Basic Information

Gene Symbol
ARID5B
Assembly
GCA_036873485.1
Location
JAYJLV010012129.1:4231-31652[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.8e-25 6.2e-21 76.5 0.0 1 89 298 384 298 384 0.95
2 2 8 7.3e+04 -10.0 7.8 61 61 1401 1401 1373 1423 0.43

Sequence Information

Coding Sequence
ATGGAGCACAAGGGGGTGGCGCTCTGTAGCGGTGCGGGCAGGAACCGCGAGCGCGCGAAGCTGAGCAGAAGTTTCGAGGGTGCAGGTGTAGGTGTCGCCGCGATTCGTGTACCAGTTGAGGATGAGGTACTGACGATCTCGGAGAAGGTGGTGGTGCGCGTGCACGACCTCGTCACCTGGCTCTCACCGTCCCTCGAGTGGTCGTGGGGCCGTGAGATCTCCTACCCGTCGTCGCCCTCCTCGTCGCCCGAGAGCAGTCCCCATCCGCAGGTACTCTCGGACCCGGGCCTCGACTTCTCGGACGTCGAGCGCCATCAAAAGGACCTCGAAGCCCTGTACACTCGTCGCGGCATCAGCATCGTCGATACGCAGAACGGCCACGAAAGCCAAACGAAGGTCGTGGTGCTGTCGTACCCGAGGTACTGCCGCTATCGGGCGCTCCTGAGGCGACTCGACGGTTCCGAATCAACCTGGCTGTGCACCTCGATTGCCGCGGCTCTCGGCGGTTTCACCGCCTTGCCCGGCACCAGAGTCCTCTTCTGTAGGGATACCTTTGATTATCCGGACCTCGAGACGCACGAGCTGCTGTGCAATCATTTAGCGCCAAAACTAAAAGGAAGGCCTCGGAGGAAGCGCAAAAAGCGCAGCGTGTCACCGGGCGAGTCGAGCAACGAGAGCGAGGCCTCGGTCGCCTCCTCGGCGGCTGCCTCCACATCCAAGGGCTCGAGCTCGAGCAACAACGGCAATGGTAATAACGCCAACAATGGCCAATCGATTACAGGTCCGAGCGGTACACCCGGAAGACCGCTCGGTGCCTCGTCGTCCTCATCGTCTAGTTCGagctcatcgtcgtcgtcgctggctCGACGAAGCGACCGCAAGATCACGGCCGAGGAGAAGAAGTTCGTTAGCGAAGTCTACAGCTTTATGACGACACGCAACACGCCACTCGGAAAAATGCCCTTGCTTGGATACAGACAGattgaTCTATTCCTATTCTACACAAAAGTTCAAGATTTAGGAGGATACGACAAAGTTAGTGCAAATCGTCTTTGGAAATCAATCTATGATGAAATGGGTGGTAATACAGGTTCAACAAGTGCTGCAACTATAACGAGAAGGCACTACGAAAGgtTATTGCTACCTTATGAAAGATGTCAGAAAGGTGAAGATTCCAAAATTAAGCCAAATCATGGTAATAGACGTATCAAAACACCTAGTATATCAGATGCATCAGAGGATTCCACTGAAATAAAGAGGGAAGCAGATAGTCCCACGCCATCAGAAACTCCTACTGAAGCAACTAATAATAACAATTCTACGACGATTACACCTCCTTTACAGTCAATTCTTGCAGCTACgCCATTCCTGCCAGGAGACAAACCTCGCTCTGAAAGCGGCAAGACATCGTCATTGCGCAGCGTGAGGGTAAAGCCCGAGCGTTTAAAGTCCCTGAATACGATAATCGCGACCAGCAACTCAGCGCCTGCCAATCAGCAACTGCCCACCTCGCCGACCTCCTTGCTGACGACGTCGAACAATACGACGTCGTCGTCTGCGATTTCCTCGCCCACGAGCACCCCACCCGCTTCGACCACGCCAACGAACGCCAATCAGCATTCTGTGCTCGAGAGGCAACTCAATAGTCCTTTAATATCACAACAGGTACCACCATCGTGTTCACCACCTGGACTGCCTGTGAGCACAGTGGTAACAAACGCCACAACAGTGGTGACGCTGACTCCGCCACCCGAAAAAGACATGAAGGAGATTAAGCTCGATTCAAAGCAAACAAGTCTGTTAGCTCAGGGCAAGGAGAACATTCCCGTATTCGAGGAGAAAAGCCCGATATACGTGGACAAACCCCGTTCGCCCGAGGTTATAGACCTAGAAACGGAGAACGAGTCTGGTACCAGGGACAAGCTTATCATTCCGAGCTTCAAGAAGCGAAAACTCGAGATACTGCGCGAAGGTGGTCTCGAAGTTACTGCTGTTGATTTAGATAATCGACCGAGCGTCATCCAGCCGCCGACAACGACCACAACGACGACGGCCGCTTCGTCTTTGCCAGCCtcaacaacgacaacgacaacgactaTGTCCTCCTCGTCTCCGACCCCGTCCTCACCGGCTTCCTCGCCACAACTGATCAACGTGACCGTCACCCCAGACATTAGCCATATGTTACCACGTTCCGCTTCCGAGGAAAGTGGTCACCTTCCAGTATCTCCCGTACGGCCGCAAGTTGCTGGTGGTTCCAGCTCGAGTCCGCGACTGCAGCCGCAGCCGTGGGCCGTAATGGATCCCAGCTATGGTGTCGCACCCGCGAGTCAGGCTCTGGCGACGAACAGTCGCGTTATCAATCTTGGTAGCTCCAATCCATCCTCGTTGATACAATTGTACGCGAATGCGAACGTACCCATGCCGAGATCGGTGAACATGGCTGCTGCGCAACAACAGCAGGCGATGCAACATCAGATTCCGACACATATACCACAACATCAGGCTTCGAGCAGATTGGTTCCGCCGTCGTCTGTCGTTGCACCTGAGAGCAGGTTACCAGTTACGCCGCACAAGGTCACCCAGTCAAGATCGATTTTTGGCACCGATGGCAGCACAACGTACGGCAATCCGAAGGATATTCTTGTACCTGCTAGAAACGCAGGAACATTATCGTCACCAGGCTCGCGGAGTAGCAGCGGCAGTGGTAACGAAATGTCGCCGAACGGCGTTTTGGATCTCACAAAGACGTCCCCGGATCGACCAATGTACGGACGACCGAACCTCGAGATAGTTAGGGTACCCGTCGTGCCTCGTCCAAATCCATTAAACTTTGACACGAATCATTTGCGCGGTCCGCCCGTCGGTATGCCCACCAATCTCAGCAACAAACCGCAGCCGCAGCAACAgccacagcagcaacaacagccaccacaacagcagcagcagcagcagagcaaaCACGTAGGGCCGCCAGCAGACATGAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcagcagcaacaacagccaccacaacagcagcagcagcagcagagcaaaCACGTAGGGCCGCCAGCAGACATGAGAAATCAGTACATGGGCGGTCCTTCTTCTAGCTCGGGCCCTGGTACTTATCCGAACGTGCTCGACAGTCGTACAATGGCCACGAACAATCTTGAAATCACACTCGTCAGTCCGAAGAAGAATGGCGGGGGTATGGTTGATGTGCCTCAGGCAAGTCCCTCTAGGGgtaatgtACCACTAAATATGCCTATGCAGAGGAGGCCCCCGCCACATTTACAACAAATGCCGTCGCAGCCGCAACCTCCTTCACatccacaacaacaacagcaaccacAGCAGCAAAAACACGTCATGAACGGCAAGTTCCCTAACAGGATACCCTCAGAGGCTACGTCGCCCTACACTCCCAGGAAAGCATCAAGCTCCAATAGTAATAATACGCACCACCCGGTGATACCAAATGTACCTAATCTTAGCCACTTGAACGCGGCGGCAAACTACGCTAAAGCGAATCAAATGAGTGGCTATCATCAGATCTCAggaggagaaaagagaaaagccACTTCTCCGGCGAATTCGAATAGTAAGGAGCAGCGCAGGATAAGCGAAAGCGAGAAAATGAcgatacagcagcagcagagactGTTGGAGGCGTCAACTGCTCCATCGCTGTCGAAATCAGCAAGgGATGCTGAGGCGTCACGTAGACACAGTATGCCAACTCTGCCGAGCCTGCCGACGGGTTTTATTCCGGGCGTTCCGGCCAACAGTCCGGCCTTTCTGGCACACCAGATCGCTGCGGCGAGTGGCGGgaacgcagcagcagcgggaAAATTCATGCCCATGATGGATCCAGCCTCGATGTATTACTCCTTCTATAACGGCCTCTTCCCCGGGCCCGTGGCGCCGAACGCCGCGGCCTCGGCCTTCATCCCACCTGAGATCAGCGCCTATTACAAGGAGCTCCTTGCCAACACTTCGGCCCAACAGCTCGCCATGGCCGCAGCGGcccagcagcaacaacagcatcagcaacagcatcagcaacagcagcatcaacaacagcaacagcagcagcaacaacaacagcaacaacagcaacagcagcaacaacaacaacaacaacagcagcaacaactgCAGCAACAACTGCAGCACCAGCATCAGCCTAGTGTGCCCACGACCAAATAG
Protein Sequence
MEHKGVALCSGAGRNRERAKLSRSFEGAGVGVAAIRVPVEDEVLTISEKVVVRVHDLVTWLSPSLEWSWGREISYPSSPSSSPESSPHPQVLSDPGLDFSDVERHQKDLEALYTRRGISIVDTQNGHESQTKVVVLSYPRYCRYRALLRRLDGSESTWLCTSIAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASSAAASTSKGSSSSNNGNGNNANNGQSITGPSGTPGRPLGASSSSSSSSSSSSSSLARRSDRKITAEEKKFVSEVYSFMTTRNTPLGKMPLLGYRQIDLFLFYTKVQDLGGYDKVSANRLWKSIYDEMGGNTGSTSAATITRRHYERLLLPYERCQKGEDSKIKPNHGNRRIKTPSISDASEDSTEIKREADSPTPSETPTEATNNNNSTTITPPLQSILAATPFLPGDKPRSESGKTSSLRSVRVKPERLKSLNTIIATSNSAPANQQLPTSPTSLLTTSNNTTSSSAISSPTSTPPASTTPTNANQHSVLERQLNSPLISQQVPPSCSPPGLPVSTVVTNATTVVTLTPPPEKDMKEIKLDSKQTSLLAQGKENIPVFEEKSPIYVDKPRSPEVIDLETENESGTRDKLIIPSFKKRKLEILREGGLEVTAVDLDNRPSVIQPPTTTTTTTAASSLPASTTTTTTTMSSSSPTPSSPASSPQLINVTVTPDISHMLPRSASEESGHLPVSPVRPQVAGGSSSSPRLQPQPWAVMDPSYGVAPASQALATNSRVINLGSSNPSSLIQLYANANVPMPRSVNMAAAQQQQAMQHQIPTHIPQHQASSRLVPPSSVVAPESRLPVTPHKVTQSRSIFGTDGSTTYGNPKDILVPARNAGTLSSPGSRSSSGSGNEMSPNGVLDLTKTSPDRPMYGRPNLEIVRVPVVPRPNPLNFDTNHLRGPPVGMPTNLSNKPQPQQQPQQQQQPPQQQQQQQSKHVGPPADMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQPPQQQQQQQSKHVGPPADMRNQYMGGPSSSSGPGTYPNVLDSRTMATNNLEITLVSPKKNGGGMVDVPQASPSRGNVPLNMPMQRRPPPHLQQMPSQPQPPSHPQQQQQPQQQKHVMNGKFPNRIPSEATSPYTPRKASSSNSNNTHHPVIPNVPNLSHLNAAANYAKANQMSGYHQISGGEKRKATSPANSNSKEQRRISESEKMTIQQQQRLLEASTAPSLSKSARDAEASRRHSMPTLPSLPTGFIPGVPANSPAFLAHQIAAASGGNAAAAGKFMPMMDPASMYYSFYNGLFPGPVAPNAAASAFIPPEISAYYKELLANTSAQQLAMAAAAQQQQQHQQQHQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQLQHQHQPSVPTTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01464822;
90% Identity
-
80% Identity
-