Basic Information

Insect: Torymus texanus
Gene Symbol: -
Assembly: GCA_036873485.1
Location: JAYJLV010038889.1:2461-4538[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.043 11 8.6 1.5 1 23 311 333 311 333 0.98

2 9 0.0029 0.75 12.3 4.5 1 20 339 358 339 361 0.97

3 9 8.7e-06 0.0023 20.2 1.3 1 23 367 389 367 389 0.97

4 9 2.3e-05 0.0061 18.9 4.2 1 23 395 417 395 417 0.98

5 9 6.5e-05 0.017 17.5 0.8 1 23 428 450 428 450 0.98

6 9 5.4e-05 0.014 17.7 2.3 1 23 456 478 456 478 0.97

7 9 3.2e-06 0.00083 21.6 0.6 1 23 484 506 484 506 0.95

8 9 6.3e-05 0.017 17.5 0.2 1 23 512 534 512 534 0.92

9 9 7.2e-06 0.0019 20.5 0.2 1 23 540 562 540 562 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.043	11	8.6	1.5	1	23	311	333	311	333	0.98
2	9	0.0029	0.75	12.3	4.5	1	20	339	358	339	361	0.97
3	9	8.7e-06	0.0023	20.2	1.3	1	23	367	389	367	389	0.97
4	9	2.3e-05	0.0061	18.9	4.2	1	23	395	417	395	417	0.98
5	9	6.5e-05	0.017	17.5	0.8	1	23	428	450	428	450	0.98
6	9	5.4e-05	0.014	17.7	2.3	1	23	456	478	456	478	0.97
7	9	3.2e-06	0.00083	21.6	0.6	1	23	484	506	484	506	0.95
8	9	6.3e-05	0.017	17.5	0.2	1	23	512	534	512	534	0.92
9	9	7.2e-06	0.0019	20.5	0.2	1	23	540	562	540	562	0.98

Sequence Information

Coding Sequence: ATGAATTGGGAGATAAGTTGGGTAGACATGTGCCGGGCATGTATGGAAGCAGAAGGTGAATTGTTTCCTCTGTATGACGATGGTTGTGAAACAACTGAAAATGATTTACCAAACAAGCTTGCGGAATTGACATCTATAGAGattaatagAAGTGATGGTTTACCAACCAAACTATGTGccaaatgtattgataaaactacagcattttttaaatttaaaagcctAGTACAAGACTCAGATAAAAAACTCAGATATATGTTCAATAAACAAGGAGACCAAGTAGATGACCAAATAAAAACTGAATGCAATGAACCTGTAGATTTATTAACAAAAGAGTGTCAAAACAGTACAGCATATAATCAAGTAGTTTGTGATAATGATATAGTATCCCAatcaaatgaagaaaaatttccaGATACAGATGCTAATATTATAGAAGACTTGCAAAATGCTTGTGATACGGTAATTTTAAATGTACCAGAAAATCCAGATGGTGCTAATGATGAAATGCAAATGCATGTtgtatttaaaacaaatgaTATGAATACAATAAATGTTGCAAATGAATCTGAACTCATTGAAAATCAAAGCAATTTTGAGATACAAGAGCCTGATGATTTATCAATGAATGACTCAGCGAATAACGATGATGAATATAATGATATTCTTGAGGCTGCAGTGCAAGTTATAAATGAAGATTctaagttaaataatattaatttacagaaTGAAGATAGTGATTCCGATTGTTATACCAACTCGCAGGATAACATTGTCGGTAGCCTTAATGATACAATAACAAAAGTTaaagaaatcaaagaaaatggTAAAGTAGTTCAATACCAATGTACACTTTGTCTGCAAGATTATCCGGTACTTGCAGAGGCCTTGTGTCACATAGTTGATTTGCATGTGCCAAAGGGTGGACCATTTTACTGTGTTGTTTGTGAAATGGACTGTGACAGTATTAGGCAATTAAGGACACATGTTAAAACGCACAAGGGTCCTAACCCTTACACGTGCTTCCTCTGCAATAAATCTTATATAATGAAAAGATACCTCAAGCGCCACATGGTTTGTCATACCGATTTTGCACGACATAGATGTGCAAAGTGTGGAGAAAGATTTAAAGTTAAGAGTGAATTAGAATCTCATATTTCATCTCATACTTCAGGATCAGCATTCAAATGTAGTCAATGTCCCCGACAATTTAATCATAAAGGAAATTATAAGCGTCATTTAATTTCTCATCTTGATCCGCAAGGTCTTCATTTACCGAAATTTCCTTGTAGTATCTGCAAtagaagatttttaaataatcgtacTTTAGTTACTCATATGAGAGTTCATACTGGAGAAAAGCCATATAAATGTATTACATGCAATAAATCATTCTCTCAgcaaggaaattttttaaatcatcgaAAAATTCATACTAATCCACGCAGCTTTACATGTGAAGTTTGTGGAAAGAGTTTTAATCAAAAAGCTACTTTAAGGGACCATAGTTTGTTACACACAGGAGAAAAGCcttatatttgtacaatatgTGGTTCAGCATTTACATTTAGTGCTGCTCTTCGTCGTCACATGTGGACTCATAGTGAAGGAAAGCCTTTTGAATGCGATATTTGTAATGCTAAATTCATTGGAAGATATGATCTTAGACGCCATATGTTGATACATAGTGGAAAACCTAGATTAAGGAGACCTAAAACTAGTAAATCCAATAAATCAAAAGAAGCTGTAGTTGTTCCTGAGGAAGTTACTAATCTTGTAGTAGATTCATCTAATACTAGTAATACAATATTTGTTGAGCAAATTTTCTTATGTGAAAATGattctatacaaattatttcTCATGGAGATTCAGGAAAAGAAAATGGCGACTCTATTCTAAATCTTATTGAATATgcctaa
Protein Sequence: MNWEISWVDMCRACMEAEGELFPLYDDGCETTENDLPNKLAELTSIEINRSDGLPTKLCAKCIDKTTAFFKFKSLVQDSDKKLRYMFNKQGDQVDDQIKTECNEPVDLLTKECQNSTAYNQVVCDNDIVSQSNEEKFPDTDANIIEDLQNACDTVILNVPENPDGANDEMQMHVVFKTNDMNTINVANESELIENQSNFEIQEPDDLSMNDSANNDDEYNDILEAAVQVINEDSKLNNINLQNEDSDSDCYTNSQDNIVGSLNDTITKVKEIKENGKVVQYQCTLCLQDYPVLAEALCHIVDLHVPKGGPFYCVVCEMDCDSIRQLRTHVKTHKGPNPYTCFLCNKSYIMKRYLKRHMVCHTDFARHRCAKCGERFKVKSELESHISSHTSGSAFKCSQCPRQFNHKGNYKRHLISHLDPQGLHLPKFPCSICNRRFLNNRTLVTHMRVHTGEKPYKCITCNKSFSQQGNFLNHRKIHTNPRSFTCEVCGKSFNQKATLRDHSLLHTGEKPYICTICGSAFTFSAALRRHMWTHSEGKPFECDICNAKFIGRYDLRRHMLIHSGKPRLRRPKTSKSNKSKEAVVVPEEVTNLVVDSSNTSNTIFVEQIFLCENDSIQIISHGDSGKENGDSILNLIEYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01469954; iTF_01465634; iTF_01467401; iTF_01466532; iTF_01468265;
90% Identity: -
80% Identity: -