Ttex003098.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus texanus
Gene Symbol
-
Assembly
GCA_036873485.1
Location
JAYJLV010000011.1:24713618-24717523[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.00042 0.11 14.9 1.4 1 23 281 303 281 303 0.95
2 10 0.38 98 5.6 0.1 1 20 310 329 310 333 0.88
3 10 1.6e-05 0.0042 19.4 0.5 2 23 526 547 525 547 0.97
4 10 8.9e-07 0.00023 23.3 1.3 1 23 552 575 552 575 0.96
5 10 1.1e-05 0.0029 19.9 0.2 1 23 608 630 608 630 0.98
6 10 8.3e-07 0.00022 23.4 0.8 1 23 640 662 640 662 0.96
7 10 3.1e-06 0.0008 21.6 1.2 1 23 668 690 668 690 0.99
8 10 1.5e-05 0.0041 19.4 0.2 1 23 696 718 696 718 0.98
9 10 8e-06 0.0021 20.3 2.6 1 23 724 746 724 746 0.98
10 10 0.0006 0.16 14.4 0.3 1 21 752 772 752 773 0.94

Sequence Information

Coding Sequence
ATGATGGAGCCGAACATCTACGGTAGCAGGgccgatcatcatcatcatcagcagcagcaacaacagcaacatcaacaacaacatcatGAACACCATCATCATAATCTTATGGCGAACGGTTTGGAAACGGAATGGACTTGTAGATTATGCTCCAGGAGGTGTACTGGAGATACAAGACATTGGGGACTCTTCGAGGAGGCGGAACTTGTACAGAAGCTCATGGCGTTCGCCGCAGTACAGgttCAGGAAAATGATGGATTACCAACTATTGTTTGCACAAACTGTAGGAGTTTAGTTTTCATGGCTTATGATTTCAAGTGTCAAGTAGAGAAGAGTGACCATGACCTTCGGCAAGCTCTCCTCATGAGACAACCAACATTACACTGGCCTATCATTCCATATGATAAATCTAGTGAAAACCTAAGTATAGTAGAAACTATGGTACCTTGTCTCCACAAAAGTATTGATAATTGTATTACATTTCAAGATCAAACTGTAAATAGTCATgaacaatttatatttgaaatcgcAAATAGTTGTAATTTGGCTAGTGAAACTTCTACAACTGAAAATCAAATGCAATCAAGTCATTTAGAAACAAACAAGGGAATAGCAGAAGATAattctatatcttttgaaattccTAATGTTACTTCTGAAAGTGGAAGCAATGGAGGAGACCCTACTATAACATTTGAAGCACACTATGAAATGAAGAATGATATATTAATCAAACAAGATAAAGATATTACAAAAGTACAATCAAATAATCCTGATGAAGTTTTGAATTATAGCGATGATAGTGATGAAAAACCTCTAATTTTACGAAAACAAAAACGTTTCACATGCAATCATTGTATAAAGTCTTTTTCTACTATGTCATTACTAGAAAAACATGCTGTTATTCATAGAAGATTTGAAATACTTTATATGTGTTTTTTATGTGATGAACAATTTCCTACAGTGGAGAAAGTCAAAAGTCATGCAGTAGAAATTCATGATATGCATttggataaagaaaaaatactgcAGAGTACCAGAATGCGAAGGATAACTGGCTGGATTAAAAACATTGATGATCATGATACTAATAAAGAAAGCGACCCTTTATCagaagaagcaaaagaaaataaaaatactaaatacgtttGTCCAGTAACAGAAGCCATTTCTGATCCagaaatgatacaaaatatttctggATCGTCTAGTATGAATGATGATCTTCAAATGAGGCATACAGAAAGTATTTCTCATATGATAGATATGGAAACTGCTTCTCATcaagaaaatactgaaattaCTCCTACAGAAAATCAAAACGTTTCTCACCAGATAACAAATGAGGAAAATACTCTTTCACAAAATCAATTGCATGCTGAAGATACTGGTGACCAAAATAATATAGTTCACTCTGAAtatgatgacgacgatgatgatgatgatgatgatgatgattatgacgacgacgacaatgatgataatgatgataatgatgacgatgatgatgatgatgatgattattgtGATGAgatcaatgataaaaataaagaagatatgcTTTCAGCAAATATACAATGTAATCAATGTGGTAAACTCGTTGCAACTCAAAGAAATCTTAAGAGGCATCTTTTGACACATTCAGGGCTTAAGTATAAATGTTCAATCTGCAATAAAGAATTTTCTAGACCAGACAAACTTCGGGAACATCAGCAGCTTAAACACAAAGAAGAAGTATTTGGCAAATCAGATTCAGAAAATGAATCCTCAGATGATAATAGTCAAGAAATAAATCCAAAAAAGGATAAAAGTAATCGACCTTACAAATGTTCATTATGTCCTAAAGCATTTGTACAACCACAGTCATTAAATAATCATGAAGAAAGACATAAACGTGGTCGAGATGTTCAAAAACGCTATTTATGTGAAGTTTGTAGCAAATGCTTTGCTCAAAGTGGATCATTGGTAGCTCACATGCGCACGCATACAGGTGTGAAACCATATGTTTGCAATGTATGCAGTAGAGCTTTTACTAAAAGTACATACCTGCAGTTACATCTCAGAACACACAGTGGAGAAAAACCATACATATGTCAGTATTGCAGTAGAGCTTTTGCTCGAGCAAATACATTAGCAAGGCACATAACTATGCATACAGGTGAAGCTAAATATCAATGCCAAATTTGCACAAAATCCTTTAGAAGACTGACATCTTTGAATgagcatacatacacacatacaggtCAAAGACCATATGCTTGTAAAATTTGCTCAAAAAGATATAACAATGCTGGATCCTTATATGCTCACACCAAAAAATGTAAAGCTTCTCAAGAAACTCAGGAAGTAAAAGAATTTCAAGCTTCTCTTAACTCAAGTGATAATAATAGTACAGTTAATAATGTACAAAGTGACAAAAATTTACCAGCAGAACTCATTATTTTCACTGAGATGAGGAGAGATGAGACAATAACAGACGAATCATTAATGCCTGAACCTCCAACATGCCAATATATAGTTACAGATATACATGCTGAAAAGTCAATGTCAAACAATATCCTTGAACATTTTCCCGTTCAAGAACCTGATGTTTTCAATATGAATGAAAAGCAATTTAAGACGCCCTACTATGGATTATATTCAAGTTTGTAA
Protein Sequence
MMEPNIYGSRADHHHHQQQQQQQHQQQHHEHHHHNLMANGLETEWTCRLCSRRCTGDTRHWGLFEEAELVQKLMAFAAVQVQENDGLPTIVCTNCRSLVFMAYDFKCQVEKSDHDLRQALLMRQPTLHWPIIPYDKSSENLSIVETMVPCLHKSIDNCITFQDQTVNSHEQFIFEIANSCNLASETSTTENQMQSSHLETNKGIAEDNSISFEIPNVTSESGSNGGDPTITFEAHYEMKNDILIKQDKDITKVQSNNPDEVLNYSDDSDEKPLILRKQKRFTCNHCIKSFSTMSLLEKHAVIHRRFEILYMCFLCDEQFPTVEKVKSHAVEIHDMHLDKEKILQSTRMRRITGWIKNIDDHDTNKESDPLSEEAKENKNTKYVCPVTEAISDPEMIQNISGSSSMNDDLQMRHTESISHMIDMETASHQENTEITPTENQNVSHQITNEENTLSQNQLHAEDTGDQNNIVHSEYDDDDDDDDDDDDYDDDDNDDNDDNDDDDDDDDDYCDEINDKNKEDMLSANIQCNQCGKLVATQRNLKRHLLTHSGLKYKCSICNKEFSRPDKLREHQQLKHKEEVFGKSDSENESSDDNSQEINPKKDKSNRPYKCSLCPKAFVQPQSLNNHEERHKRGRDVQKRYLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYQCQICTKSFRRLTSLNEHTYTHTGQRPYACKICSKRYNNAGSLYAHTKKCKASQETQEVKEFQASLNSSDNNSTVNNVQSDKNLPAELIIFTEMRRDETITDESLMPEPPTCQYIVTDIHAEKSMSNNILEHFPVQEPDVFNMNEKQFKTPYYGLYSSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01469937;
90% Identity
-
80% Identity
-