Ttex066173.1
Basic Information
- Insect
- Torymus texanus
- Gene Symbol
- -
- Assembly
- GCA_036873485.1
- Location
- JAYJLV010102310.1:1-847[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-09 1.3e-05 26.8 0.0 7 39 2 34 1 37 0.91 2 2 4.6 7.6e+03 -1.3 0.0 17 23 83 89 81 91 0.83
Sequence Information
- Coding Sequence
- GTACGAGCTGTGACACTAGTATTAGAACAAAAAGCAACTACCTGGCAAGCTGCTAAACAGTACGACATACCGTATCGTACATTGCAAAGacatCTGGAAGAAGCAGGATATGCTCCGATACAACAGGATATTAGGAGAATAGCTTACAGTTTTGCAGTACGTAATAATATTAAGCATCCTTTTAATGAAGTAAGTAAAATGGCCGGTAAAGATTGGTTTCGATCATTCATGAAAAGACATCGAGATTTATCAGTAAGGAAAGCACAAGCCATTTCAATAGCCCGAAACATGGGTATGAATAGAACAGAAGTTAGTAGCTACTTTGATATACTTAAAGATATTTACGTAAAATGCAACGTTAATTTAACACctgcaaatatatttaatatggaCGAGACTGGCTTACAATTAAACAATGAAGCTGGAAAAGTTGTGGCTACTAAAGGTACCAAAGATGTACATATATTGACTTCTGCAGAAAAAGGAGAAACAATAAGTGTAATAACGTGTTGCAATGCAGAAGGTCAATTTATTCCACCGTACTGTATAATGAAAGGTAAAAATTTAAGACCAGAATTTGAAGACGGTTTACTACCAGGTTCtaaagtaaaaatgaatgaaaaatcagCTTACGtgaatactgaaatattttttgatcgaCATGATttctgcattaccggcaacacgatattatttatttattcagagactaggcaacctagcaacatatcACAAGTTGACCctcattcttctcaataa
- Protein Sequence
- VRAVTLVLEQKATTWQAAKQYDIPYRTLQRHLEEAGYAPIQQDIRRIAYSFAVRNNIKHPFNEVSKMAGKDWFRSFMKRHRDLSVRKAQAISIARNMGMNRTEVSSYFDILKDIYVKCNVNLTPANIFNMDETGLQLNNEAGKVVATKGTKDVHILTSAEKGETISVITCCNAEGQFIPPYCIMKGKNLRPEFEDGLLPGSKVKMNEKSAYVNTEIFFDRHDFCITGNTILFIYSETRQPSNISQVDPHSSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -