Ttub030100.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- ttk
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010020083.1:15675-17503[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-10 3.4e-07 31.4 0.0 1 38 341 379 341 383 0.93
Sequence Information
- Coding Sequence
- ATGCAGCCTCAACAGTACTGTCTGCGTTGGAATAACCATAGCTATAACTTCATCAATATGTGCGAAAACTTACTTTCATCAGAAACATTCACAGATGTCACATTGGCAGTTGCCGATGGTGCCACTCTGAAATGTCACAAGGTTGTTCTAGCAGCCTGCTCAACATACTTTGAGGACCTCTTATTGAAGAATCCTCACGATCATCCCTTCTTAATCCTTGGTGATGTTCAGTATTATGAGATGAAGGCTATTCTGGAGTACATGTACAGAGGAGAAGTAAATGTAGCTCAGGACTCTCTTCACAGTTTACTCAGGATAGCAAGTTACCTTAAGGTGAAAGGTTTGGTTGAAGACAAGAGAAGCAGAAACGGCTTGTCAACGATGGCAGAAGTTGCAGAAGCCGCCGTagcagccgccgccgcagcaAATGCCCAATCGACCGAAATCGATCCCTCGGCAACTGTTACCAGCACTGCTCATCTTAACAATGGTTACAACCCTTCAGCAAATCTTACATTGCAACCAACTTCAACGTTCCTGCCGTACGGGAAGACTCCTGTTGACGCTGCTAAACATCTGCCTTTGTGGGCTGCTTTCTCAGGACTTCCTGTTACTCATGTTCCGGTTTCTGGCCAATCACCACCAACAGGTTATCGTTCCTCGTATGAGAATAGCGGGGAATCGTCACCACTCAGCCGAAAGAAGCAAATCATGATGGCATGCCGTGATACACCGATACTCAGGAATGTCCTAGGTGGTGAAGGTACGCCTATGGGACCTGATACAACTTTCGGGTCTACTGGTAGCCCACCCATCTATGATTCGGACAGAAGAAACAGTGGAGAAATGTCGGAGCCGCTATTAGACGAAGAGGACTTGAGGCACCGTAACAACCGTAGGCGCCCATCGCCTCCAAGTTATCGTCCATCTCCGAGTAACAGGTCGAGGGGTGGTAACTTTGGCAAACgaggtggtggtggccaAGGTGGCAAGCCAGAATGGAAGAGATATAAGCAATACACCCGGGATAATATCTGGGACGCAATGCAAGCAGTTAAAAACAAGGAGATGAGTGCTTTGCAAGCGGCACGCAAATTTGGCGTACCGTCGCGCACACTTTACGACAAGCTGAAGAAGGCCGGAATACTACCATCACGCGGTCCTTCAACTCGTCGGGGATCTTCTTCGTCCTCTCAGTGTAGTAGTGCTAAATTCCCGTACCAAGGCGGCGCCAACGGCCACGTGTACGGTGATGGCGCTAGCACATCTCACCTACAAAATTCCGATGAAGAACCAGAGCCGTCAACGTCAACCGCTGGCCAACCAATGCCTGGCTGTAGCAGCGACAGTTCATCCTATATCTACCACACACCAGCAAGCGGTAGTAGCCATGAAGCAGAAGATATCGTCATGGACATGAGCAGACGTAGCCCCAGCTCTGAAGATGAGGTAGAAGATTTATCCGTAAGAAGGTCAAACGATCATGAACCACAAAATCGACAACAACAGCAGGCTACTGATGATGCAGCGATGGACGATACCGCTTATCCGCCTTCTCCTCAACCCTTGCAAGTGGACATAAAAGAGGAAGAATCGGATAACCCTGATGAAGGGATGAACGGTCACGCTTGA
- Protein Sequence
- MQPQQYCLRWNNHSYNFINMCENLLSSETFTDVTLAVADGATLKCHKVVLAACSTYFEDLLLKNPHDHPFLILGDVQYYEMKAILEYMYRGEVNVAQDSLHSLLRIASYLKVKGLVEDKRSRNGLSTMAEVAEAAVAAAAAANAQSTEIDPSATVTSTAHLNNGYNPSANLTLQPTSTFLPYGKTPVDAAKHLPLWAAFSGLPVTHVPVSGQSPPTGYRSSYENSGESSPLSRKKQIMMACRDTPILRNVLGGEGTPMGPDTTFGSTGSPPIYDSDRRNSGEMSEPLLDEEDLRHRNNRRRPSPPSYRPSPSNRSRGGNFGKRGGGGQGGKPEWKRYKQYTRDNIWDAMQAVKNKEMSALQAARKFGVPSRTLYDKLKKAGILPSRGPSTRRGSSSSSQCSSAKFPYQGGANGHVYGDGASTSHLQNSDEEPEPSTSTAGQPMPGCSSDSSSYIYHTPASGSSHEAEDIVMDMSRRSPSSEDEVEDLSVRRSNDHEPQNRQQQQATDDAAMDDTAYPPSPQPLQVDIKEEESDNPDEGMNGHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01469805;
- 90% Identity
- iTF_01469805;
- 80% Identity
- iTF_01469805;