCTCCACGAGGAGCCGAACTTTGAGTGTGACATCTGCAATGTGAAGTTCTACAGAAAGGATAAATTGAAGGCGCATTATGATAAGTGTTCTGAAAAAAATCCAGACCAAGTGCGCAAGTGTAATATTTGTGGAGACACGTTTGAGAACAACGAGATATTGAAGGAGCATAGAGCGAAGCACGTGATGGAAGGTATTCTGACGGAAGAGGATCTGCGAGAAATTGATCCCAGGCCGGAGGACAAAAATGGGGAAAAGGCTCCACGGAAAAGGCGAACTGATATTGTGGGATTGGAGTGCACAGAATGTAACAAGCGATACACTTCTAGGAAAGGATTGTTGAGGCACATAcagGTACACGAAGGCAAAAAGTACCTCTGCGACATCTGCCCGAAGAAGTTCTACCGTCGCGAGCACCTCAAGATCCACGTAGCGAAGCACAACATGGTCAAGCCCTACAAGTGTCCACGCTGCACAAAGCGCTTCATTCGTGAGGACCAACTAAACAGCCACCTCACGAAGCACGACAAAACCTTCAAAAAGGCGAAGGAGACTGACACGGCAAAACGCTTCTTATGCGAAATTTGCTCGAAGAGCTTCACTCAGTCGACGACGCTGATAGCTCATTTGAGAGCGCACAATGGTATCAAGCCTTACGTCTGCGAGGTCTGCTCACGGCCCTTCACCACCAACGCCTACCTCAAGATGCATATGCGCACACACACCCAGGAGCGACCGTACATTTGTCAGTATTGCTCGAGAGCGTTCGCCAGGGCTGATACGTTGGCGAATCATCTAACCTCCCATACGGGCGAGGCGAAGTACCATTGTAAATACTGCCCGAAGAATTTTAGGCGACTCAAATCACTCAAGGAGCACGTGTTCATTCACACGGGTCAGCGACCTTACGCCTGCCCTACGTGCGATAGAAGATTTAATAACAACGGCAGCCGATATGCCCACAGCAAGCGATGCAAACAGAACATGTTGCAGAGCAGGCAGcaaaaccaacaacaacagcaagagCAGCAACAAAATTTTCCCATGGAGCAGGAACTCGAGGGACAACAAGAACTCCACGAGCAAGAACAAcaagagcagcagcaggaggagcAACAGGTACAGCAGCTACAACTGCAAGAGCAGCACGATTTGCAGAGGCTGCAGCAAGCGCAGATTATCAAACCTCAGAGTATTAAGACCATTACGATCACGAGGCCTGATGGTACAGCCATTGGCCAACAGCATGTAATGTCTCATCAAGAGATACTTATGCCCCTCATCCTCCCGCTTACGGTTACGCTTGCCGACGTCGGTGAGGAGGTCATTCTGCCTGAGGGCACAAAGATTTTTACAGCGTAA
Protein Sequence: MDAVEVVVNNSAAQEELVVCRVCLGHEHAMRGLFQENERQGDVGIVGSAAEKAMSLASVKMMPGDGLPSYICCVCSNNLELAYKFKLQVEQADSVLRERLKSLDVKQELFFNDLDVNLTSHRNNVEEISEESLLLKDHMDLLNVQKISHNDLYSDNIEKATSTIIDQEVIEEKNDIHENQQLIQHEEQLQMQEIHNDHQIQIQNSQEIHHITHDQHNQSFGAELQEMIQEINKQEALQELHQSQQLTMHEHNYVAESQSCVVPTEHDILNSEEKEKIDKVEIKEDCKEDVQPDLIDDQIEMSGIQTSSPNESLRRSKRKLNQQKSQNERDSDQENYFETLNLSSRLKKTQSDTLEKIYFVCYLCDKQFVSKDVLKEHMHSHEEVRKTLSLVKRSPEKLLKTPEKSQTEITSPRTPSSGKKLNTCPHCGKEYLYIISYNKHLKQHEKEKVMDVKMENMPLEVSFQEEDDTLDFHAYDNTAIDSDVEEDIKNKNILKCNVCEEEFDAIDKLRDHRSKHVVEGVITEQDLNDDGEQTNTKVTVAEFENVTAEVAPTELSVKQDSSITSSKELKCPQCSLTFNHKKALIRHIETHNSAKYTCKVCHQTFIRKELLRRHAEQHGSRLKSFKCTQCNKTFGNELTLRNHLIATNHKTTVHGQEYDPNKRIKRVAAKAAQKIIDQIKTDFNLDETDDENADKEKEFDDSKEELNAVDEEQTEYVPPIPKKLQRSQRSLTCATCNVKCSSKQALTKHMELHVKDENSIKQEKPQQQQQQKKLEEAREMEERNEEEQHEDDDDDFESGLDWPMDSHECPTCKKKYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDTFENNEILKEHRAKHVMEGILTEEDLREIDPRPEDKNGEKAPRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMVKPYKCPRCTKRFIREDQLNSHLTKHDKTFKKAKETDTAKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQSRQQNQQQQQEQQQNFPMEQELEGQQELHEQEQQEQQQEEQQVQQLQLQEQHDLQRLQQAQIIKPQSIKTITITRPDGTAIGQQHVMSHQEILMPLILPLTVTLADVGEEVILPEGTKIFTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01465608;
90% Identity: iTF_01469076;
80% Identity: -