Ttex001433.1
Basic Information
- Insect
- Torymus texanus
- Gene Symbol
- nfxl1
- Assembly
- GCA_036873485.1
- Location
- JAYJLV010000002.1:775802-778530[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.1 3.9e+04 -3.2 1.1 15 19 123 127 122 127 0.81 2 20 0.81 2.9e+04 -2.9 0.2 4 10 158 164 158 164 0.87 3 20 1.2e-08 0.00043 22.2 16.7 1 19 172 189 172 189 0.99 4 20 1.4e-07 0.0051 18.8 13.0 4 19 228 243 226 243 0.94 5 20 1.2 4.4e+04 -3.4 3.4 5 18 267 278 267 279 0.77 6 20 0.014 5e+02 2.8 16.9 1 19 278 297 272 297 0.90 7 20 0.0002 7.2 8.7 10.7 1 18 333 350 333 351 0.97 8 20 0.012 4.2e+02 3.0 8.0 1 12 385 396 385 396 0.94 9 20 1.2 4.4e+04 -3.4 1.7 6 10 406 410 406 410 0.97 10 20 2.6e-07 0.0094 17.9 15.8 1 19 416 434 416 434 0.93 11 20 0.00011 4 9.5 7.6 9 19 482 492 480 492 0.90 12 20 0.00015 5.5 9.0 6.6 1 12 502 512 502 512 0.95 13 20 0.86 3.1e+04 -2.9 5.8 14 18 543 547 543 548 0.89 14 20 1.6 5.8e+04 -3.8 0.6 9 12 565 568 565 568 0.77 15 20 0.00023 8.5 8.5 6.7 1 12 584 595 578 595 0.91 16 20 0.78 2.8e+04 -2.8 1.7 6 10 611 615 610 615 0.88 17 20 0.0043 1.6e+02 4.4 16.1 4 19 625 640 623 640 0.91 18 20 1.8 6.4e+04 -3.9 1.7 9 13 646 650 644 650 0.73 19 20 4.5e-05 1.6 10.7 11.6 1 18 685 704 685 705 0.88 20 20 0.93 3.4e+04 -3.0 0.9 6 10 735 739 734 739 0.89
Sequence Information
- Coding Sequence
- ATGAGAAAATTCAGAAGAGCTCAAGCACAAAATCAAGCTTCAATTGAGAAACACTTAGTGGCAAACAATGTTGAGTCTTCTAACAGTGaggatgaaaatgaagaagtaTTAGAAACAGCAGTTGAGAAAGTATTGTCAACTTATCAACGCGAAGGTGGGGATGTCAATAAGACTTCGTCTTATTTAACTGAAACTTTACAATCTGGAGGGGCTGTTTGCTTAATATGTATTTCTACAGTAAAGAAAACTGATGctATTTGGAGCTGTGTTGaatgttatacatttttacatttacctTGTATTCAGCACTGGGTGCGAGATAGCTTAAGTTATAAACATGAAAAGGGAATTACACCTTTATGGGCTTGtccaAAGTGCAGATCAGAATATGGAGAAGATCAAATACCACGAAAGTATGTATGCTTTTGTGGAAAAACTGAGGATCCTCCTTATCAACCTTGGAGTATTCCTCACTCTTGTGGAGATATGTGTGGAAAGTTTTTACAACCAAAATGTGGGCACAAATGTATGCTTTTATGCCATCCTGGTCCTTGCCCTCCTTGCCCAAAAATGGTATCAATTACCTGTTACTGTGGAAAACAAGTACCTTGTCCTCGTAGATGCAATGCTAAAGAATGGAGCTGTGGTAAGGtgtgcaataaaaaatatacaacatgtGATCATAAATGTATGGAAAAGTGTCATTCCGGTGCTTGTCCACCCTGTTCAGAAATGATTTTAACTGCATGTAATTGCAAGAATAAATGTGAAGTAAGAAAATGTAATGAAGCATTTTGGCGATGTGATAAGACTTGTGGAAGATGCTTTTCATGTAACGTACATGTTTGTGAAGACAGGTGTCACAAACCAGGAGATTGTAGTACATGTCCACTAGAGCGTAATAGAACCTGTCCATGTGGTAAGAAAAAATATGCCATATCTTGTAAGCAACAGCAAGCTCCAACATGTGGAGATACTTGTGGAAAATTGTTAGAATGTGGAGCTCATAATTGTAATATGAGATGTCATACAGAACGTTGTGGACAATGTTTAGAAGTTGTGACAAAAACATGTCGTTGTGGAAGTTTTAGTAAAGAACTTGCTTGCATTAAAGAATtccattgtaataaaaaatgcacaCAAATGAGACTTTGTGGCAAACACTTATGCAACAAAAAATGTTGCGATTGTTTAGTGAAAAATACCTTTAATGTATGTGAAAAAGTTTGCGAGAATACATTAAATTGTCGCAAGCATAAGTGTCCTGCACCTTGCCATAGTGGACCTTGTTATCCTTGTCCACGTACCATCGTTATTCAATGTCGTTGtggtaaaagtaaaattactgTCCCTTGTGGAACAGATAAGAAAATAAAGCCGCCACAttgtaataaaatgtgtaaaattcTACCTATTTGTCATCATCCCAAAAGAGAATCGCACAAGTGTCATCAAGGTGCTTGTCCACCATGCCGTAAAGTATGTGGATTGACACATAAAAGATGTGGTCATACCTGTCCAGCATTATGTCATACCAAAGTGTGGACTAAATTTAAACCAAACGGAGTTGCAAAACCAATTGGGCCTTGggaaaatcaaaaagaaaggTGGGAGTACAAATCTTTTCCATGTCCTCCTTGTGAAGTTTCAGTAATGGTTACTTGTCTTGGAGAACATGAAACACGTCCATGGCCTTGTCATAAGGCTATTTCCAGTTCTTGTCTTAGAGAATGTGGTCAATTATTAACATGCACAAATCATTATTGTGAAAAACTTTGTCATAAATTACAATCACCAGAGgatgataatgatgaaaataaatgcaTAGAATGTGAAAAGCCTTGTGTTTTCCCAAGACCAAAAGGATGCACACATATTTGTCCAAAACCTTGTCATCCAGCTCCATGTAATCCATGCAAACAATTAGTAAAAGTTCCATGTCATTGTGGAATTAATACTCTTTACATTCGCTGTGCTCAGCTTACTTCTGCTACTGTTGAGCagaaaaatgaacttttacaaTGTGGAAATCAATGCCCTCGAAATtaTGCTTGTGGTCATCGTTGTATAGATAACTGTCATCCTGGACTTTGTAAAAAAGGTGAATCTTGCAGTAAAAAGGTAAAAGTTTTATGTAAATGcaaaaggataaaaaaagatttttcatgtCTATCCATACGAGCTGGAAAAGCTATTGTAGAATGTGACGAAGTATGTCggaaaaagaaggaagagtTGGATCGAATTAAAGAGCTTGAACAGgagaaaaaacgaaaagaagaaGAGCTGAAGAATcagaaagaaattgaaatgtttgaaaagaaatttaagccaaaaagaagaggaaaagatCGTCATCATAATAAAGAGCAGTCAGATGATAATGGTAATTCCTATAAATGGATATGGATAATTGCTGTATTTATTATTGGAGTTTCTGCTGCAATAGTATTAACTTTTCAAACAAATCCAAACTCAATTTATCATGGGTAA
- Protein Sequence
- MRKFRRAQAQNQASIEKHLVANNVESSNSEDENEEVLETAVEKVLSTYQREGGDVNKTSSYLTETLQSGGAVCLICISTVKKTDAIWSCVECYTFLHLPCIQHWVRDSLSYKHEKGITPLWACPKCRSEYGEDQIPRKYVCFCGKTEDPPYQPWSIPHSCGDMCGKFLQPKCGHKCMLLCHPGPCPPCPKMVSITCYCGKQVPCPRRCNAKEWSCGKVCNKKYTTCDHKCMEKCHSGACPPCSEMILTACNCKNKCEVRKCNEAFWRCDKTCGRCFSCNVHVCEDRCHKPGDCSTCPLERNRTCPCGKKKYAISCKQQQAPTCGDTCGKLLECGAHNCNMRCHTERCGQCLEVVTKTCRCGSFSKELACIKEFHCNKKCTQMRLCGKHLCNKKCCDCLVKNTFNVCEKVCENTLNCRKHKCPAPCHSGPCYPCPRTIVIQCRCGKSKITVPCGTDKKIKPPHCNKMCKILPICHHPKRESHKCHQGACPPCRKVCGLTHKRCGHTCPALCHTKVWTKFKPNGVAKPIGPWENQKERWEYKSFPCPPCEVSVMVTCLGEHETRPWPCHKAISSSCLRECGQLLTCTNHYCEKLCHKLQSPEDDNDENKCIECEKPCVFPRPKGCTHICPKPCHPAPCNPCKQLVKVPCHCGINTLYIRCAQLTSATVEQKNELLQCGNQCPRNYACGHRCIDNCHPGLCKKGESCSKKVKVLCKCKRIKKDFSCLSIRAGKAIVECDEVCRKKKEELDRIKELEQEKKRKEEELKNQKEIEMFEKKFKPKRRGKDRHHNKEQSDDNGNSYKWIWIIAVFIIGVSAAIVLTFQTNPNSIYHG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470178;
- 90% Identity
- iTF_01466799;
- 80% Identity
- -