Basic Information

Gene Symbol
ARID5B
Assembly
GCA_035583055.1
Location
JAWWEQ010000001.1:17731507-17741714[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.3e-25 4.1e-21 76.7 0.0 1 89 259 345 259 345 0.95
2 2 0.5 3.3e+03 0.1 0.0 24 53 1120 1152 1106 1182 0.69

Sequence Information

Coding Sequence
ATGGATGAAGTACTGACGATCTCAGAGAAGGTGGTAGTGCGTGTGCACGACCTCGTCACCTGGCTCTCGCCGTCCCTCGAGTGGTCATGGGGTCGTGAGATCTCCTACCCGTCGACGCCCTCCTCGTCACCCGAGAGCAGTCCCCATCCGCAGGTACTCTCGGACCCGGGTCTTGACTTCTCGGACGTCGAGCGCCACCAAAAGGATCTCGAAGCTCTGTACACCCGTCGCGGCATTAGCATCGTCGACACGCAAAACGGCTACGAGAGCCAGACGAAGGTCGTAGTACTATCGTACCCAAGGTACTGCCGCTATCGGGCGCTCTTGAGGCGACTCGACGGCTCCGAGCCAAACTGGGTGTGCTCCTCGATTGCTGCGGCACTTGGTGGTTTCACTGCCCTGCCCGGCACCAGAGTTCTCTTCTGCAGGGATACCTTTGATTATCCGGACCTCGAGACGCACGAGTTGCTGTGTAATCATTTAGCGCCAAAACTAAAAGGACGGCCTCGGAGGAAGCGCAAAAAGCGCAGCGTGTCACCGGGTGAATCGAGTAACGAGAGTGAAGCCTCGGTCGCCTCCTCGGCAGCGGCCTCCACGTCCAAGGGCTCGAGCTCGAGCAACAATGGCAATGGTAATAACGCCAACAATGGTCAATCGACGACAGGTCCAAGCGGTACACCCGGACGACCGCCTGGTGCCTCGTCGTCTTCGTCCTCTAGTTCGAGCTCGTCGACGTCGTCTTTAGCGCGGCGAAGCGACCGTAAAGTCACCGCCGAGGAGAAGAAGTTCGTTAGCGAAGTCTACAGCTTCATGACGACACGCAACACGCCGCTCGGAAAAATGCCCCTGCTTGGATACAGACAGAttgaTCTATTCCTGTTTTACACAAAAGTTCAAGATTTAGGAGGATATGACAAAGTTAGTGCAAATCGACTTTGGAAATCAATCTATGATGAGATGGGTGGTAATACAGGTTCAACAAGTGCTGCAACTATAACAAGAAGGCACTACGAAAGgtTATTACTACCTTATGAAAGATGTCAGAAAGGTGAAGATTCCAAAATTAAGCTAAATCATGGTAATAGACGTATCAAAACACCTAGTATATCAGATGTATCAGAGGATTCCACTGAAATAAAGCGGGAAGCAGATAGTCCCACACCATCAGAAACTCCTACTGAGGCAACTAATAATAACAATTCTACGACAATTACACCTCCTTTACAGTCAATTCTTGCAGCTACGCCATTCCTGCCAGGAGACAAACCTCGCTCGGAAAGCGGCAAGACATCGTCATTGCGCAGCGTGAGGGTGAAGCCCGAGCGTTTAAAGTCCTTGAATACAATAATCGCGACCAGCAACTCAGCGCCTGCCAATCAGCAACAACTGCCCACCTCACCGACCTCCTTGCTGACGGCGTCGAACAATACGACGTCGTCATCTGCGACTTCCTCGCCCACGGGCACCCCACCCGCTTCGACCACGCCAACGAACGCCAATCAGCATTCTGTGCTTGAGAGGCAACTCAATAGTCCTTTAATATCACAACAGGTACCACCATCGTGTTCACCGCCTGGATTGCCTGTGAGCACAGTGGTAACAAACGCCACAACAGTGGTAACGCTGACTCCTCCACCCGAAAAAGACATGAAGGAGATCAAGCTTGATTCAAAGCAAACAAGTCTGTTAGCTCAGGGTAAGGAAAACATTCCCGTATTCGAGGAGAAAAGCCCGATATACGTGGACAAGCCTCGTTCGCCCGAGGTTATAGACCTAGAAACGGAGAACGAGTCTGGTACCAGGGACAAGCTTATCATTCCGAGCTTCAAGAAGCGAAAACTGGAGATACTGCGCGAGGGTGGTCTCGAAGTTACTGCTGTTGATTTAGATGCTCGACCGAGCGTGATCCAGCCCACGACAACGACCGCAACGACGACACCCGCTTCGTCTTTGCCAGCctcaacaacgacaacgactaTGTCCTCCTCGTCTTCGACCCAGTCCTCACCGGCTTCGTCGCCACAAGTGACCTCGATGATCCACAATTCATCGCCTGAGAAGCCCAAATCCGAGGGCTCACCCAACTCCTCCCCAGTATCGTCTGCCATGTCGATCCCTAAACTGATCAACGTGACTGTCACTCCAGACATTAGCCATATGCTACCACGTGCCGCTTCCGAGGAAAGAGGTCATCTTCCAGTATCACCTGTACGGCCACAAGTTACTGGCGGTTCCAGCCTGACTCCGCGACTGCAGCCGCAACCGTGGGCCGTAATGGATCCCAGCTATGGTATCGCACCCGCGAGTCAAGCTCTGCCGACGAATAGCCGTGTTATCAATCTTGGCAGCTCCAATCCATCCTCGTTGATACAATTGTACGCGAATGCCAACGTACCCATGCCGAGATCGGTGAACATGGCTGCTGCGCAACAACAACACGCGATGCAACATCAGATTCCGACACATATACCGCAACAGCCTCAGGCTTCGAGCAGATTAGTTCAGTCATCGCCCATCGTTGCAACTGAGAGCAGGTTACCAGTTACGCCGCACAGGGTCACCCAATCGAGATCGATTTTTGGCACCGATGGCAGCACAACATATGGCGATCCGAACGATATTCTTGAACCTGCTAGAAACGCAGGGATGTTATCGCCACCAGGGTCGCGAAGTAGTAACAGCAGCGGTAACGAAATGTCACCGAACGGAGTTTTGGATCTCACGAAGACGTCCCCGGATCGACCAATGTACGGACGACCGAACCTCGAAATAGTTAGGGTACCGGTCGTGCCTCGACCGAATCCATTAAACTTTGATACGAATCATTTACGTGGTCCACCCGTCGGTATGCCCACCAATCTCAGCAACAAACCGCAGCCGCAGCAacagccgcagcagcaacaatcaccaccacagcagcagcagagcaaaCAAGTAGGCCCGCCAGCAGACATGAGAAATCAGTACATGAGCGGACCTTCTAGCTCCGGCCCTGGTACTTATCCGAACGTGCTCGACAGTCGTACAATGGCCACGAACAATCTTGAAATCACACTCGTCAGTCCGAAGAAGAATAGCAGCGCGGGTATGGTTGACGTGCCACACTCAAGTCCCTCTAGGAgtaatgTACCACTAAATATGCCTGTACAGAGGAGGCCCCCGCCACATCCGCAACAAATGCCGTCACAGCCGCAACCTCCACATccacaacatcaacaacaacagcaacaaaaacACCTCATGAATGGCAAGTTCCCTAACAGACTACCCTCAGAGGCTACATCACCCTATACTCCCAGGAAAGCGTCAAGCTCCAGTAGTATGGGCAATAGTAATAATACGCACCATCCGGTGATACCGAATATACCTAATCTTAGCCACTTAAACGCGGCGGCAAACTATGCTAAAGCAAATCAAATGGGTGGCTATCATCAGATCTCAGgaggagaaaagagaaaagccACTTCTCCGGCGAATTCGAATAGTAAAGAGCAGCGCAGGATAAGTGAAAGTGAGAAAATGAcgatacagcagcagcagagactGTTGGAGGCGTCAACTGCTGCATCGCCATCGAAATCAGCAAGGGATGCCGAGGCGTCACGTAGACACAGTATGCCAACTCTGCCGAGCCTGCCGACGGGTTTTATTCCGGGCGTTCCGGCCAACAGCCCGGCCTTCTTGGCACATCAGATCGCCGCGGCGAGTGGCGGTAATGCAGCAGCGGCGGGCAAATTTTTGCCCATGATCGACCCCTCGATGTATTACTCCTTCTATAACGGCCTCTTCCCAGGGCCCGTGGCACCGAATGCTGCGGCCTCGGCCTTCATCCAACCAGAGTTGAACGCGTATTACAAGGAGTTCCTTGCCAATACATCGGCCCAGCAGATCGCCATGGCTGCAGCGGcccagcagcaacaacagcatcaacatcagcaacagcaacagcagcagcaacaacagcaacagcaccAGCCTCAGCATCAGCCCAGTGGGCCCACGACCAAATAG
Protein Sequence
MDEVLTISEKVVVRVHDLVTWLSPSLEWSWGREISYPSTPSSSPESSPHPQVLSDPGLDFSDVERHQKDLEALYTRRGISIVDTQNGYESQTKVVVLSYPRYCRYRALLRRLDGSEPNWVCSSIAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASSAAASTSKGSSSSNNGNGNNANNGQSTTGPSGTPGRPPGASSSSSSSSSSSTSSLARRSDRKVTAEEKKFVSEVYSFMTTRNTPLGKMPLLGYRQIDLFLFYTKVQDLGGYDKVSANRLWKSIYDEMGGNTGSTSAATITRRHYERLLLPYERCQKGEDSKIKLNHGNRRIKTPSISDVSEDSTEIKREADSPTPSETPTEATNNNNSTTITPPLQSILAATPFLPGDKPRSESGKTSSLRSVRVKPERLKSLNTIIATSNSAPANQQQLPTSPTSLLTASNNTTSSSATSSPTGTPPASTTPTNANQHSVLERQLNSPLISQQVPPSCSPPGLPVSTVVTNATTVVTLTPPPEKDMKEIKLDSKQTSLLAQGKENIPVFEEKSPIYVDKPRSPEVIDLETENESGTRDKLIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQPTTTTATTTPASSLPASTTTTTMSSSSSTQSSPASSPQVTSMIHNSSPEKPKSEGSPNSSPVSSAMSIPKLINVTVTPDISHMLPRAASEERGHLPVSPVRPQVTGGSSLTPRLQPQPWAVMDPSYGIAPASQALPTNSRVINLGSSNPSSLIQLYANANVPMPRSVNMAAAQQQHAMQHQIPTHIPQQPQASSRLVQSSPIVATESRLPVTPHRVTQSRSIFGTDGSTTYGDPNDILEPARNAGMLSPPGSRSSNSSGNEMSPNGVLDLTKTSPDRPMYGRPNLEIVRVPVVPRPNPLNFDTNHLRGPPVGMPTNLSNKPQPQQQPQQQQSPPQQQQSKQVGPPADMRNQYMSGPSSSGPGTYPNVLDSRTMATNNLEITLVSPKKNSSAGMVDVPHSSPSRSNVPLNMPVQRRPPPHPQQMPSQPQPPHPQHQQQQQQKHLMNGKFPNRLPSEATSPYTPRKASSSSSMGNSNNTHHPVIPNIPNLSHLNAAANYAKANQMGGYHQISGGEKRKATSPANSNSKEQRRISESEKMTIQQQQRLLEASTAASPSKSARDAEASRRHSMPTLPSLPTGFIPGVPANSPAFLAHQIAAASGGNAAAAGKFLPMIDPSMYYSFYNGLFPGPVAPNAAASAFIQPELNAYYKEFLANTSAQQIAMAAAAQQQQQHQHQQQQQQQQQQQQHQPQHQPSGPTTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01464822;
90% Identity
-
80% Identity
-