Basic Information

Insect: Torymus sinensis
Gene Symbol: RREB1
Assembly: GCA_030522985.1
Location: JAPYZP010003893.1:11470-27426[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.019 4.3 9.8 0.2 1 23 54 76 54 76 0.96

2 16 0.00042 0.098 15.0 0.1 1 23 91 113 91 113 0.97

3 16 2.4e-06 0.00055 22.1 4.5 1 23 119 142 119 143 0.97

4 16 0.087 20 7.7 0.2 1 23 240 264 240 264 0.95

5 16 0.46 1.1e+02 5.4 3.1 2 23 270 292 269 293 0.92

6 16 5 1.1e+03 2.2 0.6 1 16 350 365 350 369 0.80

7 16 0.087 20 7.7 0.1 1 23 484 506 484 506 0.96

8 16 3.3e-05 0.0076 18.5 0.3 1 23 515 537 515 537 0.98

9 16 0.0016 0.37 13.2 2.8 1 23 543 566 543 566 0.97

10 16 0.0016 0.37 13.2 2.2 1 23 964 987 964 987 0.97

11 16 0.00093 0.22 13.9 0.1 3 23 1269 1289 1267 1289 0.97

12 16 1.2 2.7e+02 4.2 6.5 1 23 1295 1318 1295 1318 0.97

13 16 0.0054 1.2 11.5 2.2 1 23 1367 1391 1367 1391 0.97

14 16 1.4 3.3e+02 3.9 2.6 1 23 1519 1542 1519 1542 0.93

15 16 0.02 4.6 9.7 0.4 3 23 1591 1611 1589 1611 0.93

16 16 0.00035 0.081 15.3 4.6 1 23 1617 1639 1617 1639 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.019	4.3	9.8	0.2	1	23	54	76	54	76	0.96
2	16	0.00042	0.098	15.0	0.1	1	23	91	113	91	113	0.97
3	16	2.4e-06	0.00055	22.1	4.5	1	23	119	142	119	143	0.97
4	16	0.087	20	7.7	0.2	1	23	240	264	240	264	0.95
5	16	0.46	1.1e+02	5.4	3.1	2	23	270	292	269	293	0.92
6	16	5	1.1e+03	2.2	0.6	1	16	350	365	350	369	0.80
7	16	0.087	20	7.7	0.1	1	23	484	506	484	506	0.96
8	16	3.3e-05	0.0076	18.5	0.3	1	23	515	537	515	537	0.98
9	16	0.0016	0.37	13.2	2.8	1	23	543	566	543	566	0.97
10	16	0.0016	0.37	13.2	2.2	1	23	964	987	964	987	0.97
11	16	0.00093	0.22	13.9	0.1	3	23	1269	1289	1267	1289	0.97
12	16	1.2	2.7e+02	4.2	6.5	1	23	1295	1318	1295	1318	0.97
13	16	0.0054	1.2	11.5	2.2	1	23	1367	1391	1367	1391	0.97
14	16	1.4	3.3e+02	3.9	2.6	1	23	1519	1542	1519	1542	0.93
15	16	0.02	4.6	9.7	0.4	3	23	1591	1611	1589	1611	0.93
16	16	0.00035	0.081	15.3	4.6	1	23	1617	1639	1617	1639	0.98

Sequence Information

Coding Sequence: ATGAGCGACGTAGCAGTAGTGCACCGCCCGCCGGCGATCGGCATGGATTTCTCGATGAAAGTGACGGCCGAGACTGGACCCGATCAGCGCGACGGCTGCAACGAGAGACAAACGGATGTTGCATCACCATTGGTCAGCAGCGAGCAGCCCGAAGGTAGCCACCCGTGCCCGGCTTGTCCGCTCGTGCTTGCGACATTGCGCGACCTGACGCACCATCTGCGCGGCCACAATTCGCCCCGCAGCACCGACTGCAGCGGTGAGGAGGTCGATTACGCCTGCGGCGTCTGCCACAAAGTCCTCAGCTCGGCGAGCAGCCTCGACCGCCACGTACTTGTGCACTCCGGCGAGCGTCCGTTCAAGTGCAAGCACTGCGATATGGCATTCACGACGAACGGCAACATGAACCGCCACCTGAGGACAGCCCACCACCGCGGCGCCTCGCCCTCGCACAGCTGCACCGATTCCGAGGGCGGCAGTAGCGACAGCGAGAGGCCGTTGGTGAAGAGACGCCTCATCCAGGAGGAGTACAACAACAATGAGATCTCGAAGAGGAAGTCACCGGATCTACTGGAGAAGAAGCTGAGGTCGCCTGAAATCTCGAAACGCAAGTGTCCCGATTATGCCGACGAAGCTGACAGCCAGAGGCGACACAAGGTTCTGCTGAACGACTCGAGATCGGCCATCAAGGGCGCGTATACCGAGCAGTCAATTCAAAACTACAACTGCACAGTCTGCGGTAGGCAGGACTTTACGAGTAGCGCCATGCTCGACGCGCACTACGAGACCAGCCATCCAGATTCACCCGTCAGATGCGAGCCCTGTAACGAGTCGTTTAAGAACCATCGGGCACTCAGCCTGCATCGATACATGACACACCACAACGACCAGCAGCGTAACGACATCGCAGTGCCGAGACACCTGCGCAACAGCGTCGTCGGCTTCAACGACCTGACCTTCATGGATTTTTCTGCTGGAAAGTTCCCAGCCATCGCCCGGGCTGTGTGCGAGCAATCGCTGCACCGACCGGCTTCGGGAGAGACACCCAAGTACCAGTGCTCCAAGTGCCTCAGGGCATTCCCCTGCCAGTCAGCGCTGGATGGACACGAAACAGACTGTGGACAGCCCACGACGGAACAAAGAATGATGCATGACGACCATTCGATGAGGAATGATTTCTTCGCCGGACTTGACCTTCAGAACAAGGCTGCCCTGGCTGAGGCCAAGGAAGGCAAGGACTTGGCTGACATCCAGAGCATTATCTCGTCTGTGTCGTCTGGACCGATATTACAGAACTTCTCGAGGTCTGATGCTAGCACCCCCGATAATTGCAAGATTAAACAAAGCTTTGGATCCTCGGGATCTTCTGGTACACCGTCCTCGGAATTCCACGAAGAAGAAGCTCAGGATGCCTTCGCAGCTGAGTTTAGGAAAATGAAGATGAAGGGCGAGTTCCCGTGTCGATTGTGCACAGCGGTGTTCCCGAACTTGCGGGCACTGAAAGGCCACAATCGTGCACACATGAACATTCCACCGGGCATGGCTTATCCCTGCAACATGTGCCCGTACAGCAGCACTGACAAGGCCACACTGGTGCGACATCTGCGCTCTCACAATGGCGATAGGCCTTACGAGTGCTCGCTCTGCAACTACGCCTTCACGACCAAAGCTAATTGTGAGAGGCACGTGCGCAACCGTCACGGTAAGCTCTCCCGCGAGGAGATCAAGAGCATCCTGATCTACCACCCGAGCGAAGACTCGACGAACGACGGCAACCTCGAGAGCAGTTCGCCCCGCCTCATAAGGGATGAGGTACGCAAGTCCCTTGTTTATCCCGAGCGCGATGAGCTGCCCTCGCAGCCGATGCACTACCCGGAGATCAGGATCAAGGACGAAGCCAAGCTGCGCCAACCTGTACTGCCAGGTCTCCATGCCATCGGAATGAATCATTTCGAAAAGAGCGAGCTCTTCACCAGACCACCGACAATGCAGCCGCTCGAGCTGACGTACAGAACCGAAGAGCTAGAGAAAGCTCACCAGATGAAGCAACACCTGGAGGACGACATGGACGACGAGCGGTCCTCGGACGGCAGCGTGAGTCTAGTCACCGATACCAAAGCCGATCTTTCGGCAGTAGCAACATCAGCTGTACACCAAAGAACCCAAGCCGGTCCGATAGACTTGAAGAAGTCAGATGACACCAAGGAGTCTGCGTCACCGGCTATGACGGGAACTGGCGAGGATGCGCCTCTCGACTTGTCGATGGACGTACTCGATTTGAGCAAGAAGGAGTCAGCCAAattggcggcggcggccgcggcagCTGCCTCCCTAGCTGCTGCTAACAAAGAGCGCGAAAGCAGCAACGACATTAGCAGTAACTTTGAGGAGCAGCTGCAGGCCAACCAGAAGGAACTGTACAACACAACAAACCTGCTGACCAGCCTCTTCAAGGCCGGCCAAGTTGGAGCTGACAGCTTTACCAACTACGCCAACCAGATGCTTTACCGCAGCCTGCCTTTCCCTGGTGTAGGAGCTGGCTTCCTACAACCATACATGTACCCGCATTTGCTCAGCCAGGATCTGGCAATGAAGGATAGACTACAAAAGGAGCTCGTACGAGGTCTGCAGACCAGCGGAGGTAGCCTCGTTGAACGACCCACTCCAAACTACGCCGCGGCCTTCCCTCAAAATCCGCGGAGCTCTCTAAATCAAGTAAATGATCAAGTGACCGAATACGCAAGTATGATGTCGTCAAAATTGATGAACAAACCAATGACATCACGTGAGCGGACTGAAACATCACCTTCGTCTAATTCCGTTAAAATGGTCATTAAGAACGGCGTATTGATGCCTAAGCAGAAACAACGACGCTACAGGACCGAGCGGCCATTCACCTGCGAACACTGCGCTGCCAGGTTTACACTACGTAGCAACATGGAGCGTCACATCAAACAGCAACATCCACAACATTGGTGCCAGAGGCCTAGAGGAGCGCATTCCACCAGAGGAAGACCGCCGGCGAATCCCCCTACTTTGCTTCACAGCCTGACGCAGTCACAGAGTCATCAGACAATGTCGCAGTATCCTACACTACTGCCAAAACTAAACTCGTCTTTGAATTCCGATTACGGCAAGCACGCCATTTCCGATGAAGTCAAGTACGCCATCTTAGCGCAACAGCTTAAAGGAAACAAGCCTGAAGAAAATGATACCGATGAAGAATTGATCATCGATGAAGAATCGGCCAATCAGGAGAAAGAGGCCCGAGCTAGAGAGCCAACGGAGAGGACATTAAGCCTTTTGCGAGGTAAATTAGAGGCTAATATTGAATCGAAAGCTAACGAGGATCTTGAAATAAAGGAATCGAGAGTTTCTGATGAACTTAAGGATAAACTTAAGGAAAAACTGGAGAATCATTTAGAATATAATGATCATGATGAAGAGAGAGACTTGAAGATGGAGGACGAATCTGGAGAATCTGACTGTGAGAAGGTGGAACCACGTGATTTTGTCAAAACCGAAATGGACGAAGATGTTAAGGAAGAAAACAACGAAGATCTGGCTAGCGTCTCGGAACTCCTGGATAACGCATCTCAGAACTACCAGCAGTTTCAATCGCAATACATGAGCGACGAGGAAGGCTTAGTTGCATCCACAAGCGACTGCAACCAGTCAGGTAGTGACGAAAAGTCTGACTCGTTCAACTCTGGCAACTCTGGCTCTTCCACTtccaaaaagaagaagaagatgaagaagaagaaaaagaagaagtctGCCTACTCGCTCGCACCCAACCGTGTAATCTGTCCGTACTGTTCACGTCCCTTCCCTTGGACGTCGTCGCTGCGCCGACATATCCTCACGCACACCGGTCAGAAGCCATACCAGTGCATGCACTGCTCGCTTCTCTTCACGACCAAGTCCAATTGCGACCGTCACCTGCTCAGGAAGCACAAGAACGCGGTGCAAAAGCTCCACCATCCGCGCACACGCAGTACCTCGTCGCCTGAGCCGACGGAGAGCACACCGCCAACCTGCGGCAACAACAACTCTAGCACGGCCAGCCAGTTTGCCATGAGGAACGTGCCGGAGCGCCCGTACAAATGCAACCAGTGCCCCAGCTCCACATTCTCCACCCTGGGCAACCTAAAGAAGCACCGCTCAACGAAGCACGCCTATCAtcaccatcaccatcaccaCGAGTCAACGAAGTCCCGCCCAGAGTCGCCCGTCAGTGATCCTCAACCCAGTCCGCAGGAGTGCCAGCAGGATTACCCGCAGGACTGCAGCCAGAAGTCCCCGCAAGAATGCCTTCAGGAGGAGATCCCCCAGGACTGCTCCAAACAGAACAATGACCAGAGCGGCTACGAGAGCCAATCGTCCGGCGTCTCGGACAACCTCGAGAAGAACAGCTCGACGCCGCTTAACGCATCCAAGAGCTCCAGTGGCAGCGCTGGTGTCAGCAGCGCCAACACCTCGTCTGCCAACGAGGCATCACGCTCGCGCAGAACGTCGCCCCGGTCGTCACCCGGGCCCACCGGCACCGAGACACCCTTCAAGTGCCACCTCTGCGATAGCGGCTTCTCCGAGCGCCAAGACTGTCTGGACCACATACGCGACATCCACGAGAGCGAGTTCCAGCTACTCGTGACCAAGGGCGCTCTCGACATGGACATCGACGAGGAGCCCATGCCGCCCGTGCCACCCCCGCCCAGCGATGGTGAGGAGAGACGCGGAAAGTTCCCGGACTACAGCAACAGAAAGGTGATCTGCGCGTTCTGCATGCGGCGCTTCTGGTCGGCCGAGGACCTGCGCCGCCACATGCGCACGCACACGGGCGAGCGGCCGTTCTCCTGCGACATCTGCGGCCGTCGCTTCACCCTCAAGCACAGCATGCTGCGCCACCGCAAGAAGCACGACTCGATCGACTCGAGCATGTACGTGGGCACGAGCGGCGACGAGGACAACGGCACCGGCACCGGTGGCGCAGCATCCTCCTCGTCGGTCGCACAACCGCCGACGATAACGCCCCGACACCACTCCGGTGCCAGTGTGAGCGGCGTCTCCACGAGGCTGCAGGAGCGCAACTCCTTGCCACAGGTGGCGAGCGTTGCGACCGGTGACGCGGCGCCCAGCGGACTCATGCGGTTCAATCCGTACGAGAAGCTGACGACGCTGACGGGCAAATTGACGACGAGCTCGAATCTGATGGTCGACGCCAACGACAACACTGACAACGATCTCATCTCTAACCTGCTGGGAATCCGGGACAAGAGCATCATCGACCGCGTGCTGCAGGCGCCCGACGACGCGGCCAAGCTTCTTGGCGTCAAGGGTAGCGGCGAATGA
Protein Sequence: MSDVAVVHRPPAIGMDFSMKVTAETGPDQRDGCNERQTDVASPLVSSEQPEGSHPCPACPLVLATLRDLTHHLRGHNSPRSTDCSGEEVDYACGVCHKVLSSASSLDRHVLVHSGERPFKCKHCDMAFTTNGNMNRHLRTAHHRGASPSHSCTDSEGGSSDSERPLVKRRLIQEEYNNNEISKRKSPDLLEKKLRSPEISKRKCPDYADEADSQRRHKVLLNDSRSAIKGAYTEQSIQNYNCTVCGRQDFTSSAMLDAHYETSHPDSPVRCEPCNESFKNHRALSLHRYMTHHNDQQRNDIAVPRHLRNSVVGFNDLTFMDFSAGKFPAIARAVCEQSLHRPASGETPKYQCSKCLRAFPCQSALDGHETDCGQPTTEQRMMHDDHSMRNDFFAGLDLQNKAALAEAKEGKDLADIQSIISSVSSGPILQNFSRSDASTPDNCKIKQSFGSSGSSGTPSSEFHEEEAQDAFAAEFRKMKMKGEFPCRLCTAVFPNLRALKGHNRAHMNIPPGMAYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSILIYHPSEDSTNDGNLESSSPRLIRDEVRKSLVYPERDELPSQPMHYPEIRIKDEAKLRQPVLPGLHAIGMNHFEKSELFTRPPTMQPLELTYRTEELEKAHQMKQHLEDDMDDERSSDGSVSLVTDTKADLSAVATSAVHQRTQAGPIDLKKSDDTKESASPAMTGTGEDAPLDLSMDVLDLSKKESAKLAAAAAAAASLAAANKERESSNDISSNFEEQLQANQKELYNTTNLLTSLFKAGQVGADSFTNYANQMLYRSLPFPGVGAGFLQPYMYPHLLSQDLAMKDRLQKELVRGLQTSGGSLVERPTPNYAAAFPQNPRSSLNQVNDQVTEYASMMSSKLMNKPMTSRERTETSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCAARFTLRSNMERHIKQQHPQHWCQRPRGAHSTRGRPPANPPTLLHSLTQSQSHQTMSQYPTLLPKLNSSLNSDYGKHAISDEVKYAILAQQLKGNKPEENDTDEELIIDEESANQEKEARAREPTERTLSLLRGKLEANIESKANEDLEIKESRVSDELKDKLKEKLENHLEYNDHDEERDLKMEDESGESDCEKVEPRDFVKTEMDEDVKEENNEDLASVSELLDNASQNYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSFNSGNSGSSTSKKKKKMKKKKKKKSAYSLAPNRVICPYCSRPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNAVQKLHHPRTRSTSSPEPTESTPPTCGNNNSSTASQFAMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHAYHHHHHHHESTKSRPESPVSDPQPSPQECQQDYPQDCSQKSPQECLQEEIPQDCSKQNNDQSGYESQSSGVSDNLEKNSSTPLNASKSSSGSAGVSSANTSSANEASRSRRTSPRSSPGPTGTETPFKCHLCDSGFSERQDCLDHIRDIHESEFQLLVTKGALDMDIDEEPMPPVPPPPSDGEERRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICGRRFTLKHSMLRHRKKHDSIDSSMYVGTSGDEDNGTGTGGAASSSSVAQPPTITPRHHSGASVSGVSTRLQERNSLPQVASVATGDAAPSGLMRFNPYEKLTTLTGKLTTSSNLMVDANDNTDNDLISNLLGIRDKSIIDRVLQAPDDAAKLLGVKGSGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01465648;
90% Identity: iTF_01465648;
80% Identity: -