Basic Information

Gene Symbol
zfh2
Assembly
GCA_036873485.1
Location
JAYJLV010000035.1:36468-60129[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.17 46 6.7 0.1 2 23 206 228 205 228 0.91
2 9 0.00023 0.061 15.7 1.8 2 23 444 466 443 466 0.95
3 9 5.8e-05 0.015 17.6 0.7 1 23 498 522 498 522 0.92
4 9 0.097 26 7.5 0.3 1 22 578 599 578 602 0.91
5 9 0.68 1.8e+02 4.8 1.5 1 23 868 892 868 892 0.91
6 9 0.00014 0.038 16.4 2.5 1 23 1458 1480 1458 1480 0.99
7 9 0.0027 0.7 12.4 0.4 1 23 1565 1587 1565 1587 0.98
8 9 0.0061 1.6 11.3 0.3 2 23 1729 1751 1728 1751 0.96
9 9 0.4 1e+02 5.5 0.4 2 22 2025 2045 2025 2048 0.89

Sequence Information

Coding Sequence
ATGAGCCCGGAGGAAGAGAGTGGCCGAGGGGGCGGGTCCCCACCGGCTGCTGGGGCTGCATTACACCAACCTCATTATCCTGTTACTGCTAGTCCAGCCTCCGGTACAGAACCCTGTATACGCGATTCAATTTCTACACCTATTTCTGCCGCAGATACTACTACAAATACATCAGATACTTTCGTACTTTCAACAACTTTGCAACAACATAATATTAGTCCGAGTCCAAGTCCAACAAGAGATGTGGAAAAATTTGACGGAAAAATTGTCTACAATCCAGATGGATCAGCGTATATCATTGAAGGTGAAAGCGAATTAAGTGATGATGATTCTTTACCAGATGGCTGTATTGTTGATGGGCGTGGTGTGTCAATTTCTCACTCATTAGTGCTCCCGCAAATCGCAAATGCTTATTATGTTTCAAGATTCTATGCACATCAAATGTATCAAAGTCAACAGCAGAAGTCATCAACTATACCTTCAAATCCTGAACTGCCGGTAATGCACAGCTATCGAGTGATTAGTTATCGCAGTTCTGAAGGAAGTGCGCAATCATTAGTAAGTACGCAAGCGCCAACATTGCCGGCTGCATCTGTTCCCGTAAAGCCTATTCTAATGTGCTTTATTTGTAAGCTTAGTTTTGGTTATGCCAAAAGTTTTATAGCTCATGCTCAAGGTGAACATCAATTAACATTAATGGATGACGAGAGACAAATTCTAGCCCACTCAACAACATCCGCAATAATTCAAGCTGTTGGGAGAAATAAACAGGCAATTGTAAGTTTTCTAGAACCGGTTTCAACATCAACGTGTTCTCAAGATTCTTTAGAACAAATTTCGTTGCAACATTCACGAAATAatgatgatattataaataaggatttattgaataaaacgaatgtaaaatcaaatatttctaatgcGATGAGTAATGTACATAATTTACAACAGAAACCTGTAGTTAGCAATTCTAATGCAACTACATCAATTAATCAAAACGTTCTATACAACCACCAACAACATAATCAATGGATTAATACTCAAGTTAGTTCGTCATCATGGTCCAAGCCAATCGAAAGTTCTACAAACAACTATACCTCATCAACGCCACCAATACAAATAAAGTCTTCACAAGTATATACAAATCTAACACAACAGCCGCCAAATTTTTTAAGTGGTACTACTATAGGTGTTTGCCCTGAACACATACAAGGTCGTCCTAGTGGTATTGAATGTTCGaaatgtgaaataatattagcAAGTAGTCGTTTATCAGCAGCAAGTGGGTCAATAACGGGAATTCACAGCAGAAATTCATGTAAAACTCTTAAATGTCCAAAATGTAATTGGCATTATAAATATCAGGAAACTTTAGAAATTCATATGAAAGAAAAGCACCCCGACAGTGAAACATCATGCATTTATTGTATTGCTGGGCAGCCGCATCCAAGACTTGCAAGAGGCGAAACATATACATGTGGTTATAAACCATACAGGTGTGAAGTTTgtaattattcaacaacaacaaaGGGTAACTTAAGTATTCATATGCAAAGCGATAAACATTTGAATAATATGCAGGAACTACAACAAAGTGGTAATAATTCTAATTCAAATAATCCTTCGTCATCTCAAGATAGCTCTATATCAAATAGAAGCCCTCACCATCAACAAAATCATAGTCCACTGTTAAGTGGTCAATCGCCAAATCAAGGAAAACCAAAAAGTACATTCCGTTGTGAAGCTTGTAATTATGAAACTAATGTTGCACGCAATCTTAGAATACATATGACAAGTGAAAAACATACACACCATATGTTAGTATTACAACAAAACCTGAAACATATACAAACATTATCTGTACTTCAGTCACATCAGCAAACTCAACAAAATCAGATGCACCAACAACAGCTTGAGCAATTTCTTCATCTtagtaattttgataaaccTCAGCATGCGGAAGCCGCCTTAGCTGATATGGCTTATAATCAAGCTCTTCTAATACAAATGATGACAGGAGGTCAATTACCTTCTCATATTCCGACAGAGATCATTGGCGGAATCAGTAATATAAATGCTTTAACTAACATTGGATCTGATATTGGTTTATCGCCAGAAAGTATGGAACCACCTCCAGAACCATCAGATCCAGATCCATCACATCTTTATCAATGTTgtgtttgtaataatttttctactgaTTCTATTGAAGGTCTTGGAAGTCACTTGGCTTCAGATAGAACAAAAACACGGGAGGGCGAAATTCTTAGTACTGTTGCGGGACATTTTATCTGCAAATTATGTTcctataaaactaatttaaaagcCAATTTCCAGTTGCACTGTAAAACTGATAAACATTTACAAAGACTACAACACGTTAATCATGTTAAAGAAGGCGGATCTCGTAATGAGTGGAAATTGAAATACCTCTCCTCCCCAACGAGTACAGCACAAATACGTTGTCACGCTTGCGATTATTATACAAATAGTGTTCATAAACTAGCTCTTCACGCAGCTTCTCCTAGGCATGAAGCAGCTGCTCTTTTACTTCGTCATTTATTAGAGGctagtacaaatattttatcttcaTCGAAATTGTATCATTGTGCACTATGTGGGTTCAGTACAAAAAATAGATTACCATTATTGCAACATGTACGATCTCGTAGACACCTTCAAATGGAGCAATTACATCAATTACACAGAAGAACAGGATTACAGACTGGAGAAACTCCACATACTGATATTGGAGATGTTTTTCAAGTAATATGCGACCCAAATGGAGCATCCACCAATTCAAAACCAAAATCTCCAACTGATTTGATAccaaatataacattaaataacgAAGATATTATTGCGGAGAATGAAAAATCGCCTGATGAAGACAGTAACGTTGCTGGTACGAGTGATACAAGTGACGAGGAATACACCCCCTATAATGCTAAGAACGAAAAAGTTCCACTTACACAAGAAAAAGTGAATGATCTCATGCGCGATTTGGGCCTACTAAAAGATGGGGCAGAGTACTTGGCTTCATGGCTGAAACAAAATACTAATGAAGCTGGAAAAGTTAAAGTTTCTTACCACCGAGACAGAGATAAGGAATATCGTGATTATTTCGCTTACGATGAAGAATTTTCCTTAGCGTACTGCAAAGATATAGTTGGGTTGATGAATCGCTTTAAACATGGATGTTACAAACCCAACGAGTGGAGATTGTTCATCGATTCGTCGAAGAGAAGTTTAAAAGCTGTTCTAGTTCACAATACAAATGTTTATGCAGCGATTCCCATAGGATATTCGGTAATACTGGATGAAAAGTACTGTAACATGGAAGCAAATGTTGGAGCGTCACAAAAGCGTGCTAGAACTAGAATCACTGATGATCAGCTTAAAATTCTCAGAGCtcattttgatataaataactCGCCTGGAGAAGACCAAATTATGGATATGGCTGCTCAAAGTGGATTGCCACCCAAAGTAATAAAACATTGGTTCAGAAATACCCTATTCAAAGAGCGCCAACGTAATAAAGATAGCccttacaattttaataacccTCCTAGTACCACTTTGAATTTAGAGGAATATGAGAAAACTGGAGAAGCCAAAGTCATGCCACTTGGATCTACTGCAAGCATACAAATTTCAGATAACAAGAGTGAAAACAAACCGTTACATTCATCAGAATCTCTTATTAGTTCTAACATAACAGTAGACAGAGAAATGAAACACGAATATTCGGAGCAAAACATTGAACAGCCTTGCCATGACGAACATCACTCTCCTGGAAGTTCAGGAGATCAACTATCCAGGCCGCAATCTCCTGTAATATCTTCGATTTTTACAAGTTCTCATCAGGATATAGCAACAATTTCTACAACATTGAATTCTCAAAGTTCACCAATGCTTCCTCCAAAAGTAACTCCTCAAAATTTCCTTAATTCAAATTCCCTTTCAACAAGTACTATACCAAGTAATATGCCAGGACTTTCATTATCTAATCAACGTTGTAATAGTCCTATTAGAGGATCAGAATTCGCatttaatggtaataataatggCAACAACACAGGAAATAATAGTTCAGGAAAGAGAGCAAATAGAACTAGATTTACCGATTATCAAATTAAAGTACTTCaggaatttttcgaaaataatgcATACCCGAAAGATGACGATCTAGAATATTTAAGTAAACTTTTAGGTTTGAGTCCACGTGTTATTGTTGTTTGGTTTCAAAATGCTAGACAAAAAGCGCGTAAAGTATACGAAAATCAACCCCCTTTAGAACCTGTCACATCAGGAGGACGTGAAAATGATGATGGAACAGGTCGATTTCAAAGAACACCAGGTTTAAATtatcaatgtaaaaaatgtcTTCTTGTTTTTCAACGATATTATGAGCTTATTCGTCATCAAAAGACACACTGTTTTAAAGAAGAAGATGCAAAACGTAGTGCTCAAGCCCAAGCTGCTGCCGCTCAAGTGGCTGCTGTCTTAAGTTCAGAAGATAGCAACAGTAGTTCCACTACGACAAATACATTTCAATCAACTTCTATGAATATTCAATCTGCTTCTGAACAATCATCAAATTCGAATACAACTTTTCTTCAACAACCAGTAAGTCAACAACTGCAACCAAATCAGCAGTGTTCTACATCTGAATCGaaggatgaaaattttaaatgtgataaatGTAATCTTGTATTTGGGAGATTTGAATTATGGCGGGAGCATCAATTAGTACATATCATGAATCCCACGCTTTTTCCGCCTACTTATCCACCTGACTCGGCTTTCGGTATTCTTCAACAACAGGCATTAAATAACAGCAGTTCGGCATCAGAAATATCGCATTCTTTAGTTAATGTTGTACaagaacgaaaaagaaaatatgaagatTATGAAGAAAGTCATAATATTGATAGTAAATCGAATCCAGACAACAATGATCAACCAAAAGATAAACGCTTACGCACAACTATTCTTCCAGAACAACTTGATtatctttatcaaaaatatcaagTTGAATCTAATCCTTCACGTAAAATGTTGGAAACTATTGCTAGAGAAGTTGGCTTAAAAAAACGAGTAGTACAAGTTTGGTTTCAGAATACCCGTGCACGAGAACGAAAAGGGCAATTTCGTGCTCACAgtcaagtaataaataaaagatgcCCTTTTTGTCCAGCTCTTTTTAAGGTTAAATCAGCTCTTGAATCTCATTTAAATAGCAAACATACTGATCAAATTGCGCGAGGAGAAATTAATATCGATAATATTCCTGACGAAGAACTGTCATTAGAATCATCACCATCTAATGCCAGCACTCCCAATATGATGCCACCTTTGTTTCCTCCAATGAGTACTGAAGTAGAAGCTTCTCTAAAAAAGTACTATGAAGAATCAATGAAACGCTATATAACAGAACTACAATCACACACAAGTAATGGAAAGCAAGAAGTAAATAGTTCCTTGTTTTCtggtaataataatgaatcacCTTTGGATTTAAGTAAACCCGTTGATTTAAGCAAAACAGTTAAATTGACTATAAATAATGTTGGTAATTTATTAGATGACCAAAATAATGCTCAACAAATTCGTACTGGCAGCGACTGTGGTCAACTTACTGATATATCAGAAAAAAGTGTTTGTGATGATGACAGTATGAGTGAAACAACAGAATTTCTTGATGATGAAAGTAATCCTACTAGTCCAGCATCAAGCTCACAAAGTTCTAAGCAAGGAATAAGTAGCAGTAATATTgggaataatgttattttatgtacTACAAGTAATTCAGTTGTTCAAACAGGAGGAAAAAGATATCGAACGCAAATGTCAACAACACAGGTGAAAGTAATGAAATCTCTATTTTCGGACTATAAGACTCCAACAATGGCAGAATGTGAAATGCTCGGACGAGAAATAGGACTTCCTAAACGAGTGGTTCagGTATGGTTCCAAAATGCACgggctaaagaaaaaaaagcaagatTGGCAGCCGGATTATCAGCAGATGGTGTAGTAGTTCATCGAGGATTAACTGGTCCTGAAGAATGTAAATTATGTTCTGTACGATATTCCCCTAAATCGCCTTTGCAAGAACATATATTTTCACGGAGACATATTGAATCGGTAAGATCTGCCGTCGAAGATGGTAGTTTAGTACCGCCAACTCCTGGAGCTCCTATATTAAGGGAAAGTGCCATTGCAaatcctataaataataatctgcaAGGCAACCAACCGCAGACTGATGAAAATATGATGTACGGGTCTTTGTTCCTTCATCCCACGGCAATGTTtcagtcgcagcagcagcagcaacagcaacattCCGGGAATGTTACAACCAGCACGACTACCACCACAACTGGTGAGTGTCTGGCTGACCTCTTAGATTCCTAA
Protein Sequence
MSPEEESGRGGGSPPAAGAALHQPHYPVTASPASGTEPCIRDSISTPISAADTTTNTSDTFVLSTTLQQHNISPSPSPTRDVEKFDGKIVYNPDGSAYIIEGESELSDDDSLPDGCIVDGRGVSISHSLVLPQIANAYYVSRFYAHQMYQSQQQKSSTIPSNPELPVMHSYRVISYRSSEGSAQSLVSTQAPTLPAASVPVKPILMCFICKLSFGYAKSFIAHAQGEHQLTLMDDERQILAHSTTSAIIQAVGRNKQAIVSFLEPVSTSTCSQDSLEQISLQHSRNNDDIINKDLLNKTNVKSNISNAMSNVHNLQQKPVVSNSNATTSINQNVLYNHQQHNQWINTQVSSSSWSKPIESSTNNYTSSTPPIQIKSSQVYTNLTQQPPNFLSGTTIGVCPEHIQGRPSGIECSKCEIILASSRLSAASGSITGIHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPDSETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQQSGNNSNSNNPSSSQDSSISNRSPHHQQNHSPLLSGQSPNQGKPKSTFRCEACNYETNVARNLRIHMTSEKHTHHMLVLQQNLKHIQTLSVLQSHQQTQQNQMHQQQLEQFLHLSNFDKPQHAEAALADMAYNQALLIQMMTGGQLPSHIPTEIIGGISNINALTNIGSDIGLSPESMEPPPEPSDPDPSHLYQCCVCNNFSTDSIEGLGSHLASDRTKTREGEILSTVAGHFICKLCSYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGSRNEWKLKYLSSPTSTAQIRCHACDYYTNSVHKLALHAASPRHEAAALLLRHLLEASTNILSSSKLYHCALCGFSTKNRLPLLQHVRSRRHLQMEQLHQLHRRTGLQTGETPHTDIGDVFQVICDPNGASTNSKPKSPTDLIPNITLNNEDIIAENEKSPDEDSNVAGTSDTSDEEYTPYNAKNEKVPLTQEKVNDLMRDLGLLKDGAEYLASWLKQNTNEAGKVKVSYHRDRDKEYRDYFAYDEEFSLAYCKDIVGLMNRFKHGCYKPNEWRLFIDSSKRSLKAVLVHNTNVYAAIPIGYSVILDEKYCNMEANVGASQKRARTRITDDQLKILRAHFDINNSPGEDQIMDMAAQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVMPLGSTASIQISDNKSENKPLHSSESLISSNITVDREMKHEYSEQNIEQPCHDEHHSPGSSGDQLSRPQSPVISSIFTSSHQDIATISTTLNSQSSPMLPPKVTPQNFLNSNSLSTSTIPSNMPGLSLSNQRCNSPIRGSEFAFNGNNNGNNTGNNSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIVVWFQNARQKARKVYENQPPLEPVTSGGRENDDGTGRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQVAAVLSSEDSNSSSTTTNTFQSTSMNIQSASEQSSNSNTTFLQQPVSQQLQPNQQCSTSESKDENFKCDKCNLVFGRFELWREHQLVHIMNPTLFPPTYPPDSAFGILQQQALNNSSSASEISHSLVNVVQERKRKYEDYEESHNIDSKSNPDNNDQPKDKRLRTTILPEQLDYLYQKYQVESNPSRKMLETIAREVGLKKRVVQVWFQNTRARERKGQFRAHSQVINKRCPFCPALFKVKSALESHLNSKHTDQIARGEINIDNIPDEELSLESSPSNASTPNMMPPLFPPMSTEVEASLKKYYEESMKRYITELQSHTSNGKQEVNSSLFSGNNNESPLDLSKPVDLSKTVKLTINNVGNLLDDQNNAQQIRTGSDCGQLTDISEKSVCDDDSMSETTEFLDDESNPTSPASSSQSSKQGISSSNIGNNVILCTTSNSVVQTGGKRYRTQMSTTQVKVMKSLFSDYKTPTMAECEMLGREIGLPKRVVQVWFQNARAKEKKARLAAGLSADGVVVHRGLTGPEECKLCSVRYSPKSPLQEHIFSRRHIESVRSAVEDGSLVPPTPGAPILRESAIANPINNNLQGNQPQTDENMMYGSLFLHPTAMFQSQQQQQQQHSGNVTTSTTTTTTGECLADLLDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01468652;
90% Identity
iTF_01468652;
80% Identity
iTF_01468652;