Basic Information

Insect: Torymus sinensis
Gene Symbol: -
Assembly: GCA_030522985.1
Location: JAPYZP010000885.1:815-4260[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00034 0.078 15.3 4.0 1 23 233 255 233 255 0.98

2 11 0.031 7.2 9.1 11.8 1 23 261 283 261 283 0.95

3 11 0.00012 0.028 16.7 6.8 1 23 289 311 289 311 0.99

4 11 5.3e-05 0.012 17.8 1.0 1 23 317 339 317 339 0.95

5 11 7.8e-06 0.0018 20.5 1.1 1 23 345 367 345 367 0.97

6 11 7.5e-05 0.017 17.4 0.4 1 23 373 395 373 395 0.97

7 11 7.1e-05 0.016 17.4 1.7 1 23 400 422 400 422 0.97

8 11 4.9e-06 0.0011 21.1 0.0 1 23 428 450 428 450 0.96

9 11 0.00085 0.2 14.1 0.4 1 23 463 485 463 485 0.98

10 11 2.2e-06 0.00051 22.2 2.0 1 23 551 573 551 573 0.97

11 11 3.6e-05 0.0082 18.4 4.6 1 23 583 605 583 605 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00034	0.078	15.3	4.0	1	23	233	255	233	255	0.98
2	11	0.031	7.2	9.1	11.8	1	23	261	283	261	283	0.95
3	11	0.00012	0.028	16.7	6.8	1	23	289	311	289	311	0.99
4	11	5.3e-05	0.012	17.8	1.0	1	23	317	339	317	339	0.95
5	11	7.8e-06	0.0018	20.5	1.1	1	23	345	367	345	367	0.97
6	11	7.5e-05	0.017	17.4	0.4	1	23	373	395	373	395	0.97
7	11	7.1e-05	0.016	17.4	1.7	1	23	400	422	400	422	0.97
8	11	4.9e-06	0.0011	21.1	0.0	1	23	428	450	428	450	0.96
9	11	0.00085	0.2	14.1	0.4	1	23	463	485	463	485	0.98
10	11	2.2e-06	0.00051	22.2	2.0	1	23	551	573	551	573	0.97
11	11	3.6e-05	0.0082	18.4	4.6	1	23	583	605	583	605	0.97

Sequence Information

Coding Sequence: ATGTGCACCACACCCGGGAACACCGGAACCGGGTTTGGCTATGCCACATGGTCATTCAGCGGACCTAGTAATGATAGTCGAGAGAACACCCAAAGCGACATTGCCGGAACCATCAGCTATGCAGCAGTCAACAACAACCAGGATCAAGGATCCAATAGTAGTAAAATACAAATCGATGTCAAGCCAgctaaaatacaaaatagtGCCCATAGAAGAACCATGTTTACCATGAACGAAAGCTGCCAGCAGACACCCACAACTACTCATCATGGTCACAGCACAGGAGCTCATAATCAAACTACCCATGTTACTCACGTCAGGTCCAAGAAGCATCATGATGTTTTTGCACTAACGTGCGACAAGGGAGGTTGCAATTGTGACGCACATCACTCTACACCACCACCTTCCCTTTTTCCAAATACACTAGTTTTTGCTACAGATAAACATACCATGAGCAAGCACTTCATGACTCCAATCGGTCCACTTCAACTCACAGCTGAAGAATGCAACGAAATCCTCATGAAGAGAGCAGCTGCTGCTTCTAGCCAGTCTAATTCTAATAATGTGGCATCCAGTCAGACGGATGCAGCATCTCACTTTGGCCATGTTTTAACTCATGTAAATACAACACAGTTAGATTTGAAAACCAAGCAACAGGATATAGGGTCCCAAGTTCGCGTACCTAAGGAAAGGCCATACTCGTGCACAGAGTGTGGAAAGTCCTTTTTACTAAAGCATCATCTCACTACACACGCAAGAGTACATACGGGGGAACGGCCTCACATTTGCGTGCACTGTGGCAAAAGTTTTGCGCACAAACATTGTCTCCATACTCATCTTCTTCTCCATAGCGCAGAAAGACCCTTTCAGTGTAGGGAATGTAAAAAGTCTTTCACATTAAAACATCACTTGGTGACACATACTAGAGTACATACAAGAGAACGGCCATTTGTTTGCCCTGAATGTGGTAAAGCCTTTCCTCTCAAGCGTCACCTTGTGACACACAGTAAATTCCATACAGGAGAGCGTCCCTTTGTTTGTGAAGAGTGTGGTGAATCATTTGCCCAGAGGGAACATCTTACCATGCACTCTCGCTTCCACGGCAGTTTGCATCCATTTGTCTGTCCTGATTGTAGCATGAGCTTCCAGAGAAAGTTCGAGCTAGTTAACCACGGCCGACTGCATGGTAGGATACCACACTCTTGTACAGTCTGTGGAAAGGAATTTCTGCAGAAAAGAACTTTAATGGCACACATGCGGTTACACACTGGGGAAACACCTTTTGCATGCACAGTATGCGGAGAAGCTTTTCCAAGGAAGTCTGATTTAATAGCCCACTCCAAGATACATAATAGCAGTAATAATTCTGATTCAGATACGAAACCATTCACATGTCGAGAATGTGGTCTAGAATTCAATAACAGGGAAGCCCAGACATTGCATTTAAGGTTACATTCAGCAGATAGAACACTTGTGACTGATCTTTGTGGACTTGCAGCCACATTTCAACAAACAACAGGACACTTTCTTACAGCTAACACCTCTAGTGCTCACCAGATGAACGGACCGCTGGGCTCGGCGAGCGTGAGTCACATGCACGGCGCCACGCAGACCTCACCACCGGTGAGTTCGGGTCCAAAGCCCAAGCCCCACATCTGCCCGGACTGCGGGCGAGGCTTCGCCCAGAAGCATGGACTCTCGCAGCACCAACGGCGGCACTCGGACGGTAGCTGCCACATCAGGTCGCACGTGTGCGACAAGTGTGGCAAGGCCTTCTTCCAGAAGAACCACCTGCTGCTCCACCAGCGCCAGCACATGGATCCCCCGCCGAGCATACTGCGCCAGCAGCAGCGCCAGGCGGCTCAGGCGGCTGCTCAAGCCGCGCAGCAGGCTGCCAGTGGCACCACGCAGGTGATTACCGTCGACGGACAGACCTGCAACGTCGACACTAAGTCGATAGCTCTGCAGGCCATCCAACAGCAAGTGCAGGCGCAGCAGGCCGCGCAAGAGGCTGCCGCCCGACAGCAGGCGGCTCAGCAGCAGGCGGCGCAACAACAGgccacgcagcagcagcagcaacagcaggcaCAGCAGCAAcaagcgcagcagcagcaagcgcaacaacaacagcagcagcagcagcaagcgcaacagcagcaacaagcGGCTCAACAGCAGGCGGTGCAACAACAAGCGGCAgcgcaacagcaacagcaagcggcagcgcaacagcagcagcaagccACGCAGCAGCAGgcgcaacaacagcagcagcaacagcagcaagcGTGTTCCGTGGATACAAAAGCAATACAGTTGAACGTCACCATGTGA
Protein Sequence: MCTTPGNTGTGFGYATWSFSGPSNDSRENTQSDIAGTISYAAVNNNQDQGSNSSKIQIDVKPAKIQNSAHRRTMFTMNESCQQTPTTTHHGHSTGAHNQTTHVTHVRSKKHHDVFALTCDKGGCNCDAHHSTPPPSLFPNTLVFATDKHTMSKHFMTPIGPLQLTAEECNEILMKRAAAASSQSNSNNVASSQTDAASHFGHVLTHVNTTQLDLKTKQQDIGSQVRVPKERPYSCTECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLHTHLLLHSAERPFQCRECKKSFTLKHHLVTHTRVHTRERPFVCPECGKAFPLKRHLVTHSKFHTGERPFVCEECGESFAQREHLTMHSRFHGSLHPFVCPDCSMSFQRKFELVNHGRLHGRIPHSCTVCGKEFLQKRTLMAHMRLHTGETPFACTVCGEAFPRKSDLIAHSKIHNSSNNSDSDTKPFTCRECGLEFNNREAQTLHLRLHSADRTLVTDLCGLAATFQQTTGHFLTANTSSAHQMNGPLGSASVSHMHGATQTSPPVSSGPKPKPHICPDCGRGFAQKHGLSQHQRRHSDGSCHIRSHVCDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQAAQQAASGTTQVITVDGQTCNVDTKSIALQAIQQQVQAQQAAQEAAARQQAAQQQAAQQQATQQQQQQQAQQQQAQQQQAQQQQQQQQQAQQQQQAAQQQAVQQQAAAQQQQQAAAQQQQQATQQQAQQQQQQQQQACSVDTKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00144040;
90% Identity: iTF_00464131;
80% Identity: -