Ttub005084.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- retn
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010000027.1:11661115-11692379[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-26 2e-22 80.9 0.0 2 89 18 103 17 103 0.96 2 2 0.87 5.7e+03 -0.7 0.1 72 87 277 292 239 292 0.61
Sequence Information
- Coding Sequence
- ATGGCTTTCTTTGTTCTGTTGCAGTTGTACGAAATTAACGATGATCCTAAGAGGAAGGAATTTCTGGACGACTTGTTCAGCTTTATGCAGAAAAGAgGGTCACCAATAAACCGACTGCCGATAATGGCGAAATCCGTGTTGGACTTGTACGAGCTGTACAACCTGGTGATCGCACGAGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGCCTTCACCTCCCGTCAAGCATAACCTCTGCCGCGTTTACGCTGCGCACCCAATACATGAAATACCTGTACCCGTACGAATGCGAGAAGAAGCACCTGTCAACTCCAATGGAGCTGCAGGCAGCGATCGACGGCAACCGTCGCGAGGGCCGTCGCAGCAATTACGGCGCCTACGGCGGCGGTGGTCCGGACAGCGCCATGCAGCGCAGCTCCCACACGCCGAGTTCGCTGGCTTCACTCGCGCATCAGATGTCGCCGCTGTCACTGGTCTCGACCCTGGCTGCGGCAGGCGCGACGGGCGGTGGTCAGCACCAGGTCAATCCTCAGGCTCTGGTGAACGGGAGCGCGGTTCACACGCCGATGCCCCATCATCCCCATCATCCACAACACCAGCAGCCAGGCCTGGGACAAACGCCTAGCGCTGGCATTTCGCCCGACTTCGAAGCGCGCATGGCCGAGTACGTTAAGCAGCTACACCGGGGTATAAACCCTCAGCATGTTCAACAActtcaacagcagcaacagctccAGCAAGACCGTGGCTCACCTCCATCGCAATCAAATTCGCCTAACCAGCACGACAACGCTCTGTTCGAGATGTCGCGACTGACCCTCTTGAGCAGCATCTACAACAACAATTTGCATCCTAGCTTCGCTGCAGCGGCGGCTGCAGCTAATGTCGCTGGCTACAATCATACGGCCTTATCGCCAAGGCCGCCATCCCACTCGCCACAGCAACAGTCGGCTACACCCGAGCCCCAGAAAGAAGCTCTTGATTTGGGCATGCGCTCGTCGCCAAGCTCCTCGTCACCACCACGCCAGAGCCCGCCGTCATCATCCGGCGGTAGCGTACGCATCAAACGCGAAATGGACGCTCCTTCGACAAGCAATTCTGCTGCTAAGAGGATGTGCGTGGAGGAaacggaggaggaggaggaggaggtgccAGAAGAGCGCGCCCCACCGGCTTTGACCAACAGACACATTAGGATTACTAGCAGAGGAGATGGCCGCGACAACTCCTTGCTGTTCAGCGTGGAGCTCAACGGCGTCGTGTACGAGGGCGTCCTATTTCCTCAGACTGACAACAGGAACGGCAACGTTTCGACAAACAACAACGAGCCTAAGACTCCGTCGCGCAACGTCATCTCGTGA
- Protein Sequence
- MAFFVLLQLYEINDDPKRKEFLDDLFSFMQKRGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSTPMELQAAIDGNRREGRRSNYGAYGGGGPDSAMQRSSHTPSSLASLAHQMSPLSLVSTLAAAGATGGGQHQVNPQALVNGSAVHTPMPHHPHHPQHQQPGLGQTPSAGISPDFEARMAEYVKQLHRGINPQHVQQLQQQQQLQQDRGSPPSQSNSPNQHDNALFEMSRLTLLSSIYNNNLHPSFAAAAAAANVAGYNHTALSPRPPSHSPQQQSATPEPQKEALDLGMRSSPSSSSPPRQSPPSSSGGSVRIKREMDAPSTSNSAAKRMCVEETEEEEEEVPEERAPPALTNRHIRITSRGDGRDNSLLFSVELNGVVYEGVLFPQTDNRNGNVSTNNNEPKTPSRNVIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01465970;
- 90% Identity
- -
- 80% Identity
- -