Ttub036572.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus tubicola
Gene Symbol
-
Assembly
GCA_035583055.1
Location
JAWWEQ010034614.1:4749-13566[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.036 7.5 8.7 0.4 2 23 209 231 208 231 0.91
2 28 0.008 1.7 10.8 1.7 1 23 243 266 243 266 0.97
3 28 0.0097 2 10.5 3.7 1 23 280 303 280 303 0.94
4 28 0.00035 0.073 15.0 5.8 1 23 309 331 309 332 0.95
5 28 0.26 54 6.0 0.3 2 23 338 360 337 360 0.94
6 28 0.0068 1.4 11.0 0.2 1 23 365 388 365 388 0.96
7 28 7.7e-07 0.00016 23.4 0.4 2 23 395 416 394 416 0.96
8 28 2.5e-06 0.00052 21.8 0.4 1 23 422 444 422 444 0.97
9 28 8.5e-05 0.018 17.0 1.0 1 23 450 472 450 472 0.98
10 28 0.042 8.7 8.5 0.3 3 23 624 644 623 644 0.97
11 28 0.00095 0.2 13.7 5.0 1 23 646 669 646 669 0.94
12 28 7.5 1.6e+03 1.4 2.9 1 23 675 698 675 698 0.90
13 28 0.00014 0.029 16.3 0.5 1 23 704 727 704 727 0.95
14 28 0.0007 0.15 14.1 0.5 2 23 734 756 734 756 0.93
15 28 0.0063 1.3 11.1 0.2 1 23 761 783 761 783 0.93
16 28 2.7e-07 5.6e-05 24.8 0.3 2 23 790 811 790 811 0.97
17 28 0.00036 0.075 15.0 2.9 1 23 817 839 817 839 0.98
18 28 1e-06 0.00021 23.0 0.2 1 23 845 867 845 867 0.98
19 28 0.0074 1.6 10.9 1.9 1 23 926 949 926 949 0.96
20 28 9.2e-05 0.019 16.9 0.1 2 23 956 977 955 977 0.97
21 28 1.3e-05 0.0028 19.5 3.7 1 23 983 1005 983 1005 0.98
22 28 0.51 1.1e+02 5.1 2.1 1 23 1011 1033 1011 1033 0.94
23 28 2.7e-05 0.0057 18.5 4.4 1 23 1040 1063 1040 1063 0.97
24 28 6.7e-07 0.00014 23.6 0.7 2 23 1075 1097 1074 1097 0.94
25 28 0.00021 0.044 15.7 0.3 3 23 1109 1129 1108 1129 0.98
26 28 3.1e-08 6.5e-06 27.8 0.3 2 23 1136 1157 1136 1157 0.97
27 28 8.4e-06 0.0018 20.1 0.6 1 23 1163 1185 1163 1185 0.96
28 28 5e-05 0.01 17.7 0.0 1 21 1191 1211 1191 1212 0.94

Sequence Information

Coding Sequence
ATGCGTAAATGGCAGATTCTCGAGTTCGACGGCAAACCCTACTACGCCTTTGTCCCGGAAGACGAGGAGCCGGTTAAGATGGAAGATCTACCCGAATATCCAGACGACGTGAGCTTTGTATATGAAGATCCACAGCAGGTCCCAAGCGGGGATGAGGCAGATCAGGAAGCGTCTGAAACTGTAGAACCAGAAGCTGAGCAGAGCACAGTGATTGCCAACGTGGAGGATGAGGATGAGTATTACGAAGTGATCGAGGATGAACCCCAAGAAGCTACAGACGTCAAACCAATAATTATCAACGGCAAAGTAGAAAGTCAACTAATGAGCGAATCCCAGTCCAGTCAATCAGTGCCAAACTTAACTGAGATCGAGCAGGCCAATAGCTACGACGAGTTCTATCAGGTGAAGGTCGAAGGCGGTGTGGTCCTGATCGAGAAAGTCGACGACAGCCAGCTATCATCCACTGAGGCGACAGTCAGCGTGGTGCCGCATTCAAAGGACGACACAGACGAAAACACCTTCGCCGACGATTCTCAGGACGTCACGGGCTTTGAGAACGAAGACGAACCCGCCGAGGTGATAATCGAGGAGGTCGTGCCCGACGAGAAAACCACCGGCCCGCTAAAGTGCAAGGCCTGCTCCGAGACGTTCGAGTCGAAAATAGCCTTCAGGAAGCACGTCGCCTGGACGCACAAGCGCAAGGTATGCCTTCAGGAGAACGGCGAGTTTATCTGCTCGGTGTGCGATTTTCGTACCAGCAAGAAGAGCCTGTTCGCCAGCCATCTGCAGCGCAAACACGAGACCTGGTCGCGCAAGCGTCAAAGTAGCGCGACAATGTTTCCCTGCGCTGTATGTGGTTTTGTCTGCCGTAGTAAGCACTCACTGCAGTCGCACTTCATTCGCAAGCATACGGACAGATACGAGCATCAGTGCAAATTCTGCCCGAAGAAGTTCAAGGTGAAAGGCGACCTGACGAATCACGTGCGATTCCATCACAAAGAGAAACCTGTCAGCTGCGATGTCTGCGGTAAGCTCTGCCTCAACAGTGGCTCCCTCTACGTGCACCAGAAGTGGGCGCACTTCAAGCCCAAATTCGAGTGTCCGATTTGCAAGAGGCGAATGGTGACACAGGAGAACCTCGACGAGCACGTGCTCAAGCAGCACGAGAAACGGGAGAAGATCGTGTGCGCCGAGTGTGGCAAGACCTTCACCAAGAAGGACTCGTTCAAGCGCCACATGGCCGTGCACTCGGGTAGCAAGCCTTACAACTGCGTCATCTGTAATAAACCGTTTGCACGTAGATCGCAATTGCGCCAGCATCTGCTCATACACACGGGCAAGCGGCCGTTTGTCTGCGACATATGCGGCAAAGCGTTTACACAGAAACCCGGCTTGATTTGTCACAGGAAGACGCATCCTGGACCTCATCCGCCGCTACCCGTCATGCCTATTGGAGATATTGTTAAGGAGTTTACCGAAGGGTACCTCGCCGGGAATATGAATGAAGCGAAGAAGAGAACTGTGCCgcaggaggaagaggaggaggaagacgaCGATGAAGCAAGAGAGGAAGAATACGGCGACGAAGAGATTGAGGAAGAAGTGATCGAGGAAGAATTGCTGGAGGAAGAGACGACGCTGCGCCGCGCCCGCACGAGGAAAGCTCTTGATGTATCGCCACCAAGGCCGAAACCTACGACGCGCGCCGTGAGCAGACGTGCCACTGAGCGATCAACGAAACCAACACGGAAAATCCAAGAGAACCTGGAGCTGAACAACCGCCCCGTGAACGCATCGTCGAAGAAGCTGCGCGTCGATGGGTCAACGCAGACGACGACTATGGGCTTGGTGAAGGTCGAGGTGCTCCTCTGCGACAAGTGCGAGTTGACCTTCCCCGACGGCGACTCGCTCAAGGAACACTCGAAGAACCATACCTATTGTTGCGACCACTGCAACATGTCGTTCCGGCTACGCAAGCAGCTTCGCAAGCATATCTCCGAGGCGCACAAATCTGTACCCCAGTATGTctgcagcgagtgcgagagtATATTTAAATGCCGTCAGTCGTTACGCGAGCATTTCGTGCGCAAACACACCGAAGGCTTTCGCTTCGCCTGCGCTACCTGTGGCAAGAAATTCAAGATGAAGAGCGATCTATACATGCACGTGCAGAGCATACACAGTGACGAGCGTGAGGCTGTATGTGATGTATGCGGTAAAACCTATCGCAATGGCTTCGCCCTCAAGAAGCACCTCGCTCACGCTCACAATCAACGGCCGTTCGCTTGTGAGATTTGCAAGCGTAGACTCGCTACCAAGGAATCACTCGAGCAGCATAATCTACTTCATCTGAGGAAAGAGCGTGCTGTCTGTCAGGTATGCGGTAAGACCTTCAGTGGCAACGACGCTCTCAAGAAACATATGAGGATACACACAGGTGTTAGGCCATTCCCTTGTAAGGTCTGTGGTAAGGCCTTCCGAAGGCAGAATACCCACAAGCAACATCTGCTCACGCATACAGGACAGAGACCATACGTTTGCGACATATGTGGCAAGGCCTTCACCCAGAAACCAGGACTAATCACGCACAGGAAGAAACATCCAGGACCATTGCCACCATTACCAGCGATCTCGATCGATTACGTGATCGCTGATCTGATGGAAAAGACGACTGGGAAGACGACCCATGTAGACGATGCGCTgtCGTCATCCAGCGTCGTCGCCGCTACCACTACCATCGCACTAATACCGTCCACCTCCAAGACTCGTGCTCAGCATACCTGCGACCTATGCCAGACCACATTTCCCCGTTTCGCCGACTTAGTTGGCCATTTACGTCACCTGCACGGTATTGAGCGGCCGGTTGTCTGCGACATCTGCGGTCGCTCATTCCGCAGCCCTTGGAGCGTCGGTCGTCACAAACGTATACACGAGACTGAGAAGCGATTCTCCTGTGAGCTCTGTGATTACTCCTGTAGGCAAAAGTCAAACTTGGAAATACACAGACGCAGACATGAGAAGAACTACATTCATCGATGCGACGTATGCGGCAGTGGTTTCATGCAGAGGACCAAATTCCTTGAGCACAAAACCTTACACGAGGGTCGCGGTGCTAACCATAAGTGCAGAGAATGCGACAAggtatttaattacaaaaggaATCTGGTAGCACACATAAGACTCTGCCATCCGGAGACTTGTAGTTCTGGAGCACCAATGCTCGAATGCCCCTACTGTCCAAAAACATTCTCCACTGAGGTCAATCTCAAGCGTCACCTCAAGTTCAGTCACGCTCGACTTACTGAGCCCTGCGAGAAAGGCCTCTGCGATCTCTGTGGTAAGCAGCTGTCGTCGAAGAAGGCGCTCATACAACACATGCGTGGCCATACAGGTGAAAAGGTCGCCGAGTGCGACATTTGCGGCAAGAGCTTTTCCAAGTGGGATAATCTACGTGTTCATCAGAGGATACATACGGGCGAGAGGCCGTATCTTTGCTCGGTATGTGGCAAAGGCTTCGCTCAAAGGACTACGCTGGTTCATCATATCAGGATACACAACGACGAGAAGAACTTTAAGTGCGAGGAGTGTGGCAAGGCATTCGTTGCCGCGTCGCTGCTTAGGAAGCACGCGAAAATACCAACATACATTAACGTATTCCATATTGCTAACAAAATATCACTCTACCTCTTCTCTTTTCACAGATCCAAGAAGAAAAGTAGAGGCCTAAGGAGGAAAACTCAAGTTCCTAGTCAGAGCAAAGGACAATACAAGGCCTTCTGGGCGGAGTCTCGGGTACAAGCTGGCATTGAGGATTTACGAGCTCAGCGGGCGCCAATAATGGCCATCGCAGCGAAGTACCGCGTAACTGTGACAGCTCTAGTCGACCGCTACAAAGCCACTTACGGCTATCCGCCGGATAAACGACAATGCATACGCGATCCCAAGCAGTACATTATAAACGAGGATTACGATGGCCGGCTAAGAAGATATACAGAAGATCATCGCGCGCGATCGCTCACCTTCACTCGTATGGATTTCCGAAGATTCGCGTACGATATCGCCGAGAGCATGGGCATAGTGACGAGGCACAATTCAGTGTTCGATAAGGAGCGCAAGATCTGTACCACCAAGTTCTTTCGTGACTTCACGGAGAAATACAAGGACGTGATAGCGGCATTACAGACGAGGGACGGTGGATCCCATGGCAAAGAGAAGGAGCGCAAGGTCGAGGAGTTCTACACCGCGTACGAGGAGCTGATACAGACCTTCAAGATAAACCCGAGCAGGATCTATAGCTGTGCCGTGCCTCTGGCACCCGTCGTCTTCTACAAGGAGAAACTGGCGCGGAACATGGCCCTCCTGATTGCTATCAACGCAGCTGGTGATACCGTAGTGCCACCATTATTCGCGTACCCGGAGGGTCAAGCGCCAACTACACTACCACCGGACGCACCGAAAGATAGCCTATTCCGGGTGAATCGTACCGGTATCATCAGTCCCGAGGGCATTCTTGATTGGCTGCGACACCTCGTCGACCGTGCGAAACCCACCGCTCTTGATCCACTGATTCTATTGGTCGATCCACGCACCTATCCGCGCGATCTCGCTCTCGATACCTATACACGCGAGAACCACATTTATCTGTTTGGTATACCTGAGCCTAGTATGGACCCTTTGGAACAGGAGGAGGCGAAACCTTACCGCGAAGCCTACAACAACGCGTGCTGCGCTTGGTTACTCGAGACTAACCTTGTCAACCTGGCGGAAATCATCAAGGACCAGTCGTTCGCGCCCAAAGCGTTTAAGAGCGCCGGACTCTGGATCGTCGAGATAAAGGAGGAGCCAGATGAGAAATTAACACTGGACAATGATATGGAAATGCTGCACAACGAAGATAGATGA
Protein Sequence
MRKWQILEFDGKPYYAFVPEDEEPVKMEDLPEYPDDVSFVYEDPQQVPSGDEADQEASETVEPEAEQSTVIANVEDEDEYYEVIEDEPQEATDVKPIIINGKVESQLMSESQSSQSVPNLTEIEQANSYDEFYQVKVEGGVVLIEKVDDSQLSSTEATVSVVPHSKDDTDENTFADDSQDVTGFENEDEPAEVIIEEVVPDEKTTGPLKCKACSETFESKIAFRKHVAWTHKRKVCLQENGEFICSVCDFRTSKKSLFASHLQRKHETWSRKRQSSATMFPCAVCGFVCRSKHSLQSHFIRKHTDRYEHQCKFCPKKFKVKGDLTNHVRFHHKEKPVSCDVCGKLCLNSGSLYVHQKWAHFKPKFECPICKRRMVTQENLDEHVLKQHEKREKIVCAECGKTFTKKDSFKRHMAVHSGSKPYNCVICNKPFARRSQLRQHLLIHTGKRPFVCDICGKAFTQKPGLICHRKTHPGPHPPLPVMPIGDIVKEFTEGYLAGNMNEAKKRTVPQEEEEEEDDDEAREEEYGDEEIEEEVIEEELLEEETTLRRARTRKALDVSPPRPKPTTRAVSRRATERSTKPTRKIQENLELNNRPVNASSKKLRVDGSTQTTTMGLVKVEVLLCDKCELTFPDGDSLKEHSKNHTYCCDHCNMSFRLRKQLRKHISEAHKSVPQYVCSECESIFKCRQSLREHFVRKHTEGFRFACATCGKKFKMKSDLYMHVQSIHSDEREAVCDVCGKTYRNGFALKKHLAHAHNQRPFACEICKRRLATKESLEQHNLLHLRKERAVCQVCGKTFSGNDALKKHMRIHTGVRPFPCKVCGKAFRRQNTHKQHLLTHTGQRPYVCDICGKAFTQKPGLITHRKKHPGPLPPLPAISIDYVIADLMEKTTGKTTHVDDALSSSSVVAATTTIALIPSTSKTRAQHTCDLCQTTFPRFADLVGHLRHLHGIERPVVCDICGRSFRSPWSVGRHKRIHETEKRFSCELCDYSCRQKSNLEIHRRRHEKNYIHRCDVCGSGFMQRTKFLEHKTLHEGRGANHKCRECDKVFNYKRNLVAHIRLCHPETCSSGAPMLECPYCPKTFSTEVNLKRHLKFSHARLTEPCEKGLCDLCGKQLSSKKALIQHMRGHTGEKVAECDICGKSFSKWDNLRVHQRIHTGERPYLCSVCGKGFAQRTTLVHHIRIHNDEKNFKCEECGKAFVAASLLRKHAKIPTYINVFHIANKISLYLFSFHRSKKKSRGLRRKTQVPSQSKGQYKAFWAESRVQAGIEDLRAQRAPIMAIAAKYRVTVTALVDRYKATYGYPPDKRQCIRDPKQYIINEDYDGRLRRYTEDHRARSLTFTRMDFRRFAYDIAESMGIVTRHNSVFDKERKICTTKFFRDFTEKYKDVIAALQTRDGGSHGKEKERKVEEFYTAYEELIQTFKINPSRIYSCAVPLAPVVFYKEKLARNMALLIAINAAGDTVVPPLFAYPEGQAPTTLPPDAPKDSLFRVNRTGIISPEGILDWLRHLVDRAKPTALDPLILLVDPRTYPRDLALDTYTRENHIYLFGIPEPSMDPLEQEEAKPYREAYNNACCAWLLETNLVNLAEIIKDQSFAPKAFKSAGLWIVEIKEEPDEKLTLDNDMEMLHNEDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-