Basic Information

Insect: Torymus sinensis
Gene Symbol: -
Assembly: GCA_030522985.1
Location: JAPYZP010007335.1:1283-5584[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.9e-06 0.00091 21.4 1.4 1 23 147 169 147 169 0.98

2 15 8.5e-05 0.02 17.2 0.2 3 23 177 197 176 197 0.99

3 15 0.0001 0.023 17.0 0.1 1 23 285 307 285 307 0.98

4 15 0.0081 1.9 11.0 0.2 1 23 313 336 313 336 0.97

5 15 0.00067 0.15 14.4 1.7 1 23 364 386 364 386 0.97

6 15 2.3 5.3e+02 3.3 0.0 1 23 401 423 401 423 0.86

7 15 0.055 13 8.4 0.2 2 23 430 452 430 452 0.95

8 15 0.12 27 7.3 1.7 5 19 463 477 460 481 0.90

9 15 0.00026 0.059 15.7 3.5 3 23 489 509 487 509 0.97

10 15 0.019 4.3 9.8 0.1 3 23 516 536 515 536 0.97

11 15 1.1e-05 0.0025 20.0 0.4 1 23 545 567 545 567 0.98

12 15 0.0047 1.1 11.7 0.2 3 23 575 595 573 595 0.97

13 15 0.0042 0.96 11.9 0.2 3 23 603 623 601 624 0.94

14 15 0.073 17 8.0 0.0 1 23 638 660 638 660 0.92

15 15 0.0094 2.2 10.8 0.0 1 20 1101 1120 1101 1123 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.9e-06	0.00091	21.4	1.4	1	23	147	169	147	169	0.98
2	15	8.5e-05	0.02	17.2	0.2	3	23	177	197	176	197	0.99
3	15	0.0001	0.023	17.0	0.1	1	23	285	307	285	307	0.98
4	15	0.0081	1.9	11.0	0.2	1	23	313	336	313	336	0.97
5	15	0.00067	0.15	14.4	1.7	1	23	364	386	364	386	0.97
6	15	2.3	5.3e+02	3.3	0.0	1	23	401	423	401	423	0.86
7	15	0.055	13	8.4	0.2	2	23	430	452	430	452	0.95
8	15	0.12	27	7.3	1.7	5	19	463	477	460	481	0.90
9	15	0.00026	0.059	15.7	3.5	3	23	489	509	487	509	0.97
10	15	0.019	4.3	9.8	0.1	3	23	516	536	515	536	0.97
11	15	1.1e-05	0.0025	20.0	0.4	1	23	545	567	545	567	0.98
12	15	0.0047	1.1	11.7	0.2	3	23	575	595	573	595	0.97
13	15	0.0042	0.96	11.9	0.2	3	23	603	623	601	624	0.94
14	15	0.073	17	8.0	0.0	1	23	638	660	638	660	0.92
15	15	0.0094	2.2	10.8	0.0	1	20	1101	1120	1101	1123	0.94

Sequence Information

Coding Sequence: ATGGATGTCGGTGGGGACTTGACCCTACAATGGGTGGAAGAAGTAGGCAATGTTATTCACGAGGAGGTAATATGTGGCCTGGAAGCAGAGCTCGATGCTCCTGTAGAGGAGGTGGTGGGAGCATGCGAAGAAGTCACAGTAGAGGAGACTGTGGAATCTGTGCCAGAGGACTCTACGCCCATGACAGATACAGAAATCCTCATGGTACCACAAACCAGCGATATGGAGTCTATTTATATAGTTCCGCAGGACCAGGGCCATGACTATCTCAATATTCAGGTCACTGAAGAAGTGATCACTGATAACTGGGACAGATCTGGTCCGGATGATGGAATGGAAGTTCCAGAAACTAAAGTTTCACATGACAATTTACTAGAATACGACGATATGGAAATACCTTTGCCAATAGATCAAGATTCTTACACAAACACAAGACCTTACCCATGTGATTTTTGTAGTAAAAGATTTAGGAAAAAGGCAAATCTCATGAATCACATGGTAACACATCAAACAGAGCGTCCTCATGGGTGTAATTTGTGTGGTGCTCGTTATGTAAGAAAGTCTGATTTAATGAATCATTTAAAAATCCATGCTTATGCCCCTACAAGAGATGGTTTGGAAGATGATCTAGAAGATCCTTTAGCAACTGAAGAGGAAGAGAATCAACCTGTAAAGGGACGTCGTAAGAAAGTACAGGCAAATGTTCCTAGGAAGCGTAAAGCTCCTCCTCCAGGAGCTAAGCGGCAAGTAGTTGATACTTCTGCAAAAATGGATACAAGCAAGTGGACAGCTCAGCTAACAACCAATGAACCTCAGGTGCCTCGCTGGCCAGTTACAGATGCTACAAAGCCATATGTGTGCCAGTTTTGTGGAGTAAGTTTTGCAAGAGAAAAAGCCTTAGCATCCCATGCTCGTATTCATGGTGGAGACAGCCCATTTGAGTGCACGTCTTGTGGGGAAATGTTTTGGGATGTTAATACACTTCAGGATCATATGAAAGTTAAACATGGTATGGGAATAGCTCAGTCTGACCAggaagaaattgaaaatgaaacatcAAACTATGCTGGTGATCAGAGGTTTGGTGAATTTTTCTGTGACACTTGTGGGGTACCTTTCCACAGAATAGATCTTTTAAAACGCCATCGAAAaattcacATAAAACAAGAAGTTGATACAATGGAAGGTTCCAGTCAACACCACGTTTGTAATGTATGTGGTGAATGGTTTGAAGAAGCTTTAGCACTTTTGGCACACGCTGAATTACACGCtagGTCACCTAGCCGAAGGTGTTTATTATGTGGCGAGAGGTGTAGAGATGATGCTGAACTTGCGGAACATGTTCGCGAGATTCATGCGGAAGATGCACCTGCGAACACATGTATTTTATGCGGAAAAACTTGTAAAGATAAGAGAAGTTTGTTAAAACATTCATGGATACACAATACAGATAAGACATTTGGTTGTACCAAATGCGGAAAACGTTTCCATAGTAAAGCTAGATTACGGAGACACATGGTGTCACATCGCAATAAAATGGTCGCTTGTGATGAGTGCGGCGAGGAGTTCCCCGATGGCAGAGCTCTAGTGAGCCATCGTCACTCGCACAACAAAGATTTGGGCGGACGTACGTTTCCCTGCCGTGAGTGCGGTAAAACATTTGGTAGCCGCAGCTCGCAGCAAATACACATTCGTATTCACACCGGTGAGAGGCCTTACGGCTGTCGCTTCTGTTGGAAAGCCTTCGCAGATGGTGGTACCCTTAGAAAACACGAGAGGATACACACGGGAGAAAAGCCCTATGGCTGTGCTATTTGTCCTCGTGCTTTCAATCAAAGAGTTGTTCTTCGAGAGCACGTGAGAGCTCATCATTCAGGTCCAGATCCAAAGTGTCACAACAGTATGACACCTTATTTATGCAAAGTTTGCGGTGACACGCTACCGACTTCCGATGAACTCGTTGCCCACATCGTCGCGCATTGCGACGAGAATACAGCGATGCGTCGCCAGCCGCAGTCAGGCCCGCGAAAATACAAACGCCGACGTAAGCTAAAGAACGATAACGCTACGTCCCTTACGCCGTCTCGCGTTAACGAGTCCTTTGACATGATAGACGCCCCCTCGGACTCTGATGAAAACACTAAGCGCAAGCTCGGCAAGAAAACCAAACGTTCAAACGTGGAAGAGGGATATCAAAATGTACTGAAGAGTTTCGAAAGCTCTCTGCAAAATATTAACTCGATTGTTAGCAATTCCAAGACGCATCCAACGAAGACGAAAGCCGGCAAAAAGAAAGTAAAGAAGGATGAAAAGAAGGGTGCTGCGGCTGCGGCAGCAGGAGCTGAGCCGCCCTCGTCGAATCATCCAGGCAGACCAAAGATGATTCACACGCAAAAGACGCGTGTGCCCGTGGAAATGGGCACAGATGGTGTTAAAAAAGGTCAAAAGACGAAGACAATGGTGACGAGAACGCCCAAGGTTATGCCAAACGAGCAGCAAAGGGTGCCAGGCGCTCCTACCGGTGGCGAAAGGAACAGACCGCGCACGAAAAACGTCAGCTATCACGTGGAAGGTAGACAACAGTTTATACCAGCCACCTTCCCCAAGCCAAAGGACGATGATCTGATCAGAGAATCGGTCGAGGTGCCGACCATCGAGATGGTCAACATCAAAATCGAACCCGGATtacaaaaaatgaatatgaaTCAGAACCATGCCCCTAATAATAATGGCAACTTGGTTGATTTCGTGGAGAGTAAACAGGAAAAAGTAAAAGCACCGGCCAAGAGACGCGGGCCTGTAAAGAAAACCAAAAGGAGAACGGCCGCGGCGACGAGAAGGTCGAAAGATGCAGCGgcagcagtggcggcggcggcagcggcatcAGCAGCAACGATGACACCCGTCATGCAGTCATCTATCGATCAGAGTATAGAGGATATCGTGAGGCAACATGATCACCATCCGCAGCATGATCTACTGATGCATGAGCCACTGCAGGAGCAGGTGGATCAACAGGTGCAACCAACGCAGCTCTTCGAGTCTGTTGTCGATGGTAACAATCTCGAGGTCGCTTTTGAGGCAAATATTGTCACTGAACCAGACGACATGGTGCAGGAGTCCATACTGCCGGATCTGGACAAAGTGAATCACGTGGAGGAAATCAGTTCGGGGGATGCTGGTAACGTTAAGCTCAGCGTTAAAGTCGAATCGGCGCCAGACGGCATGCTCGACGTGCACAGTTTGATTGGCTCGGTCGAGGAATCGGTGCCCGAGACCATTATACCCGACGCGGTCGAGTACACGTGCGAGATGTGCGCGGCGGTGTTCACGACGCGCGCCGACCTCCTGGTGCACGTGCCCGTACACATTTGA
Protein Sequence: MDVGGDLTLQWVEEVGNVIHEEVICGLEAELDAPVEEVVGACEEVTVEETVESVPEDSTPMTDTEILMVPQTSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGMEVPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSKRFRKKANLMNHMVTHQTERPHGCNLCGARYVRKSDLMNHLKIHAYAPTRDGLEDDLEDPLATEEEENQPVKGRRKKVQANVPRKRKAPPPGAKRQVVDTSAKMDTSKWTAQLTTNEPQVPRWPVTDATKPYVCQFCGVSFAREKALASHARIHGGDSPFECTSCGEMFWDVNTLQDHMKVKHGMGIAQSDQEEIENETSNYAGDQRFGEFFCDTCGVPFHRIDLLKRHRKIHIKQEVDTMEGSSQHHVCNVCGEWFEEALALLAHAELHARSPSRRCLLCGERCRDDAELAEHVREIHAEDAPANTCILCGKTCKDKRSLLKHSWIHNTDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKDLGGRTFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHNSMTPYLCKVCGDTLPTSDELVAHIVAHCDENTAMRRQPQSGPRKYKRRRKLKNDNATSLTPSRVNESFDMIDAPSDSDENTKRKLGKKTKRSNVEEGYQNVLKSFESSLQNINSIVSNSKTHPTKTKAGKKKVKKDEKKGAAAAAAGAEPPSSNHPGRPKMIHTQKTRVPVEMGTDGVKKGQKTKTMVTRTPKVMPNEQQRVPGAPTGGERNRPRTKNVSYHVEGRQQFIPATFPKPKDDDLIRESVEVPTIEMVNIKIEPGLQKMNMNQNHAPNNNGNLVDFVESKQEKVKAPAKRRGPVKKTKRRTAAATRRSKDAAAAVAAAAAASAATMTPVMQSSIDQSIEDIVRQHDHHPQHDLLMHEPLQEQVDQQVQPTQLFESVVDGNNLEVAFEANIVTEPDDMVQESILPDLDKVNHVEEISSGDAGNVKLSVKVESAPDGMLDVHSLIGSVEESVPETIIPDAVEYTCEMCAAVFTTRADLLVHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01219230;
90% Identity: iTF_01469933;
80% Identity: -