Ttub017274.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- -
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010004470.1:1576-3030[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-11 7.2e-08 33.5 0.0 6 39 25 58 22 60 0.94 2 2 9.7 1.6e+04 -2.8 0.0 17 23 143 149 141 150 0.83
Sequence Information
- Coding Sequence
- atgaaaaaatcaaaagaaaagagaagcaagaagaaagaaaagtgtacaaaaaattatatgcaaaaCAATGTTAAAGAAGCTTTGAATGAAATCAAGAAAGGGATGTCGACTTACGAAGCtgcaagaaattttaatgtgcCTAGAAGTACATTATATGCCAAACATAAGGAAACTATTCGCATAGTTGGAAAACGAGGTCCTAAAACGTACTTAACAGCCGCTGAAGAGAAAATAATCGTCGATTGGATTTTATATAGCTTTGAGCGCGGTTTTCCAGTGACTAAGACTCAGTTCTTGTTATGTGTGCAAAAATTAGTAGGTTTGTTAGGAAGGGAAACTCCTTTTATTGACAACAAGCCAGGTTGTCACTGGTATGAGAGTTTTTGTAAGAGACATCCAGAAATATCAGAACGAGTGGCtcaatatttatctatatctCGAGCTTCTGTTACCTCAGAAAGATTGAGAAAATGTTTTACTGATGTTGGTGAATATTTGAAGAAGAAAGAATTGCTTGATATAGATCCTTCAAGAATTTTTAACCTTGACGAAAGTACTTTCTTCCTAATACTCAAAGGTGATAAATTATTAGCTAGGAGAGGCTCTAAGGCAGTACGGAAAGTGGTACATGGAGATGAGAAAGAAAGTTTAACTGTCTTATTTACAGTAAATGCTCTAGGTATGAAGCTTCCGCCTATGATCCTATATTGGTATGAAAGATTTCCTGCTAATATTATGCAATCATTGCCACCAGGGTGGATAGTGGaGAATACAAATACGTCTATTACTGAAGAAAGCTCTGTTACAGATACTAATCAATCAACATCAAGTTCTCAAGAAAACATGAGGTATCTAGATTTCTTTGAGTCTAATTTACCGACTAATGTATTACAAGATTTAAACAACGCTGTAAATAATGGAAGTTTTCAAGTGTCAAATTCAGATAACAAGGGGTTATTTGACCTCTGGttgaaaatcaaaatgatacctggttaa
- Protein Sequence
- MKKSKEKRSKKKEKCTKNYMQNNVKEALNEIKKGMSTYEAARNFNVPRSTLYAKHKETIRIVGKRGPKTYLTAAEEKIIVDWILYSFERGFPVTKTQFLLCVQKLVGLLGRETPFIDNKPGCHWYESFCKRHPEISERVAQYLSISRASVTSERLRKCFTDVGEYLKKKELLDIDPSRIFNLDESTFFLILKGDKLLARRGSKAVRKVVHGDEKESLTVLFTVNALGMKLPPMILYWYERFPANIMQSLPPGWIVENTNTSITEESSVTDTNQSTSSSQENMRYLDFFESNLPTNVLQDLNNAVNNGSFQVSNSDNKGLFDLWLKIKMIPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -