Basic Information

Insect: Torymus texanus
Gene Symbol: RREB1
Assembly: GCA_036873485.1
Location: JAYJLV010000001.1:17963295-17969411[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0062 1.6 11.2 0.3 1 23 42 64 42 64 0.96

2 16 0.00039 0.1 15.0 0.1 1 23 79 101 79 101 0.97

3 16 2.2e-06 0.00058 22.1 4.5 1 23 107 130 107 131 0.97

4 16 0.093 24 7.5 0.2 1 23 228 252 228 252 0.95

5 16 0.11 29 7.3 1.0 2 23 258 280 257 280 0.92

6 16 1.1 2.9e+02 4.2 0.5 1 19 338 356 338 358 0.91

7 16 0.08 21 7.7 0.1 1 23 472 494 472 494 0.96

8 16 3e-05 0.0079 18.5 0.3 1 23 503 525 503 525 0.98

9 16 0.0015 0.39 13.2 2.8 1 23 531 554 531 554 0.97

10 16 0.0015 0.38 13.2 2.2 1 23 951 974 951 974 0.97

11 16 0.00086 0.22 13.9 0.1 3 23 1255 1275 1253 1275 0.97

12 16 1.1 2.9e+02 4.2 6.5 1 23 1281 1304 1281 1304 0.97

13 16 0.0049 1.3 11.5 2.2 1 23 1353 1377 1353 1377 0.97

14 16 1.3 3.4e+02 3.9 2.6 1 23 1504 1527 1504 1527 0.93

15 16 0.018 4.8 9.7 0.4 3 23 1576 1596 1574 1596 0.93

16 16 0.00032 0.084 15.3 4.6 1 23 1602 1624 1602 1624 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0062	1.6	11.2	0.3	1	23	42	64	42	64	0.96
2	16	0.00039	0.1	15.0	0.1	1	23	79	101	79	101	0.97
3	16	2.2e-06	0.00058	22.1	4.5	1	23	107	130	107	131	0.97
4	16	0.093	24	7.5	0.2	1	23	228	252	228	252	0.95
5	16	0.11	29	7.3	1.0	2	23	258	280	257	280	0.92
6	16	1.1	2.9e+02	4.2	0.5	1	19	338	356	338	358	0.91
7	16	0.08	21	7.7	0.1	1	23	472	494	472	494	0.96
8	16	3e-05	0.0079	18.5	0.3	1	23	503	525	503	525	0.98
9	16	0.0015	0.39	13.2	2.8	1	23	531	554	531	554	0.97
10	16	0.0015	0.38	13.2	2.2	1	23	951	974	951	974	0.97
11	16	0.00086	0.22	13.9	0.1	3	23	1255	1275	1253	1275	0.97
12	16	1.1	2.9e+02	4.2	6.5	1	23	1281	1304	1281	1304	0.97
13	16	0.0049	1.3	11.5	2.2	1	23	1353	1377	1353	1377	0.97
14	16	1.3	3.4e+02	3.9	2.6	1	23	1504	1527	1504	1527	0.93
15	16	0.018	4.8	9.7	0.4	3	23	1576	1596	1574	1596	0.93
16	16	0.00032	0.084	15.3	4.6	1	23	1602	1624	1602	1624	0.98

Sequence Information

Coding Sequence: atgtattttttctttctgcttACAGTGACGGCAGAGACTGGACCCGATCAACGCGACGGCTGCAACGAGAGACAAACGGATGTTGCATCACCATTGGTCAGCAGTGAGCAGCCCGAAGGTAGTCACCCGTGCCCGGCCTGTCCGCTCGTACTCGCCACATCGCGCGACCTGACGCACCACCTGCGTGGCCACAATTCGCCACGTAGCACCGACTGCAGCGGCGAGGAAGTCGACTACGCCTGCGGCGTCTGCCACAAAGTCCTCAGCTCAGCAAGCAGCCTTGATCGCCACGTGCTTGTGCACTCTGGTGAGCGTCCGTTCAAGTGCAAGCACTGCGACATGGCCTTTACGACGAACGGCAACATGAACCGCCACCTGAGAACAGCCCACCACCGTGGTGCCTCGCCATCGCACAGCTATACTGATTCCGAGGGAGGCAGTAGCGATAGCGAGAGGCCACTAGTGAAGAGACGTCTCATCCAGGAGGAGTACAACAATAATGAGATCTCGAAGAGGAAATCACCAGATCTACTGGAGAAGAAACTGAGGTCGCCCGAGATTGGGAAACGCAAGTGTCCCGATTACGCCGACGAGGCTGACAGCCAAAGGCGACACAAGGTTCTACTGAATGACTCGCGATCGGCCATCAAGGGCGCATACACTGAGCAGTCAGCACAAAACTACAACTGCTCAGTCTGCGGTAGGCAAGATTTTACGAGTAGCGCCATGCTAGACGCTCACTACGAAACGAGCCATCCAGATTCACCCGTCAGATGCGAGCCCTGCAACGAGTCCTTTAAAAATCATCGGGCTCTCAGCTTGCATCGATACATGATCCACCAAAGCGACCAACAACGTAACGACGTCGTAGTGCCGAGGCACCTACGCAACAGCGTCGTCGGCTTCAATGACCTGACCTTCATGGACTTTTCTGCGGGAAAATTCCCAGCCATCGCCCGTGCTGTATGCGAGCAATCGCTACACAGACCGGCATCGGGAGAGACACCGAAGTATCAGTGTTCCAAGTGCCTCAGGGCATTCCCCTGTCAATCAGCGCTGGATGCACACGAAACAGATTGCGGACAGCCCACGACCGAGCAGAGGATGATGCATGACGACCAGTCGATGAGAAATGATTTCTTTGCTGGTCTGGACTTGCAAAACAAGGCTGCCCTTACTGAGGCCAAAGAAGGCAAGGACTTGGCTGATATCCAGAGCATCATCTCATCCGTATCATCTGGACCGATATTACAGAACTTCTCGAGGTCTGACGCTAGCACACCtgataattgcaaaattaaacagaGCTTTGGATCCTCGGGATCTTCCGGAACACCATCCTCGGAATACCATGAAGAAGAAGCTCAAGATGCCTTTGCAGCTGAGTTTAGAAGAATGAAGATGAAAGGCGAGTTCCCTTGCCGATTGTGCACAGCAGTGTTCCCGAACTTGCGGGCACTGAAAGGCCACAACCGTGCACATATGAACATCCCACCGGGTATGGCTTACCCCTGTAACATGTGCCCATACAGTAGCACTGACAAAGCCACGCTGGTGCGGCACTTGCGCTCGCACAATGGCGACCGGCCTTACGAATGCTCGCTCTGCAACTACGCCTTTACGACTAAAGCCAACTGTGAGAGGCACGTGCGCAATCGTCACGGTAAGCTCTCCCGTGAGGAGATCAAGAGCATTCTAATCTACCACCCAAGCGAAGACTCCACGAACGATGGCAACCTCGAGAGCAGTTCGCCCCGCCTTATAAGGGATGAGGTACGCAAGTCCCTTGTTTATCCCGAGCGCGATGAGCTGCCCTCGCAGCCAATGCACTACCCGGAGATCAGGATCAAGGACGAAGCCAAGTTGCGTCAACCTGGACTGCCGGGTCTCCACGCCATTGGAATGAATCATTACGAAAAGAGCGAGCTGTTTGCCAGACCACCAACGATGCAAGCACTGGAGCTGTCGTACAGAACTGAAGATCTAGAGAAAGCTCATCAGATGAAGCAACAGCTAGAAGATGACCTGGAAGACGAGCGGTCTTCGGATGGCAGCGTGAGTCTAGTCACCGATACCAAAGCCGATCAGTCGGCAGTAGCTGTATCAGCAGTACACCAAAGAACCCAAGCCAGTCCCATGGACTTGAAAAAGTCAGATGACATCAAGGAGTCGGCGACACCAGCGGTGACAGGAACTGGTGAAGATGCACCCCTCGACTTATCGATGGACGTACTCGACTTAAGCAAGAAGGAGTCGGCCAAGCTTGCTGCAGCAACTGCAGCTGCCAATCTAGCAGCTGCCAACAAGGAGCGCGAAAGTAGCAATGACATTAGCAGCAATTTTGAAGAGCAGCTGCAGGCCAATCATAAGGACCTGTACAATACTACCAGCCTGCTGACCAGTTTGTTCAAGGCCGGCCAAGTCGGTACCGACACCTTTACCAACTACGCCAACCAGATGCTTTACCGCAGCCTGCCATTTCCTGGTGTAGGAGCTGGCTTCTTACAACCGTACATTTATCCACACTTGCTCGGCCAGGATCTGGCGATGAAGGACCGACTGCAAAAAGAGCTCGTACGTGGTCTTCAGACCAGCGGTGGTAGCCTCGTTGAGCGTCCCACTCCGAACTATGCCGCGGCCTTCCCTCAGAATCCGCGAAGCTCTTTAAATCAAGTAAACGACCAAGTAACCGAGTACACAAGTATGATGTCAacgaaattgataaataaaccGATGACTTCACGTGAACGAACTGAAACATCACCTTCATCTAATTCCGTTAAAATGGTCATCAAAAATGGCGTATTGATGCCTAAGCAGAAACAACGACGCTACAGAACCGAGCGGCCATTCACCTGCGAACACTGCGCTGCTAGGTTCACATTGCGTAGCAACATGGAACGTCACATCAAACAACAACATCCACAACATTGGTGCCAGAGGCCTAGAGGAGCGCATTCCACCAGAGGCAGACCGCCAGCGAATCCTCCTACATTGCTTCATAGTCTGACACAGTCACAGAACCATCAGGCAATGTCGCAGTATCCTACACTACTGCCAAAACTGAACTCGTCTTTGAATTCCGATTACGGAAAACACGCCATTTCTGATGAAGTCAAGTACGCTATCTTATCACAACAGCTTAAAGGAAACAAACCAGAAGAAAATGACACTGATGAAGAATTGATCATCGATGAAGAGTCGGCCAACCAGGAGAAAGAGGCCCGAGCTAGAGAGCCAACGGAAAGGACGTTAAGTCTTTTGCGAGGTAAATTAGAGGCTAATATTGAATCAAAAGCTAACGAAGATATTGATATGAAAGAATCGAGAGTTTCCGATGTAATAAAAGATAAGCTCAAGGAAAAACTGGAGAATCATACTGAATATAACGATGATGAGGAGAGAGACATGAAAATGGAGGACGAATCTGGAGAATCTGATTGCGAGAAGGTAGAACCACGTGATTTTGTTAAAACCGAAATGGACCTAGATGTTAAGGAAGAAAACAATGAAGATCTGGCTAGTGTTTCGGAACTTCTTGATAACGCATCTCAAAATTACCAACAGTTTCAATCGCAATACATGAGCGACGAAGAAGGCTTAGTCGCCTCCACAAGCGACTGCAACCAATCGGGCAGTGATGAAAAGTCTGACTCCTTCAATTCTGGCAATTCTGGCTCTTCAACTtccaaaaagaagaagaagatgaagaagaagaaaaagaagaagtctGCTTATTCACTCGCACCCAACCGTGTGATCTGCCCGTACTGCTCTCGTCCCTTCCCTTGGACGTCGTCACTGCGCCGACACATCCTCACACACACCGGTCAGAAGCCATACCAGTGCATGCACTGCTCGCTACTCTTCACGACCAAGTCAAATTGCGACCGCCACCTGCTCAGGAAGCACAAGAACGCAGCGCAGAAGCTTCATCATCCACGTACGCGCAGCACTTCGTCGCCAGAGCCAACGGAGAGCACACCGCCAACTTGCGGCAACAACAATTCTAGTACAGCCAGCCAATTCGCTATGAGAAATGTGCCTGAGCGCCCATACAAATGCAACCAGTGCCCCAGCTCTACATTCTCCACTCTGGGTAACCTCAAGAAGCACCGGTCAACAAAACACGCATAccatcaccaccatcatcacGAGTCAGCCAAGTCCCGACCGGAGTCGCCCATCAGTGATCCTCAGCCCAGTCCACAGGAGTGCCAGCAAGATTTCCCCCAAGATTGCAGCCAAAAGTCACCATTGGAATGCGTCCAGGAGGAAATCCCTCAGGACTGTTCCAAACAGAACAACGAACAAAGTGGCTACGAGAGCCAGTCGTCCAGTGTCTCAGAAAATCTCGAAAAGAATAGCTCGACGCCGCTTAACGCCTCTAAGAGCTCGAGTGTCAGCGCTGGTGTCAGTAGCGCAAATACATCGTCTGCCAACGAGGCTTCGCGCTCTCGCAGAACGTCGCCTAGGTCCTCACCAGGTCCCACCGGGACTGAGGCACCATTCAAATGCCACCTCTGCGATAGCGGCTTTTCTGAGCGCCAGGACTGTCTGGACCACATACGCGACATCCACGAAAGCGAGTTCCAGCTACTCGTGACCAAAGGCGCCCTCGACATGGACATTGATGAGGAGCCGATGCCGCCTGTGCCACCCCCGCCTAGCGATGGCGAGGAGAGACGCGGAAAGTTTCCTGACTACAGTAACAGAAAGGTGATCTGCGCGTTCTGCATGCGTCGCTTCTGGTCGGCCGAGGACCTGCGCCGCCACATGCGCACGCACACGGGCGAGCGGCCGTTCTCCTGTGATATCTGCGGCCGTCGTTTCACCCTCAAGCACAGTATGCTACGTCACCGCAAGAAGCACGATTCGATTGACTCGAGCATGTACGTTGGCACAAGCGGCGACGAGGACAACGGCACCGGTACCGGTGGCAATGCCTCTTCCTCGTCGATCGCGCAACCGCCGACGATAACGCCCCGACACCAATCTGGTGCCAGTGTCAGCGGCGTCTCTACCAGGCTGCAGGAACGCAACTCCTTGCCTCAGGTGGCAAGTGTTGCTACCGGTGACGCAGCGCCTAGCGGACTCATGCGCTTCAATCCGTACGAGAAGCTGACGACGCTAACGGGTAaattgacgacgacgacgagttcGAATCTGGTCGACGCCAATGACAACACCGACAACGATCTCATCTCTAATCTGTTGGGCATCAGGGACAAGAGTATCATCGACCGGGTGCTACAAGCACCCGACGACGCCGCCAAGCTTCTTGGCGTCAAGGGTAGCGGTGAATGA
Protein Sequence: MYFFFLLTVTAETGPDQRDGCNERQTDVASPLVSSEQPEGSHPCPACPLVLATSRDLTHHLRGHNSPRSTDCSGEEVDYACGVCHKVLSSASSLDRHVLVHSGERPFKCKHCDMAFTTNGNMNRHLRTAHHRGASPSHSYTDSEGGSSDSERPLVKRRLIQEEYNNNEISKRKSPDLLEKKLRSPEIGKRKCPDYADEADSQRRHKVLLNDSRSAIKGAYTEQSAQNYNCSVCGRQDFTSSAMLDAHYETSHPDSPVRCEPCNESFKNHRALSLHRYMIHQSDQQRNDVVVPRHLRNSVVGFNDLTFMDFSAGKFPAIARAVCEQSLHRPASGETPKYQCSKCLRAFPCQSALDAHETDCGQPTTEQRMMHDDQSMRNDFFAGLDLQNKAALTEAKEGKDLADIQSIISSVSSGPILQNFSRSDASTPDNCKIKQSFGSSGSSGTPSSEYHEEEAQDAFAAEFRRMKMKGEFPCRLCTAVFPNLRALKGHNRAHMNIPPGMAYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSILIYHPSEDSTNDGNLESSSPRLIRDEVRKSLVYPERDELPSQPMHYPEIRIKDEAKLRQPGLPGLHAIGMNHYEKSELFARPPTMQALELSYRTEDLEKAHQMKQQLEDDLEDERSSDGSVSLVTDTKADQSAVAVSAVHQRTQASPMDLKKSDDIKESATPAVTGTGEDAPLDLSMDVLDLSKKESAKLAAATAAANLAAANKERESSNDISSNFEEQLQANHKDLYNTTSLLTSLFKAGQVGTDTFTNYANQMLYRSLPFPGVGAGFLQPYIYPHLLGQDLAMKDRLQKELVRGLQTSGGSLVERPTPNYAAAFPQNPRSSLNQVNDQVTEYTSMMSTKLINKPMTSRERTETSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCAARFTLRSNMERHIKQQHPQHWCQRPRGAHSTRGRPPANPPTLLHSLTQSQNHQAMSQYPTLLPKLNSSLNSDYGKHAISDEVKYAILSQQLKGNKPEENDTDEELIIDEESANQEKEARAREPTERTLSLLRGKLEANIESKANEDIDMKESRVSDVIKDKLKEKLENHTEYNDDEERDMKMEDESGESDCEKVEPRDFVKTEMDLDVKEENNEDLASVSELLDNASQNYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSFNSGNSGSSTSKKKKKMKKKKKKKSAYSLAPNRVICPYCSRPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNAAQKLHHPRTRSTSSPEPTESTPPTCGNNNSSTASQFAMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHAYHHHHHHESAKSRPESPISDPQPSPQECQQDFPQDCSQKSPLECVQEEIPQDCSKQNNEQSGYESQSSSVSENLEKNSSTPLNASKSSSVSAGVSSANTSSANEASRSRRTSPRSSPGPTGTEAPFKCHLCDSGFSERQDCLDHIRDIHESEFQLLVTKGALDMDIDEEPMPPVPPPPSDGEERRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICGRRFTLKHSMLRHRKKHDSIDSSMYVGTSGDEDNGTGTGGNASSSSIAQPPTITPRHQSGASVSGVSTRLQERNSLPQVASVATGDAAPSGLMRFNPYEKLTTLTGKLTTTTSSNLVDANDNTDNDLISNLLGIRDKSIIDRVLQAPDDAAKLLGVKGSGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01465648;
90% Identity: iTF_01465648;
80% Identity: -