Tsin021238.1
Basic Information
- Insect
- Torymus sinensis
- Gene Symbol
- nfxl1
- Assembly
- GCA_030522985.1
- Location
- JAPYZP010018687.1:1893-4634[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 3.7e+04 -3.2 1.1 15 19 123 127 122 127 0.81 2 18 0.81 2.8e+04 -2.9 0.2 4 10 158 164 158 164 0.87 3 18 1.2e-08 0.00041 22.2 16.7 1 19 172 189 172 189 0.99 4 18 6.1e-07 0.021 16.7 13.8 4 19 228 243 226 243 0.94 5 18 0.61 2.1e+04 -2.5 0.2 5 10 267 272 267 274 0.86 6 18 0.00027 9.2 8.3 10.7 1 19 278 297 272 297 0.89 7 18 0.0002 6.8 8.7 10.7 1 18 333 350 333 351 0.97 8 18 0.012 4e+02 3.0 8.0 1 12 385 396 385 396 0.94 9 18 0.47 1.6e+04 -2.1 1.0 6 10 406 410 405 410 0.92 10 18 2.6e-07 0.0089 17.9 15.8 1 19 416 434 416 434 0.93 11 18 0.00011 3.8 9.5 7.6 9 19 482 492 480 492 0.90 12 18 0.021 7.2e+02 2.2 8.9 3 12 503 512 495 512 0.84 13 18 0.86 2.9e+04 -2.9 5.8 14 18 543 547 543 548 0.89 14 18 0.00023 8 8.5 6.7 1 12 584 595 578 595 0.91 15 18 0.78 2.7e+04 -2.8 1.7 6 10 611 615 610 615 0.88 16 18 0.0043 1.5e+02 4.4 16.1 4 19 625 640 623 640 0.91 17 18 9.4e-05 3.2 9.7 12.3 1 18 685 704 685 706 0.87 18 18 0.93 3.2e+04 -3.0 0.9 6 10 735 739 734 739 0.89
Sequence Information
- Coding Sequence
- ATGAGAAAATTTAGAAGAGCTCAAGCACAAAATCAAGCTTCAATTGAGAAACACTTAGTGGCAAACAATGTTGAGTCTTCTAGCAGTGACGATGAAAATGAGGAAGTATTAGAAACAGCAGTTGAGAAAGTATTGTCAACTTATCAACGAGAAGGTGGAGATGTCAATAAGACTTCATCTTATTTAACTGAAACTTTGCAATCTGGAGGAGCTGTTTGCTTAATATGTATTTCTTCAGTAAAGAAAACTGATGCAATTTGGAGCTGTGTTGAATGTTACACGTTTTTACATTTACCGTGTATTCAGCACTGGGTGCGAGATAGTTTAAGTTATAAACATGAAAAGGGAATTACACCTTTATGGGCTTGTCCAAAGTGCAGGTCAGAATATGGGGAAGATCAGATACCACGAAAGTATGTATGCTTTTGTGGAAAAACTGAAGACCCTCCTTATCAACCATGGAGTATTCCTCACTCTTGTGGGGATATGTGTGGAAAGTTTTTACAACCAAAATGTGGGCACAAATGTATGCTTTTATGCCATCCTGGTCCTTGCCCTCCTTGTCCAAAAATGGTATCAATTGCATGTTTCTGTGGGAAACAAGCACCTTGTCCTCGTAGATGCAATGCTAAAGAATGGAGCTGTGGTGAGctatgcaataaaaaatataagacttGCGATCATAAATGTATGGAAAAGTGTCATTCCGGTACTTGTCCACCTTGCTCAGAAATGCTTCTAACTGCATGTAATTGCAAGAATAAATGTGAATCAAGAAAATGTAATGAAGCATTTTGGCGATGTGATAAAACTTGTGGGAGACGCTTTTCATGTAATGTACATGTTTGTGAAGACAAGTGTCATAAGCCAGGAGATTGTAGTATATGTCCACTAGAGCGTAATAGAACTTGTCCATGTGGTAAGAAAAAATATGCTATATCTTGTAAACAACAGCAAGCTCCAACTTGTGGAGATACttgtggaaaattattagaatgTGGAGCTCATAATTGTAATATGAGATGTCATACAGAGCGTTGTGGACAATGTTTAGAAGTTGTAACAAAAACATGTCGCTGTGGAAGTTTTAGTAAAGAACTTGCTTGCATTAAAGAATtccattgtaataaaaaatgtacacaaACGAGACTGTGTGGCAAACACTTGTGCAACAAAAAATGTTGTGATTGTTTagtgaaaaatacttttaatgcaTGTGAAAAAGTTTGTGATAATACATTAAATTGTCGCAAGCATAAGTGTCCTGCGCCTTGTCATAGTGGACCTTGTTACCCTTGTCCACGTACCATTGTTATTCAATGTCGTTGtggtaaaagtaaaattactgtTCCTTGTGGAATagttaagaaaataaaaccacCACATTGTAACAAAATGTGTAAAATTCCACCAATTTGCCATCATCCCAAAAGAGAATCACACAAATGTCATCAAGGTGCTTGCCCACCATGCCGTAAAGTTTGTGGATTGACTCATAAAAGATGTGCTCATACTTGTCCAGCATTATGTCATACCAAAGTATGGACTAAATTTAAACCAAACGGAGTTACAAAACCAATTGGGCCTTGGGAAAATCAAAAAGAAAGGTGGGAGTACCAATCTTTTCCATGTCCTCCTTGTGAAGTTTCTGTAATGGTTACTTGTCTTGGAGAACATGAAACACGTCCATGGCCTTGTTATAAAGCTATTGCTAGTTCTTGTCTTAGAGAATGTGGTCAATTATTAACATGCACAAATCATTATTGTGAAAAACTTTGTCATAAATTACAATCACcagatgatgataatgatgaaaataaatgcATGGAATGTGAAAAGCCTTGTGCTTTCTCAAGACCAAAAGGGTGCACACATATTTGTCCGAAACCTTGTCATCCGGCTCCATGTAATCCATGTAAacaattagtaaaaattgcctGTCACTGTGGAATAAATTCTCTTTACATTCGCTGTGCTCAGCTTACTTCTGCTACTGTTGAGCAGAAGAATGAACTTTTACAATGTGGAAATCAATGTCCTCGAAACTACCCTTGCGGCCATCGTTGTATAGATAACTGTCATCCTggactttgtaaaaaagctgaATCTTGTCATAAAAAGGTAAAAGTTTTATGTAAATGCAAAAggataaaaaaagatttttcgtgTACATCCATACGAGCTGGAGAAGCTATTGTAGAATGTGATGAAGTATGTCGAAAAAAGAAGGAAGAGTTGGATCGAATTAAAGAGCTTGAACAGgagaaaaaacgaaaagaaGAAGAGCTGAAGAATCAGAAAGAAATTGAAATGtttgaaaagaaattcaaacCAAAAAGAAGAGGAAAGGATCGTCATAATAATAAAGAAGAGTCCAATGATAATGGTAATTCCCATAAATGGATATGGATAATTGCTGTATTTATCATTGGAGTTTCTGCTGCAATAGTACTGACATTTCAGACAAATCCAGACTCACTTTATTTTGGGTAA
- Protein Sequence
- MRKFRRAQAQNQASIEKHLVANNVESSSSDDENEEVLETAVEKVLSTYQREGGDVNKTSSYLTETLQSGGAVCLICISSVKKTDAIWSCVECYTFLHLPCIQHWVRDSLSYKHEKGITPLWACPKCRSEYGEDQIPRKYVCFCGKTEDPPYQPWSIPHSCGDMCGKFLQPKCGHKCMLLCHPGPCPPCPKMVSIACFCGKQAPCPRRCNAKEWSCGELCNKKYKTCDHKCMEKCHSGTCPPCSEMLLTACNCKNKCESRKCNEAFWRCDKTCGRRFSCNVHVCEDKCHKPGDCSICPLERNRTCPCGKKKYAISCKQQQAPTCGDTCGKLLECGAHNCNMRCHTERCGQCLEVVTKTCRCGSFSKELACIKEFHCNKKCTQTRLCGKHLCNKKCCDCLVKNTFNACEKVCDNTLNCRKHKCPAPCHSGPCYPCPRTIVIQCRCGKSKITVPCGIVKKIKPPHCNKMCKIPPICHHPKRESHKCHQGACPPCRKVCGLTHKRCAHTCPALCHTKVWTKFKPNGVTKPIGPWENQKERWEYQSFPCPPCEVSVMVTCLGEHETRPWPCYKAIASSCLRECGQLLTCTNHYCEKLCHKLQSPDDDNDENKCMECEKPCAFSRPKGCTHICPKPCHPAPCNPCKQLVKIACHCGINSLYIRCAQLTSATVEQKNELLQCGNQCPRNYPCGHRCIDNCHPGLCKKAESCHKKVKVLCKCKRIKKDFSCTSIRAGEAIVECDEVCRKKKEELDRIKELEQEKKRKEEELKNQKEIEMFEKKFKPKRRGKDRHNNKEESNDNGNSHKWIWIIAVFIIGVSAAIVLTFQTNPDSLYFG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470178;
- 90% Identity
- iTF_01466799;
- 80% Identity
- -