Basic Information

Gene Symbol
CFAP44
Assembly
GCA_030522985.1
Location
JAPYZP010003077.1:805-12013[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 3e-05 0.007 18.6 1.3 1 23 269 291 269 291 0.95
2 11 1.1 2.4e+02 4.3 0.2 1 20 298 317 298 321 0.86
3 11 0.066 15 8.1 3.7 1 23 370 392 370 392 0.95
4 11 9.2e-05 0.021 17.1 0.5 2 23 541 562 540 562 0.97
5 11 7.8e-06 0.0018 20.5 1.2 1 23 567 590 567 590 0.96
6 11 2.6e-05 0.0059 18.8 0.4 1 23 623 645 623 645 0.97
7 11 2e-06 0.00046 22.3 0.8 1 23 655 677 655 677 0.96
8 11 7.4e-06 0.0017 20.5 1.2 1 23 683 705 683 705 0.99
9 11 3.7e-05 0.0085 18.3 0.2 1 23 711 733 711 733 0.98
10 11 1.9e-05 0.0044 19.2 2.6 1 23 739 761 739 761 0.98
11 11 0.0014 0.33 13.3 0.3 1 21 767 787 767 788 0.94

Sequence Information

Coding Sequence
ATGGAGCCGAACGTCTACGGTAGCCGGGCCGATCATCATCAccagcaccaccaccagcaTCCTCATAATCTGATGGAGAACGGGTTGGGGACTGAGTGGACCTGTAGGCTCTGCTCCAGGAGGTGCACAGGGGATACGAGGCACTGGGGACTCTTCGAGGAGGCGGACCTCGCACAGAAGCTCATGGCGTTCGCCGCTGTACAGgtTCAGGAAAATGATGGATTACCAACCATTGTTTGTACAAACTGTAGGAGCTTAGTTTTCATGGCTTATGATTTCAAGTGTCAAGTAGAGAAAAGTGACCATGACCTACGTCAAGCACTCCTCATGAGACAACCAACATTACACTGGCCTATCATTCCATATGATAAATCTAGTGAAAATCTAAGTATAGTAGAAACTATGGTACCTTGTCTCCAAAAAAGTATTGATAATTGTATCACATTTCAAGATCAAACAGTAAATAGTCATGaacaatttatatttgaaatcgCAAATAGTTGTAATATTGCTAGTGAAACTTCCAGAACAGAAAATCAAATGCACTCAAGTCATTTAGAAGCAAATAACGTAATAGCAGAAAACAATTCTATATCTTTTCAAATTGCTAATGCTGTTTCTGAAAGTGAAAGCAATGGAGGAGACCCCACTATAACATTTGAAGCACACTATGAAATgaagaatgaaataataatgaaacaagataaagataatacaaatataaaatcaaaCGATCCTCATGAAATTTTGAATCATAGCGATGATAGTGATGAAAAGCCTCTAATTTTACGAAAACAAAAACGTTTCACGTGCAATCATTGTGTAAAATCTTTTTCTACTTTGTCATTATTAGAAAAACATGCAGTTATTCATAGAAGATTTGAAATACATTATCTGTGTTTTTTATGTGATGAACAATTTTCTACAGTTGAGAAAGTCAAAAGTCACGCAGTAGAAATTCATAATATGCAGATGGATAAAGAGAAAATACTGCAAAGTACTAGAATGCGAAGGATAACTGGCTGGATTAAAAAGATTGATGATCAAGATAGTAATAAAGAAAGTGATCCTTTAGCAGAtgatgcaaaagaaaataaaaattctaaatttctttgtaaattttgttgtaGGCCGTTTTCTTCTCAAAAAGCGTATTCTGCTCATCTTAGAACTCATCCAGATTATAAagataaaatgttaaatgaatTAAACAAAGGTCCGGTAACAGATGCTATTTCTGAtccagaaataataaaaaatatttctcaatcATCTGATATGAATATTGATCTTCAAATGAGGCACACAGAAGATATttctcatataataaatatggaATCTACTTCTCATCACGAAATCACTGAAATTGCTCCTTGTACAGAAAATCGAAAAGTTCCTCATCAGATAACAAACCAGGAAAATACTGTATCACAAAATCAATTGCATGTTGAAGATACTGGTggcaaaaataatatagttcACTCTGAAGATGatcgtgatgatgatgattatgatgatgataatgataatgatgatgataatgatgatgatgatgatgaagatgaagatgatTATCTTGATGAGAGCAATGATAAAGAAGATATGCTTTCAGCAAATATACAATGTAACAAATGTGGTAAACTTGTTGCAACTGAAAGAAATCTTAAAAGGCATCTTTTGACACATTCAGGGCTTAAGTATAGATGTTCAATCTGCAGTAAAGAATTTTCTAGACCAGACAAACTTCGGGAGCATCAGCAGCTTAAACATAAAGAAGAAGTATTTGGCAAATCAGATTCAGAAAATGAATCCTCAGATGATAACGGTCAAGAAATGAATTCAAAAAAGGATAAAAGCCATCGACCTTACAAATGTTCAATATGTCCTAAAGCATTTGTACAATCACAGTCATTAAGTAATCATGAAGAAAGGCATAAACGTGGTCGAGATGTTCAAAAACGCTATTTATGTGAAGTTTGCAGCAAATGTTTTGCCCAAAGTGGATCATTGGTAGCACACATGCGCACACATACAGGTGTAAAACCATATGTTTGCAATGTATGCAGTAGAGCTTTTACCAAAAGTACATACTTGCAGTTACATCTCAGAACACACAGCGGAGAAAAACCATACATATGTCAGTATTGCAGTAGAGCTTTTGCTCGAGCAAATACATTAGCAAGGCACATAACTATGCATACAGGAGAAGCTAAATATCAATGCCAAATTTGCACAAAATCCTTTAGAAGACTGACATCTTTGAATgagcatacatacacacatacaggcCAAAGACCATATGCTTGTAAAATTTGCTCAAAAAGGTATAACAATGCTGGATCATTATATGCTCACACCAAAAAATGTAAAGCTTCTCAAGAATCTCAGGAAGTAAAACAATTTTCAGTTGCTCTTAATCCAAGTGATAATAATAGTCCAGTTAGTACTATACAAAGTGACAAGGATTTACCAGCAGATCTCATTATTTTCACTGAGATGAGTAGAGATGAGACAATAACAGACGAATCATTAATTCCTGAACCTCCAACATGCCAATTTATAGTTACAGATATTCATAGTGAAAAGTCAATGTCAAACAACATTCTTGAGCAATTTACTGTTCAAGAACCTGATGTTTTCAATATGAATGAAAAGCAATTTAAGACACCCTACTATGGATTATATCCAActGAAGAAGGCTACGAGacattaaatgaaaatcatgtATGTCAACGTCTAGAAGAAATTACAAGTAGTGCATTTATATGTGCTCGTGAAAAGATTCTCACAGTCTTACAAAAAGATGCAGataataatgaaTACGACGAGTTTGGCGAAGACTACGACGGGGAAGAGTCCCGACCGTCTACAACGATATCATATCACTCGGAAGATTTCATATCCAAACCCAAAGTTTCGGAGGATGGAACGATACCGTTCAATATTTTGGAATTCGATCACTCGTTTGGTTACGATTGCCGCAAACGCTTCAACCTCTGCGTGGCTGATCCCGACACTTTGATTTTCGCTTCGGGCAATTTGATTCATTTCTTCAACGTAGCGCGAAATACGCTTACGTTCAGACGATGTTCTACGAGCGGCGGTATTGGTCACATAACCAAAAATCCAACGTTCGATCATATTGCGATCGGTGAAAACGGAGTAAATCCACCCATAATCATCTACGAGTGGCCGAGCATGGAAATCGTTACCGTTTTACACGAGGGTACCACGCGTTCGTTTTCTTACTTACGATACAGTCCAGATGGTCTGCAGCTCGTCTCACAGGGCGGCGACCCGGACTACCTCATAACCGTGTGGGACTGGCAGCGCTCCAAGATCGCTCTGCAGTGCAAGTCCCACGGCCAGGACGTGTTCAACGTCGTGTTCTCGCCGACGATGGAGGGCCGGATGACATCCAGTGGCGCTGGTCACATCAAGTGTTGGAAGATGTCCAAGACGTTCACCGGACTGAAGCTTCAGGGTGAGCTCGGCAGATTCGGTAAGACCGAGATCTCGGATATCGTCGGTGTTTATCCGATGGCGGATGAGAAGATTATTTCTGGGTCCGAGTGGGGAAATATTCTGGTGTGGAACGAGGGCCTGATCAAGATCGAGGTGTGCAGGAAGAACGGACGGCCCTGCCACGAGAGTTACATATCGCAGTTCGAGTTCATAAACGGCGAGCTCATATCAGtcgGCACTGATGGTTACATAAACGTGTGGTATTACGAGACGATCGACCAGGCGGAGCCAACGGAGGACAGCCACTTCATCGAGGTAGAGCCGATCTACGAGTTCAGTATCACAGGCCCAACAGACGGCAGCAATAGCAGCTTGTCTAATCGACGTGCCATGCTCATGCAAATCCTGAAACAGAACATCAACGACGTCGATAGTACGTTCTGGTACGCTCAGGACGGTAACGGCGGGATATGGCGGATCGAGCTGTCCACCATGCAGACGCCAAAATTCTCGGAGAAGCTGCTCACCTGTCACGCGGGTCCCATCGCAGACATGGACACGGCGGATTGGGGCCCCTACGCGGTGACCATCGGTCAGGACGGCTGTTTACACGCGTACAATTATCAGGAGAAGAGGTTGTTGCTGACGCACCAGTTCCACGACGTCGGTTCCTGCGTTGTCTGGTTACCGAGTTCTGTAGAGTCCAGCGGGAAGACGCTCGTTTGCGGGTTTCGCAGTGGCGTGGTGAGGATGGTAAGCATAGATTTAGGAGGTATCGAGAAGAAGAATGATAAAGTGGCCTGGTTGACGCAGGCTGTCAAGCCTCACACGAAGAATATTACCCGTATGACGATAAATCCTTCAAATAGgGTACTGGTAACTGGAAGTGAAGATTTGACTATTTTCGCGTTTTACATTGAAGTTTTCGAATCCCATCCCAATTTGGTTCCTATAGGATATGTGGAAGTGCCGTCGAGTGTGACTTTTCTGACTTGGAAACCAAatcatccTTTCACGATATTCGTCGGATGTTTGGAAGGAGATTGCGTGCAAGTTGATATTCCGGGGGAACCACAGGATTACACAACTATTTCTTACAAATTGACTCGCTGCCAGCCAACAGTGTTCAAGTTCGAATCTGTAAAGTCGTCGATACTAAGGGAGCAAGCCCGTTTGGAAATCGAGCAGATGAGACAGCAAAGAATGGCCGAGAAGAAGGAAGAGCTGAGGATATTTAAGGAAAATAATCCTGGAGTAGATGTTGATGAAGAACTTTTTTTAGAGGCGGATATGGAGGACGAAGTTCCGCTACCTGAACTCTACGTACCAGAAGTGCCAAATCGAGTTTTAGTAGTTTTTTATACTGCGAATGATACTGTGGTATTATCAATGTCTGGTTACGACGCCGGATACGCGTACGAGTATTCCAATCCCGAATTCAATAAAGAAACTCTTTTGTTAAGAAGTAACTACGTTGCTGATTGTGATGACGAGGAGATTCGAAGTTACTTATTTTATAATGATAGAAAATACGTAATTTTTGGAATGGAAAATGGTGAAATTCGCGTATGTAAGGTGAATCCAGatgatgaaattgatttttcggATTATTGGATCCTACCGATGCACGATAATTTCAACGGTTATATACCAAGTATGCGTTTGAGTTACGATCGGAAAATGCTGCTCACTTGCGGACACGATgggaatattttttctttcactaTCAATGACGATTCTCCAGTACCAATAGTCGAAATTCCTGAGGTCGACACAACTACACCAGTACCGACCGATGTTGCAGACATTGAAGAGTTGGATTATCCAAGTTTAGAACAGGTTATTGTACAGGCCGAGGAAAATCGTATCATGGCTAATGCGAAAGATGAGAAGCAAAAAACTCTTGCGATTCTGCGGGATTTGACTGAAGAgtataattcaattttgaaaaggTTTTATTACTAA
Protein Sequence
MEPNVYGSRADHHHQHHHQHPHNLMENGLGTEWTCRLCSRRCTGDTRHWGLFEEADLAQKLMAFAAVQVQENDGLPTIVCTNCRSLVFMAYDFKCQVEKSDHDLRQALLMRQPTLHWPIIPYDKSSENLSIVETMVPCLQKSIDNCITFQDQTVNSHEQFIFEIANSCNIASETSRTENQMHSSHLEANNVIAENNSISFQIANAVSESESNGGDPTITFEAHYEMKNEIIMKQDKDNTNIKSNDPHEILNHSDDSDEKPLILRKQKRFTCNHCVKSFSTLSLLEKHAVIHRRFEIHYLCFLCDEQFSTVEKVKSHAVEIHNMQMDKEKILQSTRMRRITGWIKKIDDQDSNKESDPLADDAKENKNSKFLCKFCCRPFSSQKAYSAHLRTHPDYKDKMLNELNKGPVTDAISDPEIIKNISQSSDMNIDLQMRHTEDISHIINMESTSHHEITEIAPCTENRKVPHQITNQENTVSQNQLHVEDTGGKNNIVHSEDDRDDDDYDDDNDNDDDNDDDDDEDEDDYLDESNDKEDMLSANIQCNKCGKLVATERNLKRHLLTHSGLKYRCSICSKEFSRPDKLREHQQLKHKEEVFGKSDSENESSDDNGQEMNSKKDKSHRPYKCSICPKAFVQSQSLSNHEERHKRGRDVQKRYLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYQCQICTKSFRRLTSLNEHTYTHTGQRPYACKICSKRYNNAGSLYAHTKKCKASQESQEVKQFSVALNPSDNNSPVSTIQSDKDLPADLIIFTEMSRDETITDESLIPEPPTCQFIVTDIHSEKSMSNNILEQFTVQEPDVFNMNEKQFKTPYYGLYPTEEGYETLNENHVCQRLEEITSSAFICAREKILTVLQKDADNNEYDEFGEDYDGEESRPSTTISYHSEDFISKPKVSEDGTIPFNILEFDHSFGYDCRKRFNLCVADPDTLIFASGNLIHFFNVARNTLTFRRCSTSGGIGHITKNPTFDHIAIGENGVNPPIIIYEWPSMEIVTVLHEGTTRSFSYLRYSPDGLQLVSQGGDPDYLITVWDWQRSKIALQCKSHGQDVFNVVFSPTMEGRMTSSGAGHIKCWKMSKTFTGLKLQGELGRFGKTEISDIVGVYPMADEKIISGSEWGNILVWNEGLIKIEVCRKNGRPCHESYISQFEFINGELISVGTDGYINVWYYETIDQAEPTEDSHFIEVEPIYEFSITGPTDGSNSSLSNRRAMLMQILKQNINDVDSTFWYAQDGNGGIWRIELSTMQTPKFSEKLLTCHAGPIADMDTADWGPYAVTIGQDGCLHAYNYQEKRLLLTHQFHDVGSCVVWLPSSVESSGKTLVCGFRSGVVRMVSIDLGGIEKKNDKVAWLTQAVKPHTKNITRMTINPSNRVLVTGSEDLTIFAFYIEVFESHPNLVPIGYVEVPSSVTFLTWKPNHPFTIFVGCLEGDCVQVDIPGEPQDYTTISYKLTRCQPTVFKFESVKSSILREQARLEIEQMRQQRMAEKKEELRIFKENNPGVDVDEELFLEADMEDEVPLPELYVPEVPNRVLVVFYTANDTVVLSMSGYDAGYAYEYSNPEFNKETLLLRSNYVADCDDEEIRSYLFYNDRKYVIFGMENGEIRVCKVNPDDEIDFSDYWILPMHDNFNGYIPSMRLSYDRKMLLTCGHDGNIFSFTINDDSPVPIVEIPEVDTTTPVPTDVADIEELDYPSLEQVIVQAEENRIMANAKDEKQKTLAILRDLTEEYNSILKRFYY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-