Basic Information

Gene Symbol
Arid4b
Assembly
GCA_036873485.1
Location
JAYJLV010000046.1:5404873-5415083[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-28 4.1e-24 86.7 0.2 1 89 309 396 309 396 0.94

Sequence Information

Coding Sequence
ATGTCTTGTAATGTTTTGCAGGGGGACGATCCACCTTATTTGTCGGTGGGCACCGAAGTCAGTGCCAAATACAAAGGGGCCTTCTGTGAAGCCAAAATCAGGAAGGTCGTGCGCAGCGTCAAGTGTAGAGTGACATATAAGCAAGGCTTGGGCACAGCCACGGTCACTGATGACCAGATTAAAGGGACATTGAGAGTGGGTGCTTCTGTGGAAGCCAGGCACAATGATAAAAAGGACTTTGTTGAAGCTACTATCACTAAAATACAAGACTGCAGTCAGTATACTGTTGTGTTTGATGATGGTGACATTACCACATTGAGAAGGACAGCTCTGTGTTTAAAAAGTGGTAGACACTTTGCAGAGAGTGAAACTTTAGATCAGTTACCTCTGACTCATCCCGAACATTTTGGAAATCCAGTCATTGGTGGTAGAAGAGGTAGAAGGTCTCGACAAACTCaggaTGACAGTagtgatgatgacgatgatcgAGGTAATGATTCAGGATCTGGATCAGGGGGGAAAGAAGGACCAGAAACTGAACCAGAAATTGGAAGGGTTGTTTGTGTGGAATTGGGtgacaagaagaaaaaagacaactGGTTTCCCGGATTAGTTGTTGCTCCCACTGCTCAAGATACTGTTAGAATTAGAGTTCGCGATGATTACCTAGTGAGATCATTTAAGGATGCTAGAtaCTATACAGTGCCGAAAAAAGAAGCTACTGAATTTACAAAGGATTTGGTAAATAAAGTAGAGAACAGTGCTTTAAAAATAGCTGTTGAAAAAGCTCtgctatttttagaaaaaaatgaattacctCCTCATTGGGATAGAGATTCATTATTTGGGAACTCGGTATCGAGTGGTAATAGTGACTCAGATGGAGAACTTGACTCAgatagcTCAGATGATGAACCAAGAGAAGAGAAGGATCACTTTGTTGCtcaattgtataaatttatggaCGACCGAGGTACACCGATAAACAATTGTCCGATGATCGGTAACGAGGACATCGATCTCTATAGATTATTTCGAGCAGTTTACAAACTAGGTGGTTATAACCGCGTCACCAATCAAAATCAATGGAAACTTATAACGCGGCGTCTAAGTTTTTCCATGCAAAATAATTCAGCCACGCATAATTTAGTTAAACAggcttataaaaaatttttgcattccTTTGAGGacttttacagaaaattagGCTGTACAATGGTAAACCATCCTAGAGGTAGCATGAGAAAACAAAGACCTGGTCGCAGCTTAATTCGTGATAAAGATCGAAATACACCGGTGCCGATTCAAGATAAATCGCTTACAAAAGCGGAAAAAGATGAAGATGAGAAAGATAAAAAGGGAAATGTTGTAACAGATGAAGATACTAAAAAGGAGAAAcgtgatattaaaaaagaacCAATTATTAAAGATGAAGAAACACagCCAAAAGTTAAACGGAAAGAAGAACCAGCTGAAGAAAGTGCAAGTGGTCAAGAAAGTGATGTTAACATTGATGGCGAGGAAGAGTCTTCCAGTAGCGAAAAGTCACAAAAAAGCTCAGCAAGATTGACTCCTTCAAGTGTTAGTGGTaaatcaaaaacaacaaatacaCCTTCTGTTAAGAACAAAGAAgaggaagatGATAGCACAAAAACTAGATCTAAAGCAAAGGAAGACACTGCAAAAAGTAGTAAAGCCAACATTACTTCAGACACTCGAGAAACACGAACTCCTTCAAGGGATCcagataaaaagaatatttccaAACAAAGAAGAATGACAgatgatgaattaaaaaaacgaggacgaaaaaagaaagacgTTGAAAATGAGAAAGGAAAAAGCACTGAAGAGCGATCAGTAGAATATGCACCTTGTTATAAGGGCCTTGTTGAAGTTGGTGATAGACTTAAAGTATATTATGGGCCCACTCATGAATCAAAAGTTACTTATGAAgcaaaagttattgataaagaACACGAAGGAGTTGATGCAATATACTTGGTTCATTATACTGGATGGAATActagATATGATGAATGGATAAAGAGTTCTAGAATAGCTCATAATTTCACTCAAGCTCAAGGACGAGTGAAACGCGTGAAAACAACACCCCGCCCACAAACTCCGAGCTCAAACTCTTCGAATAAGTCTTCCAAGATCGCAACAACTCCGAGTACAAGTAGTAGTGCTACGTCATCTTCAAGTGGTGCTCAAAGTCGTCGACGAGCGCAAAGTGATGCACCGGGTGGAGCGGGTTCATCTAAAGATTCTCGAAAAGAGGATCGTGAAAGTACTTCTGCAACACGTTCAATGACGCCATCCCCCCTCACCTCTTCCGGATTGCGTACTAAAAGTCCAGCAACTACGGCAAATAGTAGACCTACACGAATCACTAGAAATGCGGATTCAACATCAAATGACCTGGGCAGACGCACAAGGCGTGGGTCAGGCCATGCCGATACAATAACCGCCGAAGAGTTGGAGAGTGAAGATACAGATTCGTTGGATTCTGATGCAAGTGAACAAGAAACGTTGCAGATACAATCAAGGACGAGGATCAGGGGTGGTGTGCAGGAGAAAAATCGCAGAGAAGCGAGACGAAGAGCCGAGAGTCGTATGAAAATTGAGGAGACAAGCGATGGAGAAGTAGAAAAAGATGTCGAGGAACCACGAAGAGGAAGAAGGCTTAGGAAGACTATAGGAAAATTACAAGAAGTGAAATCCGAACCAGAAAGCGATGACGAGCAGCCCAAAGGACGCGATTTTGATTTGAACCAAATTCGGTCGGAACTTAAAGGTTTCGACAAGGCtgttaaattagaaattacCAGTGTTGAACCAGAACCTGAAGAAGAAAAGGGAGAACTACCTTCTATACAGATAAAGGAAGAAAAGTCGGAGGCTGAAAATATTCCTGAAAAGAAGgtGGCCTTAGAGCCAGAAAAGAAACGAGAAGTATCAAAGATTGAACAGCCGAATGTTGTTCCTACTAAACGAGAATCAATTAAGATAGAAGACACCCCATCTGAAAGTACGGATGATATTTATGAGTTTAAAGAACCGGAGCCTTTTGAATTTGAAGTAAGAAATAAGAGAGATTCAGGAGGAAGTACAAGCAGTgtcgaaaaagagaaagagaaggacaaGGAGAAAGATAAACCGAAGAAACGCGTATTTGACGATGATATAAAAAGTCCTAAGAAACGGCAAAAGACATTCGGTACGCCAACTACGCCCATTCAACATAAACCGGAACAGAAACAAGACAGTAGTCCTACAGAGAGCGTCGATCCGAAGAAAAAGCCTcgtaagatttttaaaaagaacgaTGACACGGAGGAAGTTGATACTGAAGGAGAAGATATAACGCCAAATGTCAGAGATcaagtttctaaattttatcCAGCCAATTGTGGGATAATGGTTTTTAAACGTAAAGGAGCTTTCAGTAATTTAACACGTGCTATGGAAGATGGTCCTGCAAATGATGCCATCGCCGCTGACGCGTCCTGTGAAAGTCCAAAGAAAAAGCAGACGAAAACTCTTAGCTCGACAACATCtgtaaaaagtaatgaaattaaacaagaaaCTACTACTATGGATACCGCAgataagaaaaaagtaagaaaaatcttcaataaagcagaagaaaatgaagaaactgAGGAACTCAACAAagaacataataaatttttccctAATTATGCTGGTGTAAAAACTACATTGCGTAAAGATACTTACAGCAATAAATCAATAGTTGACAATGTTGAACTGGACGAAAATTCGTTAAccgataataaagaaaaagctaAAAAAGCAATAGACGAAGATGCATCTAAAACTatgaagaaaaaacagaaaagttTTGGGAATCCAGCTACAAAATCCGAGATTAACTCCACCGATGCCACTGatgcaaagaaaaaaactgtGCGAAGAGTAACAAATAAGAAGACAGGTGAGCTTGAAGATAGCGACGCGAGTGGAACCGACGAAACTGAGGAGCCAATGACTACAAGAGACCACACTAAGTATTTTTCACACTATTCTGGTCCAAAAGCCAAAGCGGCTGCTGCTATGGTTAATGATAATGAGACTACGCAAGAACGACTCAATACACCTAAGTTGGATAACCAAGTTAGCGAGTCTTCAAAATCTACCCTTGTTACTACAAACGCATCAACAAGTCATAATAAAGACGATGCAAAAAACAAAACCACGGATTCAACAACTACCGGTTCTGCACCTCCTGATATAAAATCTactaatttagataaaaaacgAGTGCCAGATTCTGTTGTCTCAGGCAAATCAGAGATAAAGCAGGAGATGAAGCCTCTAGATTTTACTCCTATTATTCCTCACACTTTACCAGTACCAGCACCGATTAGCGCTCGTTTGCCAGCGACAGCTagtatagaagaaaaattatctgCTGCAGCAGTATTCCGTAGTAAacttaaagatataaaaaaagatgagGATTTGGATAATGTTCCAAGAAAAACGCTTAAGGATACTATAAAGAAAGTTGAAACTACTTCTGCAAAGaaagtcaaagaaaaagaaaaggaagaaaagacaAAACATGAgccagaaaaaaagaaacaaattgtAGATAACCCAATTATAAAAAAGGATCCTCTACAAGAAATTGAGATACGTAGAGATCCATTacttgaaatgataaaaaagaaagaagaggaagTTCTAAAGGCTACTACTACAACAATAACAACGCCAATTGTTACCAAAACTTATGGAAATTTGAAGAAAGATCCAGCTATGAAGCTTGAAGATACATGGAAAAAGGCAGCCCCATCCATTGCAAGTGTTAGTACTACGGAAGTTTCTAATGAAATTACTAATAATGATTCAAGTAAAGACTTTGTAGTTGCGCGAAAAGAAACTATAGTTAGCAAGATAAAATCCACTATAGATCGTGACTCAGTTGATTCAACAGATAGTAGTGATTCAGAAAGAAGATTAACAATTATTGATAGTGAAGAATTTCTCGATGATAAATATAATGAGCCCACTTCTGACATCAAAACTAAGTCTACCTCTTCATCTACAAGTGGACAATTTAGTAGCATTACTCGACAAGAGCAGCCAAACGTTATAACAAAACAAAGCGAATTAGCACAATCCATTGGTACTGCAGCTATCATTAATGCAATTACACAAGTTAAGAGCTCCAGAGTAGAAGAGGATGgtgaaaatttgaactcttTATTATGTGAAGAGGAAATTCCTGGATCGCCAACACCAGGACTAGAATCTTCTGATCATGAACATAGAAGTAGTAGTACTCAGAATCTGACAAAAACAGATCTTGcaacagGTAGTAAGATGGCTGTTGCTTTCGTAGCTGCTCAAATGCCACTGAGCACACTTCCATCGTCTACTCATTTAACAAAATGCACATTGGTTACAACAATGagcagtagtatagcagcaTCTCAAAGTACCAGCAGCCTTGTTGCTGTATCGATGGCAACTCAGCATGTATCTGTTCAAGCTGTGCGTCAGACTTTAACTCAATCACAAGTTCAAACACAAGTTCAACCACAAGTTCAACCACAAGTTCAAccacatcaacaacaacaacttcaacaacaacaacaacaaccacaaccACAACCACAACCACAACAGCAATCTTTACCTCAACTACAAGTACAGTCTTCATCGCAAGTACAACCTCATCAACAACAGCTTCATCCTCCGCAACCACTACCTCCACATCAACATAATGAACAAGCACCACCTCCAATAGCTGTTGCTGTACAGCGTAGACAGAGTAACGAAGCTGCTCCAGTGATGGATAACACGCCACCTACAACGCCTGATTCCTTATTATCCAATATCTCGGGCTCACCACGTGACGAAGGTACTGGCGGTTCTACACCCTCGTCGGAGGATAATTCTAAGTTGAATCGTGATAGTTCCGAAGCTGAGAATGAAAGTGCTGGGAAGGGCAGTGGTCCAGGATTTAGTGAAGATGATGGATCGTCACTTGTGAACTCGGAATTAGGAGGCAATGGTGGTGCGACTTCTTCCTCGTCTGATCGCATACCGAAACCTCCTGCTAAACGTTCTTCGATTGTGGATAATGAAAATGTTTCACCAAAGAAGcgtaaaaagagaaaagatcAGGATAACAACCCAGCTTTCGGTCAGAATAGCTCTTCTGGTAAAAAGTCTCCCAGGCAAAGCACACGAAATGTGAGACAGGGAACTGGAAGTGATAGTGACGACACGAGTGAAGGCTCAAATCCAAGTACAAACAACTCTGCTCCTCAGACAAATAATACACCAAGTGCAGTCCCTGTAGTAGTTGTTAACGCAGCGTCCAACAACATGCCCGTTGGTGGAATGAACAATGTGGGCAATCCAGATAACGGATTGCTGCCCTCAGGAAGACcgcgaaaatataatttccttACAGAACTTGatCCTACACTAGATGGAAATCAAAGAATAGCTATTCTGCAGCAAAGACTGACAGATATACGCAAaacttataataatgtaaaagctGAACTAGCTACAATTGAGAGGcgtcgaaaaaaattaaagcgaaGAGAACGAGAAGcACAAAAAGCTGCGAAAGCTGAAATGCAACAAGCATGTTCGTGA
Protein Sequence
MSCNVLQGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASVEARHNDKKDFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQTQDDSSDDDDDRGNDSGSGSGGKEGPETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKDLVNKVENSALKIAVEKALLFLEKNELPPHWDRDSLFGNSVSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFSMQNNSATHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRNTPVPIQDKSLTKAEKDEDEKDKKGNVVTDEDTKKEKRDIKKEPIIKDEETQPKVKRKEEPAEESASGQESDVNIDGEEESSSSEKSQKSSARLTPSSVSGKSKTTNTPSVKNKEEEDDSTKTRSKAKEDTAKSSKANITSDTRETRTPSRDPDKKNISKQRRMTDDELKKRGRKKKDVENEKGKSTEERSVEYAPCYKGLVEVGDRLKVYYGPTHESKVTYEAKVIDKEHEGVDAIYLVHYTGWNTRYDEWIKSSRIAHNFTQAQGRVKRVKTTPRPQTPSSNSSNKSSKIATTPSTSSSATSSSSGAQSRRRAQSDAPGGAGSSKDSRKEDRESTSATRSMTPSPLTSSGLRTKSPATTANSRPTRITRNADSTSNDLGRRTRRGSGHADTITAEELESEDTDSLDSDASEQETLQIQSRTRIRGGVQEKNRREARRRAESRMKIEETSDGEVEKDVEEPRRGRRLRKTIGKLQEVKSEPESDDEQPKGRDFDLNQIRSELKGFDKAVKLEITSVEPEPEEEKGELPSIQIKEEKSEAENIPEKKVALEPEKKREVSKIEQPNVVPTKRESIKIEDTPSESTDDIYEFKEPEPFEFEVRNKRDSGGSTSSVEKEKEKDKEKDKPKKRVFDDDIKSPKKRQKTFGTPTTPIQHKPEQKQDSSPTESVDPKKKPRKIFKKNDDTEEVDTEGEDITPNVRDQVSKFYPANCGIMVFKRKGAFSNLTRAMEDGPANDAIAADASCESPKKKQTKTLSSTTSVKSNEIKQETTTMDTADKKKVRKIFNKAEENEETEELNKEHNKFFPNYAGVKTTLRKDTYSNKSIVDNVELDENSLTDNKEKAKKAIDEDASKTMKKKQKSFGNPATKSEINSTDATDAKKKTVRRVTNKKTGELEDSDASGTDETEEPMTTRDHTKYFSHYSGPKAKAAAAMVNDNETTQERLNTPKLDNQVSESSKSTLVTTNASTSHNKDDAKNKTTDSTTTGSAPPDIKSTNLDKKRVPDSVVSGKSEIKQEMKPLDFTPIIPHTLPVPAPISARLPATASIEEKLSAAAVFRSKLKDIKKDEDLDNVPRKTLKDTIKKVETTSAKKVKEKEKEEKTKHEPEKKKQIVDNPIIKKDPLQEIEIRRDPLLEMIKKKEEEVLKATTTTITTPIVTKTYGNLKKDPAMKLEDTWKKAAPSIASVSTTEVSNEITNNDSSKDFVVARKETIVSKIKSTIDRDSVDSTDSSDSERRLTIIDSEEFLDDKYNEPTSDIKTKSTSSSTSGQFSSITRQEQPNVITKQSELAQSIGTAAIINAITQVKSSRVEEDGENLNSLLCEEEIPGSPTPGLESSDHEHRSSSTQNLTKTDLATGSKMAVAFVAAQMPLSTLPSSTHLTKCTLVTTMSSSIAASQSTSSLVAVSMATQHVSVQAVRQTLTQSQVQTQVQPQVQPQVQPHQQQQLQQQQQQPQPQPQPQQQSLPQLQVQSSSQVQPHQQQLHPPQPLPPHQHNEQAPPPIAVAVQRRQSNEAAPVMDNTPPTTPDSLLSNISGSPRDEGTGGSTPSSEDNSKLNRDSSEAENESAGKGSGPGFSEDDGSSLVNSELGGNGGATSSSSDRIPKPPAKRSSIVDNENVSPKKRKKRKDQDNNPAFGQNSSSGKKSPRQSTRNVRQGTGSDSDDTSEGSNPSTNNSAPQTNNTPSAVPVVVVNAASNNMPVGGMNNVGNPDNGLLPSGRPRKYNFLTELDPTLDGNQRIAILQQRLTDIRKTYNNVKAELATIERRRKKLKRREREAQKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01464820;
90% Identity
-
80% Identity
-