Ttex028441.1
Basic Information
- Insect
- Torymus texanus
- Gene Symbol
- -
- Assembly
- GCA_036873485.1
- Location
- JAYJLV010037423.1:1-3922[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.6e-06 0.0027 19.3 0.0 1 37 127 163 127 171 0.85 2 4 0.072 1.2e+02 4.5 0.0 25 35 252 262 251 268 0.84 3 4 0.5 8.2e+02 1.8 0.0 5 19 293 307 292 308 0.85 4 4 0.016 27 6.5 0.0 15 39 399 424 394 428 0.85
Sequence Information
- Coding Sequence
- GAACTTTTGTGCCATCTGAACGAGGAACATTCTACTATAATCCTCACTGATATAGCTCCACAGGATATAAGATCAATTGTAGAATTCAGCTACAAAGGAAAAATTGGAGTACCCGTGGAAAACTTAAATAATCTGATAGAAGCAGCTCACTTTCTAAAGATATACGGTTTGATGGAAatcGAAAACCTTGAGGAGACTGAAGCTTCTAATGAGAAAGATGTCTCTGGCAAAGAATGTTATACtcttaatgaaaatatagaGTATGAAGATAATAAACAGATATATAGAAAAGGAAATATTAATAAGGcaaatgaagaaaagaaaagaaattatacaGATTCTGATTCAAACCTAAGATATACATCTAAGAGAGATTACACTGATGAAATGTTAAAATCTGCTCTTGATGAAATTCGTAATGGAAGCACATACTTTAAAGCAGCTGCCAAACATTGTATACCTAAGTCTACTCTGCACATGCGAGCAAAGGCTCTTGGTATAGCATCGAACCGATGTAGAAACGAATATACACTTAAAGATAAAAAGCAAACTATAGAAGCTGCCACAATTGGATCAAATTCACAACAAACTGCAGATATTGTTGGTACACCAAAAACAGTTTTAAGGAAGGGAATTCAGAAAGAAGGTTACAGGTCTAATAGGCATgacagaagaaaaaattatcctcCTGACAAAAGAGAAGATGCTGTAAAATCTTTAGAGAGAGGAGAAGACCTTaccaaatttgaaaatgaatataaaaTTCCGAAAACAACGCTATCCAGGGACAAAGCACGTCTTGTTGACGAGGAGAAATTACCTTCAACATTtaggaaaaaatgtaaaaccgATGGAGAGGATCATGAACAACTACGTTTAGAAGAAACTGTGACTGCCTGCAAAAGCGGTAAAATGTCTCAAGATTCATCACCTAAAAAATCACCAAAGAAGGGAGATTCAAATGGCAATAAAACGGTAGAAGTGATAAAAGCAGAAGAGTTGAATAAGGCTAATTTTGAGGCAGACAATCCGCTTGTTGTCACAATGGAAGATGAAACTATATGCACTCTGTGTGACGAATTGCTACACAATGGTAAAGATAATATCACTATGATTCGGTCTAGAGGTctacaaagttttataaataaaagccaaagtagaaaagataaaaagtttaaactatGGATAGGAAAGGAAAATATGAGTGTTCACAAAATTTGTAGAAAGCGATATTCGGTATTACCATCAACGCTACGTAAGAGGAAGAGAAATTCATCACCAAATGGCAATAAAACGGTAGAAGTGATAGAAGCAGAAGAGTTGAATGAGGCTAATTTTGATGCAGACAATCCGATGGAGGCTGGCTATTGCACGCTGTAG
- Protein Sequence
- ELLCHLNEEHSTIILTDIAPQDIRSIVEFSYKGKIGVPVENLNNLIEAAHFLKIYGLMEIENLEETEASNEKDVSGKECYTLNENIEYEDNKQIYRKGNINKANEEKKRNYTDSDSNLRYTSKRDYTDEMLKSALDEIRNGSTYFKAAAKHCIPKSTLHMRAKALGIASNRCRNEYTLKDKKQTIEAATIGSNSQQTADIVGTPKTVLRKGIQKEGYRSNRHDRRKNYPPDKREDAVKSLERGEDLTKFENEYKIPKTTLSRDKARLVDEEKLPSTFRKKCKTDGEDHEQLRLEETVTACKSGKMSQDSSPKKSPKKGDSNGNKTVEVIKAEELNKANFEADNPLVVTMEDETICTLCDELLHNGKDNITMIRSRGLQSFINKSQSRKDKKFKLWIGKENMSVHKICRKRYSVLPSTLRKRKRNSSPNGNKTVEVIEAEELNEANFDADNPMEAGYCTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01469055;
- 90% Identity
- iTF_01469055;
- 80% Identity
- iTF_01469055;