Tsin011874.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus sinensis
Gene Symbol
-
Assembly
GCA_030522985.1
Location
JAPYZP010008056.1:1-7197[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 8e-06 0.0018 20.4 1.0 1 23 143 165 143 165 0.98
2 30 0.0034 0.79 12.1 1.9 1 23 188 211 188 211 0.96
3 30 0.00017 0.039 16.2 0.5 2 23 218 240 217 240 0.96
4 30 0.0005 0.11 14.8 0.3 1 20 260 279 260 281 0.94
5 30 0.14 32 7.1 0.0 2 23 391 412 390 412 0.95
6 30 0.024 5.6 9.5 0.3 1 23 418 441 418 441 0.87
7 30 0.00015 0.035 16.4 0.1 1 23 511 534 511 534 0.96
8 30 0.059 14 8.3 0.2 1 23 540 563 540 563 0.94
9 30 0.28 63 6.2 1.5 1 23 576 598 576 598 0.97
10 30 4.3e-05 0.0099 18.1 0.6 3 23 644 665 642 665 0.96
11 30 1.3 2.9e+02 4.1 0.5 2 23 728 751 727 751 0.93
12 30 4 9.1e+02 2.5 0.0 2 23 760 782 760 782 0.84
13 30 0.25 58 6.3 0.1 2 23 789 811 788 811 0.93
14 30 1.7e-05 0.0038 19.4 1.2 1 23 819 841 819 841 0.98
15 30 0.00027 0.062 15.6 3.3 1 23 918 941 918 941 0.97
16 30 0.0019 0.43 13.0 0.5 2 23 948 970 947 970 0.95
17 30 0.0009 0.21 14.0 4.8 1 21 1005 1025 1005 1026 0.94
18 30 0.0034 0.79 12.2 1.8 2 23 1040 1061 1039 1062 0.93
19 30 0.32 75 5.9 3.7 1 23 1065 1087 1065 1088 0.96
20 30 0.01 2.3 10.7 0.9 2 23 1095 1118 1094 1118 0.93
21 30 1.2 2.8e+02 4.1 0.2 2 23 1126 1148 1126 1148 0.95
22 30 3.5 8e+02 2.7 0.0 2 23 1155 1177 1154 1177 0.87
23 30 0.29 66 6.1 2.7 2 23 1186 1208 1186 1208 0.96
24 30 0.33 77 5.9 0.8 2 23 1214 1236 1214 1236 0.93
25 30 0.034 7.9 9.0 0.1 1 23 1302 1325 1302 1325 0.96
26 30 0.016 3.6 10.1 2.5 1 20 1354 1373 1354 1375 0.94
27 30 0.41 94 5.6 1.9 2 23 1467 1489 1466 1489 0.94
28 30 1.6 3.6e+02 3.8 0.2 2 23 1496 1518 1495 1518 0.93
29 30 0.22 50 6.5 1.8 1 23 1529 1551 1529 1551 0.97
30 30 0.0041 0.93 11.9 0.2 3 21 1560 1578 1559 1579 0.93

Sequence Information

Coding Sequence
CAGTCGAAGCCGACGATAAAGCAGGAGGAGATCGAGGTGTCGGAGGAGCCGTACTCGGAGCTACGTATGGAGCTGCTGAAGCAACAGAAGCAGGAAAAAGGCAACGGCGCGCCTACGTCGATGATGATACCCGAGGCGCCAGTCGTCAACCCAAACGCGGCCCTCGGCACTCCGCCACGGCTCAAGTCGGATGGCGAGCACGAGCCCGAGGGCCGCGACAGCGAGAGACACAGCAACGACGAAGCGGGCATGGGCGACCAGGACGACCGCAAGTCGGACGATTACGAGATGGACATGGAGATGAACCCGAGCGACTTCCTGGAGATGAGCGCCGTCGTCTCGGAAGAGGACACCCACGCGTTACCTCAGCCTCTGCCACAGCACGACACCGGTGTGTTTCAGCATCGCAACGAGCAGCACGAGGTCTACGTCTGTTCGCTCTGCAACAAAGCCTTCAGCTCGAAAGGCCATCTGTCGCTGCACGCGCGCATACACGTGGGCGCCGGCGATGTCATTGGCGAGAAGGTGATCACGGATGATCACACGTCCTACAAGAGGCCCTACCAGTGCGATCTCTGCAACAAGTCGTACTCGACGGCCAAGCATCGATGGGGACACGTGTCCACGACGCAtagGGGCCATCCCGCAGTGACGTGTGGCTACTGTTCGCGCATCTACTCGACGCGCACGAACCTCGAGGAGCACATAAAGTCGCGGCACGCGGGCATGCCGCCACCTTCGGAGATGCCCGTGTCCTACGTGCAACCCGAGTCGCGCTTCCAGTGCAAGACCTGTCCCAAGATGTACACGAATGTCACAGATCTCAACAAGCACGCAAAGGCCTGCCTTGGCGTGCAGCAGCGCAAAGagcaccagcagcagctcgcCAACAACAGTTTTAATGCCCAGAACTTCGCGAAACTTAAAAATGCTCTGGAACCGGGTATCTCGGATATGTCCAGCGTAGATTCGGATTATGAGAACAAAGATTACAAGAGCGCTGAGGCGAAACTTGCCAAAAATCCTCAGTTGACTATTCTGAAGCAGGCTCTGATAAAGGGTGACAGTGCGAAGAAGGAATACGAGGAGAGACAGAAAATGTTGAGCAAACAGAAGAAACAAGCCAATATGTCTCACAAAGAATCGATTGAATCAGAAAACAAGAGATGGTACTGCGAGGCCTGTCCCTTGAACTTCGGCACAGTTGACGAGCTCAGGCAGCACGAGAAAATTCATGATGCCGAGAAGCCTTTCGTCTGCATTCTATGCCAGAAGGATTTCAGTCTGAAGTCGTCCTTGAGCAGGCACATAGTTGCGTCGCACGGTGTAGACCCGACGCCGTTGATCGAGAGCGACAAGTGTCTGAAAAAATCCGTGCAGGAGAGCAACATGCAAGTGCCACTCATCAAGGAGGAACAGAACATTACCAAAGATAATTCCATGTCGCCATTTTCTACCGATAACATGGATAATGATGACGAAGAGGAGCATGAGAACGGAACCGACAACATGCTCGAGGTGGAGACAGTCTTCGTTTGCGAAATTTGCACGCGCGACTTCAATGATCGAGCCTCGCTCTGGCTCCACATACGTGCCACCCACAAAGAATACGCAGCTTTTGCTTGCGGAATCTGTCTGAAAATCTGCGCGGACAATACGCAACTTCTCAGTCACGTCGCTATGTACCACGGAGGCGCGAAACTCCTCATGTCTGAGCAGAGAAGGTACAGCTGTACGGTATGCGGCCGACAGCATGATTCTCGCAAGAAGCTCATAACCCACGTCTCCATTCACAACATCGATCCTGGCTACGACCCGGCGAGTTTCGTTCAGCTCAATACCAACTACTATGGGGATAATATGAACAGCAACGAAACTGGTAACGATGGCCTGGTCATGGACTGCGAAGACGAAAGTGAGAAGATCGATTGTTACATCTGCTACAAATCCTTCCCCAGCGAGGATCACCTCATTCGTCATCAGAGAAATGCTCACAAAACCGAACAGATGGTCCCGGTGGGTGAATACGGACCCAATAGTGGACAACCCGGGCAGAACGGTACGCATAGCCGAGCGCAGTATCATTTGTTCTTTATCTGCGAGCTGTGCGGAAGCTCGCATCCTAGCAAATGGGAACGTTGGCTGCACGTCAGCAGTATGCACAATAATGAAGCGTCTATCAGGTGCGAGCGTGACGACTGCGCCAAGATCTTCGCGACGAAAGCCCTGCGCAACGAGCACGCGCAGCACCACCAGCTGCAAGGCAGCTCGCCCAACACCTGCGAGATCTGCGGCAAGCTGTGGGGTAGCCGCGTCGACTACTGGAAGCACGTGATGGGCGTACACGCGGACACTGTGCCACTCATCTGCGGCGTTTGCCTCAAGGTCTTCCCCGATGTGCTCCAGCTCAGTCAGCACGTCAAGCTCAAACATTGGCCACTGACCAACGGCGACTTTAGCTGCGACATCTGCGGTAGACCCTACTCGAATAAGAGCAAGATGTCGAGGCACAGAAAGATTCACGGATTGGATGGGGAACCATATAACCCAGCGGCAACCAATAGCAGTCTAATTATCAATGACGCCTCCACGGGCGACATTCCTGGTCTCCCAATGCCACTGCAACTGGACAACGGCATGCCACAATCGATGGAGCCATCGCCAAACAATCTGAGTTGCGACATGTGCGGTGATCTCAAGTTCCCCTGCCTTGAGGATCTATGCAATCATCGTCGTATGGCGCACAACCTCTTCCCTTGCGACTTGTGCAACAAATGTTACGGTCGTACCTCACACCTCTGGAAGCACGTGAACCGTGTACACAAGGGCCATGAGGATGTCACCTGCAAGTACTGCCTAAAGACGAGCGCGTCGAAGGAACATCTGGCTGCACACATTGCCAAGATCCATCGGTACGAGCCCGAGGTAAAAATCGAGCGCGATGTGACTAGCTACAAGACCAGTACGTACAGCGCGGCTGCAGCTGCGGCAGCAATTGAGGAGGATGGATTGCACTTCTGTGAGAAGTGTAATAAATCGTTCCACAAGAGGTACCTGCTTAGAAGACACATGAAGGGCTGTCAGAATTACAGAAAGGACCCGGGCGCGTTGCTGACGCGATGCAGAGCTTGCGAACGGATCTTTAAGGATCGAGCAAGTTTGCAGAAGCACATAGAGAATCATCACACGTCGTATCAGTGCCACCTGTGTAAGGAGACTGTCACATCGAAACTTGGAATCATGACGCACAACCGCATGCATCACATGCACCATCCGGAGCTGACATGTGAACTGGAGAACTGTCGGAAATTGTTCAGGACGAAAGAAGACCTTGAATCCCATCGTAAAGACCACAAACACCACGGCAGCCCGAATGTCTGCGACTTTTGTGGTGACACCGTCGAGAATAAACTCAAGCTTAAGATGCATATCCTGAGCCTGCACAGGAACGAAATCGGCGTCTCCTGCGGCGTCTGCTTGATTCCCATGAAAGACCCGAAGGATCTTAAGCGACACGTTGAGGACGTCCACGACAGTGTCTTACTCAAGCCCAACACGTGCCAGGTATGCGGTAAACAGTACGCCTCCAAGTGGAAGGCGTTCGACCACACGAAAAAGTGCCACGGCAAGGTGTTCCGCACGTGTAAGCAGTGCCTCGCGGTATTTACCTCCGACGAGGATCTCCGCTACCATTACGAGCACATTCACAACATTCCCAAGGATCAGCTCGACGCGTTCCAGTACAGGCTCGAGGTAGCCGGTAACAAGATGGATGATTACGATCTCGGTCCATTAGAGGTTGTTGTTAAAGAAGAACCTGAGGAGCTTGACTTTGAAGAAGATGCCTTCGACGATGATAATGGTAACTCGAATGATTCGAAGAGGCGACGGTCTACCGATACCTACGACTGCGAGATCTGCCCAGAGATGTTCCTGAACGAGGAGCTGCTGTCCTCGCACTACCGCAACGTGCACAACACGGATCCCCAGAGGATATTCAAGCGCATGAAGCTGGAGATATCGAACAAGTTGAAGAAGAAGACACGAGAGAGGGAAAACTACGAGTGCAAGAATTGTCAGAAGCAGTTCTGCACTAAACCTCTGTATCAGGACCACGTGAGTCAGTGCACACGCAAGTCTATGCCGCCCACGACGTCGATTCTTGAGGCACATCTGAAAAACAACAACCAGATCAAGCGCGAGGAGCCCGAGCCCATCGTCTGCGAGACAAACTTGAATATCCCCGATTTCAATCTCTTTGAGGATATTAACATGCAGTTGTCGGGGCAGAAGCCTGTACCGAGCCTCATGCCATTAGGTGGGCATTCTTCCAAGTCGTCCAAGTACTCGAGGAAGGACTCGCGTAAGGTTTATGATGAGTCGACAAATACTGAATGCACGTGTGAGGTGTGCGGCAAGCAGTGGCCCGCGAAGAAGCATCTGTGGCAGCATCTGATCCGCTTCCACAGATCCGAGGCCGCCGTTACCTGCGGTGTATGTTTGAAGCTCTGCGCCACGTATGACGACTTGGCGGAGCATCTGACGAACATCCATCCATCGATTCTCAGTACGACCGGCAACAACTTCACGTGCAAGATATGCGGAAGGTATCATAACGCCCGCAGCAAACTTCTACTGCATATGAGTATTCACATAAACTGCAAGACCAACAATATGTGCTCGAGATGTAACAGGAGCTTTGAGAACGAAGACAAGCTGAAGGAGCACATTGCCACGTGCATGGGCGCGAGGGAGGAAGGCCAAGGCGTCGATGCCGAAGTGCAGCCTATCAAGGAGGAGAACGAGGAGAAGGGAAGCCTTATCGGAGATGAGGAAGAACCCGAGGAGAATGAGTACGAGTCTGATGAAGATAACTCGGGAGACAGTAGCTCCGACAAATCTAACGATTCTGATAACAGCAGCAGTAATAGCAATACTGACAGCTCCAGTGACGATGATGACAACAGCGATGATGATGAAGAGGATGGCCGATCCCGAAACATCGAGGAAGACAGCAGTAACAGCAAGGATTCTGACAACGCGGAAGAACCCCAGCCTGTTGCCGTGAATACCGCGGCAGTCGAGCAGCGTCAGATGTTAGAAGAAAACGAAACTATGAGCCTCGgcgaggaggacgaggaggaggaggaggaagatgaCGAAGACATGGAGGATAAAGCGCGCTACGAGGCCATGTCTGAGTCCGAGGAGGAGAACCACGATGAGTACCTGAAAAAgcagcgccagcagcagcagcgcgagatCGAGAACCGTTACGAGCAGACGCCCCACAAGGAACCTATGCTCGTCAACTACTCCGACGACGAGGGTCCGCCAGCTCTCAGTCCTATGCTACCCGTCGTCATGAAAGAAGCCCCACCCAGCGACGAACCCGACAGCCAAGACGAGGATGACCTTGGTGGCAGTCGGGCGCGTACAATCAGCGACTCGCTTAGTAAGAAGGACAAGAGCGATGAGAGTGAGGACGATAGCAGTGAGCCTGAACAGGAGGAGGAAGACTCCGATGAGGATGACGAGGAGGATGCGATTCGTAGGCAGGCTCAGGTCGTCGACCCCAACAGCGCCTTCCATGCGGACAATACGTCGCGCAGCAGCAACGAAGGTGATTCATTGTTGTCTTACGTATAA
Protein Sequence
QSKPTIKQEEIEVSEEPYSELRMELLKQQKQEKGNGAPTSMMIPEAPVVNPNAALGTPPRLKSDGEHEPEGRDSERHSNDEAGMGDQDDRKSDDYEMDMEMNPSDFLEMSAVVSEEDTHALPQPLPQHDTGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGMPPPSEMPVSYVQPESRFQCKTCPKMYTNVTDLNKHAKACLGVQQRKEHQQQLANNSFNAQNFAKLKNALEPGISDMSSVDSDYENKDYKSAEAKLAKNPQLTILKQALIKGDSAKKEYEERQKMLSKQKKQANMSHKESIESENKRWYCEACPLNFGTVDELRQHEKIHDAEKPFVCILCQKDFSLKSSLSRHIVASHGVDPTPLIESDKCLKKSVQESNMQVPLIKEEQNITKDNSMSPFSTDNMDNDDEEEHENGTDNMLEVETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGICLKICADNTQLLSHVAMYHGGAKLLMSEQRRYSCTVCGRQHDSRKKLITHVSIHNIDPGYDPASFVQLNTNYYGDNMNSNETGNDGLVMDCEDESEKIDCYICYKSFPSEDHLIRHQRNAHKTEQMVPVGEYGPNSGQPGQNGTHSRAQYHLFFICELCGSSHPSKWERWLHVSSMHNNEASIRCERDDCAKIFATKALRNEHAQHHQLQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVLQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEPYNPAATNSSLIINDASTGDIPGLPMPLQLDNGMPQSMEPSPNNLSCDMCGDLKFPCLEDLCNHRRMAHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCKYCLKTSASKEHLAAHIAKIHRYEPEVKIERDVTSYKTSTYSAAAAAAAIEEDGLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHTSYQCHLCKETVTSKLGIMTHNRMHHMHHPELTCELENCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKRHVEDVHDSVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRYHYEHIHNIPKDQLDAFQYRLEVAGNKMDDYDLGPLEVVVKEEPEELDFEEDAFDDDNGNSNDSKRRRSTDTYDCEICPEMFLNEELLSSHYRNVHNTDPQRIFKRMKLEISNKLKKKTRERENYECKNCQKQFCTKPLYQDHVSQCTRKSMPPTTSILEAHLKNNNQIKREEPEPIVCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGGHSSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRSEAAVTCGVCLKLCATYDDLAEHLTNIHPSILSTTGNNFTCKICGRYHNARSKLLLHMSIHINCKTNNMCSRCNRSFENEDKLKEHIATCMGAREEGQGVDAEVQPIKEENEEKGSLIGDEEEPEENEYESDEDNSGDSSSDKSNDSDNSSSNSNTDSSSDDDDNSDDDEEDGRSRNIEEDSSNSKDSDNAEEPQPVAVNTAAVEQRQMLEENETMSLGEEDEEEEEEDDEDMEDKARYEAMSESEEENHDEYLKKQRQQQQREIENRYEQTPHKEPMLVNYSDDEGPPALSPMLPVVMKEAPPSDEPDSQDEDDLGGSRARTISDSLSKKDKSDESEDDSSEPEQEEEDSDEDDEEDAIRRQAQVVDPNSAFHADNTSRSSNEGDSLLSYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01465616;
90% Identity
iTF_01466513;
80% Identity
-