Ttex065624.1
Basic Information
- Insect
- Torymus texanus
- Gene Symbol
- -
- Assembly
- GCA_036873485.1
- Location
- JAYJLV010100746.1:4612-5735[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-10 5.4e-07 31.2 0.0 3 37 19 53 17 58 0.91 2 2 5.7 9.5e+03 -1.6 0.0 17 24 153 160 153 161 0.84
Sequence Information
- Coding Sequence
- ATGCCACCTAAAGGAAGCaagattgtaaaaaagaaaaatggaggttatacagtagaaaaaattaaagaagctaTAGCAGCATTAAATGATGGAATGTCATTAAGAGCTGCTAGTAAACAGTTTGGTGTACCGAGGACTACATTATTGTATAAACGTAAAGGTATTACCCCATTGGAATGTAAGAAAGGTCCAGAAACAGTTTTGAAGGTAGAACAAGAGAATGAACTTGTAGAATGGATTCAGAGATTTAGTGATTTAGAATTTATTGCAACAAAGAATCAAATTTTTGATAGTGTTCAAATACTATTGAATGATTCTCAAGCCAAATCCAAATTTACAAACAATCGACCAGGACGTCATTGTTATGATATTGAAGAAAACAAGAATATTGGAAAGGAATGTGTATCAGCATTATTTGCAGGAAATGCTAATGGAGAAATAGTACCACCTATGGTGATATCTTTAAACAAAGCTTCATCAGAAACTATTCAACAAAATATACCTAATGATTGGCTAGACATGTGGCTTATATCCTCTGGATTATGA
- Protein Sequence
- MPPKGSKIVKKKNGGYTVEKIKEAIAALNDGMSLRAASKQFGVPRTTLLYKRKGITPLECKKGPETVLKVEQENELVEWIQRFSDLEFIATKNQIFDSVQILLNDSQAKSKFTNNRPGRHCYDIEENKNIGKECVSALFAGNANGEIVPPMVISLNKASSETIQQNIPNDWLDMWLISSGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -