Ttub033420.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- -
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010027082.1:63770-68949[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-12 9.7e-09 36.3 0.1 7 38 97 127 96 133 0.90
Sequence Information
- Coding Sequence
- ATGTTCACCTCCCAATACGGCTTGTTGAGACATCTGCGCGTCTGTGACTCCAATCGCAGTTTCTCCTGTCCGCTCTGCGAGTACACGAGCAATCGCAAGTGGAACGTCAAATCGCACATCGAACGTGTGCACGTGAAAATGACTGGCATGAAGAAAAGCTCGGCTACGGGAGGAACGATGAAGGCATCGCATAAGGCTGATAggCACGTAGTCTGGTTGCAGATGGACACGACTACAAGTCCGAGACGTGGTCGTCGATCGAAATACATGAAATCTGACGTCAAACTGGCAGCGCTCAATGCTCTTAATAACGGCATGTCATTGCGCAAAGCTGCAGAGATATACGGCATTGCCAAGTCCACATTGCAACGGCTCAAGTGCCAGCATCATCAGTACCATACAGTGTGGCCTCACCCAGATCTGACGGCAATTACACCACCATTacaacaacaaccacaacaTCAGCTActaccatcatcatcaccgcCACTGCTACCAACATTACCACAACTTACGTCCGACAGCTCGACATGCAGGTTCGAGTGTCAGACCTGCGGGAGGTGTTACAAAATGCGTGTCAGCCTGATTCGCCACTTGCGCTACGAATGCGGCGGGCGCAAAAGTTTTGGCTGTCACCTCTGCCCTGGAAAATTCACGCAAAGCGGCACGTTGAGACAGCATCTGCAGAAGATGCACAATGTGTATCTACCGCCACAGAAGAGATATTCTCATAACCGTGTAATCGATCTACTTCCACGACTAATCTCACATCTTGACGTTTCTTTTCCAGATTACTACGATCCGTACGTCTACCAGCCCGTTCCGACACTCGTTCCAACTCTCGTCTCGACGCTCGTCCAAGTACCAACTCAGCTTGGTAACGATTTGGCTGCAGCTACgaccgctgctgctgttactacatCTCCGTCGGCTTACCAATGTCCAAATTGTGGCAAGGTATACTCGATGAAGAACAATCTGCAGCGCCACGTCAAGTTCGAGTGCGACGGTGAACGGCGCTTTTGGTGCAATCTCTGTCCTAACAAGTACACGCAGAATGCTAGTCTACATAGGCATCTTCTGCATCATCATAACATCGACGTCAGAGAGATTGCAAGGGCTAAAAGAAAGGTCAAAAGAAAATAG
- Protein Sequence
- MFTSQYGLLRHLRVCDSNRSFSCPLCEYTSNRKWNVKSHIERVHVKMTGMKKSSATGGTMKASHKADRHVVWLQMDTTTSPRRGRRSKYMKSDVKLAALNALNNGMSLRKAAEIYGIAKSTLQRLKCQHHQYHTVWPHPDLTAITPPLQQQPQHQLLPSSSPPLLPTLPQLTSDSSTCRFECQTCGRCYKMRVSLIRHLRYECGGRKSFGCHLCPGKFTQSGTLRQHLQKMHNVYLPPQKRYSHNRVIDLLPRLISHLDVSFPDYYDPYVYQPVPTLVPTLVSTLVQVPTQLGNDLAAATTAAAVTTSPSAYQCPNCGKVYSMKNNLQRHVKFECDGERRFWCNLCPNKYTQNASLHRHLLHHHNIDVREIARAKRKVKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470018;
- 90% Identity
- iTF_01470018;
- 80% Identity
- iTF_01470018;